Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Os07t0587500-01 | Rice | cytosol | 57.0 | 62.98 |
| GSMUA_Achr4P03430_001 | Banana | cytosol | 37.75 | 56.13 |
| Bra040513.1-P | Field mustard | cytosol | 33.75 | 51.33 |
| CDY28679 | Canola | cytosol | 33.5 | 50.95 |
| KRH15451 | Soybean | cytosol | 34.25 | 50.55 |
| GSMUA_Achr10P... | Banana | cytosol | 46.25 | 49.73 |
| GSMUA_Achr6P07710_001 | Banana | cytosol | 44.0 | 49.3 |
| GSMUA_Achr3P18890_001 | Banana | cytosol | 43.0 | 47.91 |
| Solyc12g088360.1.1 | Tomato | cytosol | 31.5 | 45.82 |
| KRH05594 | Soybean | cytosol | 39.25 | 44.6 |
| CDY32692 | Canola | peroxisome | 39.25 | 44.48 |
| CDX74298 | Canola | plastid | 39.0 | 44.07 |
| Bra001006.1-P | Field mustard | plastid | 38.75 | 43.79 |
| Bra020360.1-P | Field mustard | cytosol | 38.5 | 43.63 |
| GSMUA_Achr4P10960_001 | Banana | endoplasmic reticulum | 44.0 | 43.35 |
| CDX91947 | Canola | plastid | 38.25 | 43.34 |
| GSMUA_Achr4P14130_001 | Banana | cytosol | 37.25 | 42.94 |
| CDY02828 | Canola | cytosol | 38.0 | 42.94 |
| KRH52088 | Soybean | cytosol | 34.25 | 41.9 |
| Solyc04g077850.2.1 | Tomato | cytosol | 37.25 | 41.85 |
| PGSC0003DMT400027542 | Potato | cytosol | 37.25 | 41.85 |
| AT3G01400.1 | Thale cress | cytosol | 37.0 | 41.69 |
| PGSC0003DMT400030161 | Potato | cytosol | 36.0 | 40.22 |
| AT5G58680.1 | Thale cress | cytosol | 35.75 | 40.06 |
| GSMUA_Achr7P26200_001 | Banana | extracellular, golgi | 41.0 | 39.61 |
| GSMUA_Achr5P16030_001 | Banana | cytosol | 46.5 | 39.49 |
| VIT_18s0001g09130.t01 | Wine grape | cytosol | 35.5 | 36.6 |
| Os07t0584900-01 | Rice | plastid | 34.5 | 29.55 |
| Os06t0726900-00 | Rice | cytosol | 22.0 | 23.16 |
| Os12t0570000-01 | Rice | cytosol | 28.5 | 22.05 |
| Os02t0488600-01 | Rice | cytosol, nucleus | 21.0 | 19.86 |
| Os06t0102700-01 | Rice | plasma membrane | 27.5 | 18.21 |
| Os02t0732200-01 | Rice | cytosol | 26.0 | 16.33 |
| Os02t0234300-01 | Rice | cytosol | 23.0 | 15.83 |
| Os04t0348400-01 | Rice | cytosol | 18.0 | 15.69 |
| Os08t0110500-01 | Rice | plasma membrane | 32.0 | 15.53 |
| Os03t0275900-01 | Rice | cytosol | 27.5 | 15.15 |
| Os08t0481200-01 | Rice | cytosol | 24.0 | 14.95 |
| Os01t0884400-01 | Rice | plasma membrane | 31.25 | 14.92 |
| Os05t0476700-01 | Rice | plastid | 25.0 | 14.77 |
| Os01t0823900-01 | Rice | plastid | 24.75 | 14.56 |
| Os08t0415600-00 | Rice | cytosol | 22.5 | 12.55 |
| Os09t0378700-00 | Rice | plasma membrane, plastid | 21.0 | 11.8 |
Protein Annotations
| Gene3D:1.25.10.10 | MapMan:35.1 | UniProt:A0A0P0VZU6 | InterPro:ARM-like | InterPro:ARM-type_fold | InterPro:Armadillo |
| ProteinID:BAS84838.1 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | InterPro:IPR000225 | InterPro:IPR011989 |
| EnsemblPlantsGene:Os03g0435300 | EnsemblPlants:Os03t0435300-00 | PFAM:PF00514 | PFscan:PS50176 | PANTHER:PTHR23315 | PANTHER:PTHR23315:SF64 |
| SMART:SM00185 | SUPFAM:SSF48371 | UniParc:UPI000393AF7A | SEG:seg | : | : |
Description
Similar to exodeoxyribonuclease V. (Os03t0435300-00)
Coordinates
chr3:+:18367213..18369983
Molecular Weight (calculated)
40346.7 Da
IEP (calculated)
9.082
GRAVY (calculated)
-0.336
Length
400 amino acids
Sequence
(BLAST)
(BLAST)
001: MESDASTSPR RSDSSDSSTC SDGDDLLSSS SPKGTGIHRL PPLPCATDGA IAALVEELES PASSLDDLRR AAMELRLLAK HSPDNRLRIV AAGALPPLVA
101: LLSRPDPLLQ EHGVTALLNL SLREDNRGAV VDAGAVGPLV RALRSAASPA ARENAACTLL RLAQLDGSAA AAIGRAGAVP VLVSLLESGG ARGKKDAATA
201: LYALCSGAPE ENGPRAVEAG AVRALLELMG EPERGMVEKA AYVLHALVGT AEGRAAAVAE GGVPVLVEMV EGGTPRHKEM ATLCLLHTAT MEAVSRGGGG
301: IGAAEEATTR RGEAGWRRRR RRRHGGEASD GSGGGGGGEA SGGGGGGGGE AGRRRGRHER RLGAERRRWG RRRRGGSGGE AVGGGTTSPR GGERGGGGGX
101: LLSRPDPLLQ EHGVTALLNL SLREDNRGAV VDAGAVGPLV RALRSAASPA ARENAACTLL RLAQLDGSAA AAIGRAGAVP VLVSLLESGG ARGKKDAATA
201: LYALCSGAPE ENGPRAVEAG AVRALLELMG EPERGMVEKA AYVLHALVGT AEGRAAAVAE GGVPVLVEMV EGGTPRHKEM ATLCLLHTAT MEAVSRGGGG
301: IGAAEEATTR RGEAGWRRRR RRRHGGEASD GSGGGGGGEA SGGGGGGGGE AGRRRGRHER RLGAERRRWG RRRRGGSGGE AVGGGTTSPR GGERGGGGGX
001: MANHNSFTYM DHSFSDISLN FDSSAFSDCN SDISCEFPTT TSESRQRKLF LSCAVDNSDD VIRNLITHLE SSSSIEEQKQ AAMEIRLLSK NKPENRIKLA
101: KAGAIKPLVS LISSSDLQLQ EYGVTAVLNL SLCDENKEMI VSSGAVKPLV NALRLGTPTT KENAACALLR LSQVEENKIT IGRSGAIPLL VNLLENGGFR
201: AKKDASTALY SLCSTNENKT RAVESGIMKP LVELMIDFES DMVDKSAFVM NLLMSAPESK PAVVEEGGVP VLVEIVEAGT QRQKEISVSI LLQLCEESVV
301: YRTMVAREGA VPPLVALSQG SASRGAKVKA EALIELLRQP RQQQQQQQHF ESNDNER
101: KAGAIKPLVS LISSSDLQLQ EYGVTAVLNL SLCDENKEMI VSSGAVKPLV NALRLGTPTT KENAACALLR LSQVEENKIT IGRSGAIPLL VNLLENGGFR
201: AKKDASTALY SLCSTNENKT RAVESGIMKP LVELMIDFES DMVDKSAFVM NLLMSAPESK PAVVEEGGVP VLVEIVEAGT QRQKEISVSI LLQLCEESVV
301: YRTMVAREGA VPPLVALSQG SASRGAKVKA EALIELLRQP RQQQQQQQHF ESNDNER
Arabidopsis Description
ARM repeat superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q8LGC7]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.