Factsheet for Os03t0275900-01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 2
mitochondrion 1
plasma membrane 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus, plasma membrane
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	plasma membrane
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS4A01G097700.1	Wheat	cytosol	80.03	81.26
Zm00001d028623_P001	Maize	cytosol	79.34	79.34
OQU92820	Sorghum	cytosol	78.79	76.37
HORVU4Hr1G059610.2	Barley	cytosol	80.03	75.26
TraesCS4D01G207700.2	Wheat	plastid	80.3	75.03
TraesCS4B01G206900.1	Wheat	plastid	78.79	74.67
GSMUA_Achr10P...	Banana	cytosol	54.96	63.74
GSMUA_Achr5P07140_001	Banana	cytosol	53.58	61.94
KRH29807	Soybean	cytosol	55.23	60.67
VIT_06s0004g04530.t01	Wine grape	cytosol	56.89	60.56
KRH24807	Soybean	cytosol	55.1	60.42
Os12t0570000-01	Rice	cytosol	42.7	59.96
Solyc11g066040.1.1	Tomato	cytosol	54.27	59.43
PGSC0003DMT400001049	Potato	cytosol	53.72	58.73
PGSC0003DMT400078166	Potato	cytosol	52.89	58.09
GSMUA_Achr5P28670_001	Banana	cytosol	45.32	57.72
Solyc06g076040.2.1	Tomato	cytosol	52.48	57.64
AT2G28830.1	Thale cress	endoplasmic reticulum	45.87	57.22
CDY31736	Canola	cytosol	48.62	54.98
CDX77213	Canola	cytosol	48.62	54.9
Bra035665.1-P	Field mustard	cytosol	49.17	54.75
AT3G46510.1	Thale cress	cytosol	49.59	54.55
Bra018212.1-P	Field mustard	cytosol	48.9	54.53
CDX86080	Canola	cytosol	48.9	54.12
CDX99112	Canola	cytosol	48.76	54.05
Bra033820.1-P	Field mustard	cytosol	48.62	53.65
CDX68379	Canola	cytosol	48.62	53.65
CDX68380	Canola	cytosol	38.43	52.44
Os06t0102700-01	Rice	plasma membrane	41.74	50.17
GSMUA_Achr10P...	Banana	cytosol	58.13	48.84
KRG99865	Soybean	cytosol	38.43	45.22
Os08t0481200-01	Rice	cytosol	35.26	39.88
Os02t0732200-01	Rice	cytosol	34.85	39.72
Os06t0726900-00	Rice	cytosol	19.56	37.37
Os02t0488600-01	Rice	cytosol, nucleus	21.35	36.64
Os07t0587500-01	Rice	cytosol	17.36	34.81
Os04t0348400-01	Rice	cytosol	20.8	32.9
Os02t0234300-01	Rice	cytosol	24.1	30.12
Os07t0584900-01	Rice	plastid	19.01	29.55
Os01t0823900-01	Rice	plastid	27.0	28.82
Os05t0476700-01	Rice	plastid	26.03	27.92
Os03t0435300-00	Rice	cytosol	15.15	27.5
Os08t0110500-01	Rice	plasma membrane	29.61	26.09
Os01t0884400-01	Rice	plasma membrane	29.06	25.18
Os09t0378700-00	Rice	plasma membrane, plastid	23.97	24.44
Os08t0415600-00	Rice	cytosol	23.55	23.85

Protein Annotations

Gene3D:1.25.10.10	MapMan:19.2.2.1.5.2.1	Gene3D:3.30.40.10	EntrezGene:4332412	ProteinID:ABF95255.1	EMBL:AK121978
InterPro:ARM-like	InterPro:ARM-type_fold	InterPro:Armadillo	ProteinID:BAF11625.1	ProteinID:BAS83511.1	ProteinID:BAS83513.1
ncoils:Coil	ProteinID:EEE58792.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0004842	GO:GO:0005488
GO:GO:0005515	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0005737
GO:GO:0006464	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016567	GO:GO:0016740
GO:GO:0019538	InterPro:IPR000225	InterPro:IPR003613	InterPro:IPR011989	InterPro:IPR013083	EnsemblPlantsGene:Os03g0275900
EnsemblPlants:Os03t0275900-01	PFAM:PF00514	PFAM:PF04564	PFscan:PS50176	PFscan:PS51698	PANTHER:PTHR23315
PANTHER:PTHR23315:SF142	UniProt:Q10NB2	SMART:SM00185	SMART:SM00504	SUPFAM:SSF48371	SUPFAM:SSF57850
UniParc:UPI0000DB45A3	InterPro:Ubox_domain	RefSeq:XP_015632795.1	InterPro:Znf_RING/FYVE/PHD	SEG:seg	:

Description

plant U-box-containing protein 10, U-box protein 10Similar to Spotted leaf protein 11 (Spotted leaf11) (Cell death-related protein SPL11). (Os03t0275900-01);Hypothetical conserved gene. (Os03t0275900-02);Similar to Protein spotted leaf 11. (Os03t0275900-03)

Coordinates

chr3:+:9329407..9335088

Molecular Weight (calculated)

79098.2 Da

IEP (calculated)

4.811

GRAVY (calculated)

-0.315

Length

726 amino acids

Sequence
(BLAST)

001: MDEEAKPNPN ADAAPAAAEA AASSPPPLSS SESAEGKDKE EEKEEEEEEE AGDLVEKLVE LVEEIAAISD FRNAYRRQFC NLSRRIRLLA PMLEEAKEGP
101: RPLPDVSYSA LRRLREALAD SRELLRLGVS GSKISLVLER EKIMKSFQDI TARLEQALGL ISFDELDISD EVREQVELVH AQFKRAKERS DPSDDDLFND
201: LVSVYNSSTS ANVDPDILQR LSDKLQLATI SDLNQESLIL HEMASGGDPG AVVEKMSMLL KRIKDFVQSR DPEMGTPVNT TELSGKDNMA SLIVPDDFRC
301: PISLDLMKDP VIVATGQTYE RGCIERWLEA GHDTCPKTQQ KLPNKSLTPN YVLRSLIAQW CEANGMEPPK RAAQHHNAPA SCTAAEHSNV VELLQKLLSQ
401: NLEDQREAAG MLRQLAKRSP ENRACIGDAG AIPILVSLLS ITDVSTQEHV VTALLNLSIY EENKARIITS GAVPGVVHVL KRGSMEAREN SAATLFSLSL
501: VDENKITIGA SGAIPALVLL LSNGSQRGKR DAATALFNLC IYQGNKGKAV RAGLIPVLLG LVTETESGMM DEALAILAIL SSHPEGKTAI SSANAIPMLV
601: GVIRNGSARN KENAAAVLVH LCNGEQQQQH LAEAQEQGIV TLLEELAKSG TDRGKRKAIQ LLERMNRFLM QQSQAQAQAE AMAQAHAHAQ SQAQVQALNE
701: AQSQVEMQVE QLLLPTTSHL SDRRDG

Best Arabidopsis Sequence Match ( AT3G46510.1 )
(BLAST)

001: MEEEKASAAQ SLIDVVNEIA AISDYRITVK KLCYNLARRL KLLVPMFEEI RESNEPISED TLKTLMNLKE AMCSAKDYLK FCSQGSKIYL VMEREQVTSK
101: LMEVSVKLEQ SLSQIPYEEL DISDEVREQV ELVLSQFRRA KGRVDVSDDE LYEDLQSLCN KSSDVDAYQP VLERVAKKLH LMEIPDLAQE SVALHEMVAS
201: SGGDVGENIE EMAMVLKMIK DFVQTEDDNG EEQKVGVNSR SNGQTSTAAS QKIPVIPDDF RCPISLEMMR DPVIVSSGQT YERTCIEKWI EGGHSTCPKT
301: QQALTSTTLT PNYVLRSLIA QWCEANDIEP PKPPSSLRPR KVSSFSSPAE ANKIEDLMWR LAYGNPEDQR SAAGEIRLLA KRNADNRVAI AEAGAIPLLV
401: GLLSTPDSRI QEHSVTALLN LSICENNKGA IVSAGAIPGI VQVLKKGSME ARENAAATLF SLSVIDENKV TIGALGAIPP LVVLLNEGTQ RGKKDAATAL
501: FNLCIYQGNK GKAIRAGVIP TLTRLLTEPG SGMVDEALAI LAILSSHPEG KAIIGSSDAV PSLVEFIRTG SPRNRENAAA VLVHLCSGDP QHLVEAQKLG
601: LMGPLIDLAG NGTDRGKRKA AQLLERISRL AEQQKETAVS QPEEEAEPTH PESTTEAADT

Arabidopsis Description

PUB13U-box domain-containing protein 13 [Source:UniProtKB/Swiss-Prot;Acc:Q9SNC6]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.