Factsheet for Os08t0415600-00

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
plastid 2
cytosol 2
mitochondrion 1
extracellular 1
golgi 1
plasma membrane 1
endoplasmic reticulum 1
vacuole 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus, plastid, secretory
BaCelLo:	nucleus
iPSORT:	plastid
MultiLoc:	cytosol
Plant-mPloc:	nucleus
Predotar:	secretory
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2D01G475600.1	Wheat	cytosol, plasma membrane	65.27	67.92
TraesCS2A01G475600.1	Wheat	cytosol, plasma membrane	65.41	67.87
Zm00001d050308_P001	Maize	mitochondrion, plasma membrane	65.55	67.72
TraesCS2B01G499300.1	Wheat	plasma membrane	64.85	67.49
OQU80426	Sorghum	endoplasmic reticulum, plasma membrane	65.69	65.97
Os09t0378700-00	Rice	plasma membrane, plastid	59.14	59.55
GSMUA_Achr9P14560_001	Banana	cytosol	36.68	44.96
GSMUA_Achr3P06160_001	Banana	plastid	32.91	41.62
VIT_01s0026g00190.t01	Wine grape	cytosol	35.98	37.77
VIT_17s0000g08080.t01	Wine grape	cytosol, mitochondrion	35.29	37.26
PGSC0003DMT400062931	Potato	cytosol	34.45	36.22
KRH69547	Soybean	cytosol, plastid	35.7	35.9
KRH03317	Soybean	cytosol, plastid	33.75	35.8
Solyc03g114160.1.1	Tomato	cytosol	33.89	35.63
CDY55050	Canola	cytosol	34.03	35.06
Bra019924.1-P	Field mustard	mitochondrion	33.61	34.68
CDX93411	Canola	mitochondrion	33.61	34.53
PGSC0003DMT400095861	Potato	cytosol, plasma membrane	26.92	34.46
CDY04344	Canola	cytosol	15.06	33.86
Solyc05g005670.1.1	Tomato	cytosol, mitochondrion	32.22	33.72
KRH54418	Soybean	cytosol, plastid	31.94	33.53
AT1G60190.1	Thale cress	cytosol, plastid	31.8	33.24
PGSC0003DMT400082693	Potato	cytosol	11.16	32.79
CDY24520	Canola	cytosol	30.54	32.49
AT1G10560.1	Thale cress	cytosol	31.52	32.42
Bra031521.1-P	Field mustard	cytosol	30.54	32.35
CDY54132	Canola	cytosol	30.4	32.06
CDY04342	Canola	cytosol	14.78	31.83
PGSC0003DMT400090858	Potato	cytosol, mitochondrion	20.08	31.65
Os12t0570000-01	Rice	cytosol	20.08	27.85
Os05t0476700-01	Rice	plastid	26.08	27.62
Os06t0102700-01	Rice	plasma membrane	22.87	27.15
Os01t0823900-01	Rice	plastid	25.66	27.06
Os02t0234300-01	Rice	cytosol	21.06	25.99
Os02t0732200-01	Rice	cytosol	22.59	25.43
Os06t0726900-00	Rice	cytosol	13.25	25.0
Os03t0275900-01	Rice	cytosol	23.85	23.55
Os08t0481200-01	Rice	cytosol	21.06	23.52
Os07t0587500-01	Rice	cytosol	11.58	22.93
Os03t0435300-00	Rice	cytosol	12.55	22.5
Os02t0488600-01	Rice	cytosol, nucleus	12.97	21.99
Os07t0584900-01	Rice	plastid	13.25	20.34
Os04t0348400-01	Rice	cytosol	12.55	19.61
Os08t0110500-01	Rice	plasma membrane	19.11	16.63
Os01t0884400-01	Rice	plasma membrane	18.83	16.11

Protein Annotations

Gene3D:1.25.10.10	MapMan:19.2.2.1.5.2.1	Gene3D:3.30.40.10	UniProt:A0A0P0XFL3	InterPro:ARM-like	InterPro:ARM-type_fold
InterPro:Armadillo	ProteinID:BAT05432.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0004842	GO:GO:0005488
GO:GO:0005515	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0005737
GO:GO:0006464	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016567	GO:GO:0016740
GO:GO:0019538	InterPro:IPR000225	InterPro:IPR003613	InterPro:IPR011989	InterPro:IPR013083	EnsemblPlantsGene:Os08g0415600
EnsemblPlants:Os08t0415600-00	PFAM:PF00514	PFAM:PF04564	PFscan:PS50176	PFscan:PS51698	PANTHER:PTHR23315
PANTHER:PTHR23315:SF116	SMART:SM00185	SMART:SM00504	SUPFAM:SSF48371	SUPFAM:SSF57850	UniParc:UPI0003939EA2
InterPro:Ubox_domain	InterPro:Znf_RING/FYVE/PHD	SEG:seg	:	:	:

Description

plant U-box-containing protein 5, U-box protein 5Similar to ubiquitin-protein ligase. (Os08t0415600-00)

Coordinates

chr8:+:19875348..19881382

Molecular Weight (calculated)

75855.1 Da

IEP (calculated)

8.613

GRAVY (calculated)

-0.034

Length

717 amino acids

Sequence
(BLAST)

001: MTPPPPPPRR RMLAMPAVCP CEDISPGTLL ASLATLSADV ADGCDVDRLP ALRGGVGVAV RVAGLLREFL EEVRWAAAAE LPGGSVLGMS ELHVALQKMR
101: FLLEDCGRKG ARMWVLMNAE AVASELRVVL GSVATAMDVL PAGVVAASDD AREFAALVSQ QAWRAAVRPD EEDSRAARSV RSMLARFRSG ATPDAEDARL
201: VLGRVGVASW WDCSQEVSFL EAEMLERLEA GGENDNDLVL ISGLLTFLLY CRVVLFDRID YGKADEPAPA PAPRAASYLA RINPEGLQCP ITLELMTDPV
301: TLATGQTYDR ASIKRWVKSG CRTCPVTGEK LRSADVVPNV AVRGIVEQLL LSSGVSLHEP SSKHRCAVDK TASPFGAAAA GGARLAVAFL VSKLCRGTPE
401: EQKKATYECR KLSKRNVFHR ACLVDAGAVP WLLHLLSSPD ASVQDNAVAG LLNLSKHPAG RRALVEAGGL GLIVDAVSVA AKVEAQQNAA AILFYLSSDA
501: GYCDEISRIP EAIPTLVRLV REGAYRGRKN ALVSLYGVLQ RGAGGHGRAV SAGAVAALAS LLPGDRDDLA NDAVALLARL AEQPAGAAAV LSSSALVTRL
601: VDFLGASASR SAKDHCAALL ASLCRHGGDA HGLRAEQRQR GAAPGCGQSD DGRRRASGRQ EQRAAGRADS GRARRAEEGA AMAEVAEGGA WQRWASSAGL
701: LSPPRCRRKR GAWRRRW

Best Arabidopsis Sequence Match ( AT1G60190.1 )
(BLAST)

001: MIHTPTGSSR RILTFPAVNP CESISLTTLV DSLLQLAGEI LSFKPKHFST NKRSVKETLR HVQTLVIFFE ELRIQIRVGS IPAGRSVILS LSELHVIFQK
101: LKFLLDDCTR DGAKLYMLMN SGQVSAHFRD LTRSISTSLD TFPVRSVDLP GEVNELIYLV MRQTRKSEAR PDRDDKRAID SVYWFFNLFE NRINPNSDEI
201: LRVLDHIGVR KWRDCVKEID FLREEISVGK KSNIEIELLS NLMGFICYCR CVILRGIDVD DEEKDKEEDD LMMVRSLNVD DLRCPISLEI MSDPVVLESG
301: HTYDRSSITK WFASGNITCP KTGKTLVSTV LVDNFSVKQV IQSYSKQNGV VMGQKGKKKV DVAESLAAEE AGKLTAEFLA GELIKGDEEE MVKALVEIRI
401: LTKTSTFYRS CLVEAGVVES LMKILRSDDP RIQENAMAGI MNLSKDIAGK TRIVGEDGGG LRLIVEVLND GARRESRQYA AAALFYLSSL GDYSRLIGEI
501: SDAIPGLVRI VKSCDYGDSA KRNALIAIRS LLMNQPDNHW RILAAGIVPV LLDLVKSEEI SDGVTADSMA ILAKMAEYPD GMISVLRRGG LKLAVKILGS
601: SEVSPATKQH CVALLLNLCH NGGSDVVGSL AKNPSIMGSL YTASSNGELG GGKKASALIK MIHEFQERKT GPGEPVLERE RFVHAW

Arabidopsis Description

PUB19U-box domain-containing protein 19 [Source:UniProtKB/Swiss-Prot;Acc:O80742]
SUBAcon: [cytosol,plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.