Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 2
- mitochondrion 1
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY32692 | Canola | peroxisome | 95.48 | 95.75 |
| CDY28679 | Canola | cytosol | 63.28 | 85.17 |
| CDX74298 | Canola | plastid | 79.38 | 79.38 |
| CDX91947 | Canola | plastid | 78.25 | 78.47 |
| AT5G58680.1 | Thale cress | cytosol | 78.25 | 77.59 |
| KRH15451 | Soybean | cytosol | 57.63 | 75.28 |
| Solyc12g088360.1.1 | Tomato | cytosol | 58.47 | 75.27 |
| Solyc04g077850.2.1 | Tomato | cytosol | 74.29 | 73.88 |
| KRH05594 | Soybean | cytosol | 73.45 | 73.86 |
| PGSC0003DMT400027542 | Potato | cytosol | 73.45 | 73.03 |
| PGSC0003DMT400030161 | Potato | cytosol | 71.75 | 70.95 |
| KRH52088 | Soybean | cytosol | 61.58 | 66.67 |
| VIT_18s0001g09130.t01 | Wine grape | cytosol | 69.77 | 63.66 |
| GSMUA_Achr4P03430_001 | Banana | cytosol | 47.74 | 62.83 |
| GSMUA_Achr6P07710_001 | Banana | cytosol | 58.19 | 57.7 |
| GSMUA_Achr3P18890_001 | Banana | cytosol | 57.91 | 57.1 |
| Os07t0587500-01 | Rice | cytosol | 57.06 | 55.8 |
| Zm00001d021978_P001 | Maize | cytosol | 56.78 | 55.52 |
| EER97464 | Sorghum | cytosol | 56.5 | 55.25 |
| Zm00001d006726_P001 | Maize | cytosol | 55.65 | 54.72 |
| TraesCS2D01G194400.1 | Wheat | cytosol | 55.65 | 54.57 |
| TraesCS2B01G213900.1 | Wheat | cytosol | 55.65 | 54.57 |
| TraesCS2A01G193000.1 | Wheat | cytosol | 55.37 | 54.29 |
| GSMUA_Achr10P... | Banana | cytosol | 56.78 | 54.03 |
| GSMUA_Achr4P10960_001 | Banana | endoplasmic reticulum | 56.21 | 49.01 |
| GSMUA_Achr4P14130_001 | Banana | cytosol | 47.74 | 48.7 |
| GSMUA_Achr7P26200_001 | Banana | extracellular, golgi | 54.52 | 46.62 |
| GSMUA_Achr5P16030_001 | Banana | cytosol | 56.21 | 42.25 |
| Os03t0435300-00 | Rice | cytosol | 42.94 | 38.0 |
| CDX90518 | Canola | plastid | 47.18 | 36.7 |
| CDY09688 | Canola | cytosol | 46.61 | 36.34 |
| Zm00001d003967_P001 | Maize | plastid | 45.2 | 35.56 |
| CDY25764 | Canola | cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole | 35.31 | 21.26 |
| CDY21412 | Canola | cytosol, endoplasmic reticulum | 36.44 | 21.22 |
| CDY04746 | Canola | cytosol, endoplasmic reticulum | 36.44 | 21.18 |
| CDX74050 | Canola | cytosol | 27.12 | 21.05 |
| CDY12497 | Canola | cytosol | 35.03 | 20.77 |
| CDY08002 | Canola | cytosol | 26.55 | 20.66 |
| CDX76873 | Canola | cytosol, plastid | 42.94 | 20.35 |
| CDY71737 | Canola | cytosol | 26.55 | 20.35 |
| CDX72769 | Canola | cytosol | 35.03 | 20.26 |
| CDY28059 | Canola | cytosol | 26.27 | 20.13 |
| CDX78262 | Canola | cytosol | 39.83 | 20.09 |
| CDX96295 | Canola | cytosol, plasma membrane | 34.75 | 19.97 |
| CDY02891 | Canola | cytosol | 40.68 | 19.54 |
| CDY64696 | Canola | cytosol, extracellular, mitochondrion, plastid | 40.4 | 19.38 |
| CDX73449 | Canola | cytosol | 38.42 | 19.32 |
| CDX78273 | Canola | cytosol | 34.46 | 19.24 |
| CDY68352 | Canola | cytosol | 24.58 | 19.08 |
| CDY18649 | Canola | cytosol, plastid | 37.85 | 18.82 |
| CDX81323 | Canola | cytosol, plastid | 38.14 | 18.67 |
| CDY57440 | Canola | cytosol | 34.46 | 18.51 |
| CDY31736 | Canola | cytosol | 33.33 | 18.38 |
| CDY38506 | Canola | cytosol | 23.45 | 18.2 |
| CDX77213 | Canola | cytosol | 32.77 | 18.04 |
| CDX68379 | Canola | cytosol | 33.33 | 17.93 |
| CDY12838 | Canola | cytosol | 35.31 | 17.88 |
| CDX86080 | Canola | cytosol | 33.05 | 17.84 |
| CDY68037 | Canola | cytosol | 32.77 | 17.71 |
| CDX99112 | Canola | cytosol | 32.77 | 17.71 |
| CDX95193 | Canola | cytosol | 32.49 | 17.56 |
| CDX68380 | Canola | cytosol | 24.29 | 16.17 |
| CDX94661 | Canola | plastid | 29.66 | 14.77 |
| CDX70810 | Canola | cytosol | 19.49 | 14.62 |
| CDY46092 | Canola | endoplasmic reticulum, golgi, plasma membrane, plastid | 42.66 | 14.62 |
| CDX90186 | Canola | mitochondrion | 29.1 | 14.45 |
| CDY48332 | Canola | mitochondrion, plastid | 28.53 | 14.35 |
| CDY37666 | Canola | cytosol, plastid | 26.55 | 14.22 |
| CDX99816 | Canola | plastid | 28.81 | 14.09 |
| CDY43686 | Canola | plastid | 26.27 | 14.07 |
| CDY43332 | Canola | mitochondrion | 28.53 | 14.05 |
| CDY38931 | Canola | cytosol | 24.29 | 13.98 |
| CDY51235 | Canola | extracellular, golgi | 20.34 | 13.87 |
| CDX73439 | Canola | plastid | 34.46 | 13.54 |
| CDY04747 | Canola | cytosol, golgi | 15.82 | 12.7 |
| CDX71307 | Canola | cytosol | 23.16 | 12.18 |
| CDY31406 | Canola | cytosol | 23.16 | 12.17 |
| CDY54132 | Canola | cytosol | 22.03 | 11.47 |
| CDX93411 | Canola | mitochondrion | 22.32 | 11.32 |
| CDY24520 | Canola | cytosol | 21.47 | 11.28 |
| CDY55050 | Canola | cytosol | 22.03 | 11.21 |
| CDX70805 | Canola | cytosol | 21.75 | 5.0 |
| CDY51234 | Canola | cytosol | 21.75 | 4.65 |
| CDY04344 | Canola | cytosol | 0.56 | 0.63 |
| CDY04342 | Canola | cytosol | 0.56 | 0.6 |
Protein Annotations
| Gene3D:1.25.10.10 | MapMan:35.1 | InterPro:ARM-like | InterPro:ARM-type_fold | InterPro:Armadillo | EnsemblPlants:CDY02828 |
| ProteinID:CDY02828 | ProteinID:CDY02828.1 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | EnsemblPlantsGene:GSBRNA2T00115018001 |
| InterPro:IPR000225 | InterPro:IPR011989 | PFAM:PF00514 | PFscan:PS50176 | PANTHER:PTHR23315 | PANTHER:PTHR23315:SF64 |
| SMART:SM00185 | SUPFAM:SSF48371 | UniParc:UPI0004EC7B92 | SEG:seg | : | : |
Description
BnaC02g10610D
Coordinates
chrLK031937:-:686772..688000
Molecular Weight (calculated)
38559.3 Da
IEP (calculated)
7.854
GRAVY (calculated)
-0.283
Length
354 amino acids
Sequence
(BLAST)
(BLAST)
001: MENRTGLTYM NRKLSGLSVT DDSSSAFSDC NSDRSGEFPP SSSENRRLFL YRAAENPDDL IRYLVSHLDS SSSSIDEQKQ AAMEIRLLTK DKPENRIKLA
101: RAGAIKPLIS LVSSSDPQLQ EHGVTAVLNL SLCDENKELI ASSGAIKPLV RVLKSGTPTA KENAACALLR LSQIEDNKIA IGRSGAIPHL VNLLETGGFR
201: GKKDAATALY SLCSAKENKT RAVESGVMKP LVELMADFDS NMVDKSAYVM NLLMSAPESK PAVVEEGGVP VLVEIVEVGT QRQKEMGVSI LLQLCEESVV
301: YRTMVAREGA IAPVVALSQS SKSRAKLKAE ALIELLRQPR QQQQQQQRLD SNRS
101: RAGAIKPLIS LVSSSDPQLQ EHGVTAVLNL SLCDENKELI ASSGAIKPLV RVLKSGTPTA KENAACALLR LSQIEDNKIA IGRSGAIPHL VNLLETGGFR
201: GKKDAATALY SLCSAKENKT RAVESGVMKP LVELMADFDS NMVDKSAYVM NLLMSAPESK PAVVEEGGVP VLVEIVEVGT QRQKEMGVSI LLQLCEESVV
301: YRTMVAREGA IAPVVALSQS SKSRAKLKAE ALIELLRQPR QQQQQQQRLD SNRS
001: MEMENHRPGS FTYMGRKFSD LSLNDDSSAF SDCNSDRSGE FPTASSESRR LLLSCASENS DDLINHLVSH LDSSYSIDEQ KQAAMEIRLL SKNKPENRIK
101: IAKAGAIKPL ISLISSSDLQ LQEYGVTAIL NLSLCDENKE SIASSGAIKP LVRALKMGTP TAKENAACAL LRLSQIEENK VAIGRSGAIP LLVNLLETGG
201: FRAKKDASTA LYSLCSAKEN KIRAVQSGIM KPLVELMADF GSNMVDKSAF VMSLLMSVPE SKPAIVEEGG VPVLVEIVEV GTQRQKEMAV SILLQLCEES
301: VVYRTMVARE GAIPPLVALS QAGTSRAKQK AEALIELLRQ PRSISNGGAR SSSQL
101: IAKAGAIKPL ISLISSSDLQ LQEYGVTAIL NLSLCDENKE SIASSGAIKP LVRALKMGTP TAKENAACAL LRLSQIEENK VAIGRSGAIP LLVNLLETGG
201: FRAKKDASTA LYSLCSAKEN KIRAVQSGIM KPLVELMADF GSNMVDKSAF VMSLLMSVPE SKPAIVEEGG VPVLVEIVEV GTQRQKEMAV SILLQLCEES
301: VVYRTMVARE GAIPPLVALS QAGTSRAKQK AEALIELLRQ PRSISNGGAR SSSQL
Arabidopsis Description
ARM repeat superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q9SGH8]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.