CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 2
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus, plastid
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d028623_P001	Maize	cytosol	90.65	93.53
TraesCS4A01G097700.1	Wheat	cytosol	75.43	79.02
Os03t0275900-01	Rice	cytosol	76.37	78.79
HORVU4Hr1G059610.2	Barley	cytosol	75.43	73.19
TraesCS4B01G206900.1	Wheat	plastid	74.77	73.11
TraesCS4D01G207700.2	Wheat	plastid	75.43	72.72
GSMUA_Achr10P...	Banana	cytosol	53.27	63.74
VIT_06s0004g04530.t01	Wine grape	cytosol	56.21	61.73
KRH29807	Soybean	cytosol	53.94	61.12
KRH24807	Soybean	cytosol	53.67	60.73
Solyc11g066040.1.1	Tomato	cytosol	53.67	60.63
GSMUA_Achr5P07140_001	Banana	cytosol	50.47	60.19
PGSC0003DMT400001049	Potato	cytosol	53.27	60.09
OQU79384	Sorghum	cytosol	52.87	59.46
GSMUA_Achr5P28670_001	Banana	cytosol	44.99	59.12
PGSC0003DMT400078166	Potato	cytosol	51.8	58.7
Solyc06g076040.2.1	Tomato	cytosol	51.27	58.09
AT2G28830.1	Thale cress	endoplasmic reticulum	44.73	57.56
AT3G46510.1	Thale cress	cytosol	48.87	55.45
Bra018212.1-P	Field mustard	cytosol	47.93	55.15
CDX77213	Canola	cytosol	47.13	54.9
CDY31736	Canola	cytosol	47.0	54.83
CDX99112	Canola	cytosol	47.93	54.81
Bra035665.1-P	Field mustard	cytosol	47.66	54.75
CDX86080	Canola	cytosol	47.8	54.57
CDX68379	Canola	cytosol	47.93	54.56
Bra033820.1-P	Field mustard	cytosol	47.8	54.41
CDX68380	Canola	cytosol	38.18	53.76
EER87680	Sorghum	cytosol	41.92	52.25
GSMUA_Achr10P...	Banana	cytosol	55.81	48.38
KRG99865	Soybean	cytosol	37.78	45.87
EES07310	Sorghum	cytosol	34.05	39.97
KXG20946	Sorghum	cytosol	33.11	38.57
EES15482	Sorghum	cytosol	32.98	38.41
EES06804	Sorghum	cytosol	21.9	35.34
EER97464	Sorghum	cytosol	16.82	34.81
EER97453	Sorghum	plastid	18.02	28.85
OQU78182	Sorghum	plastid	25.63	28.28
EES04812	Sorghum	plastid	25.77	26.47
EES01872	Sorghum	cytosol	28.3	26.34
KXG33626	Sorghum	plastid	24.57	26.21
KXG35540	Sorghum	plasma membrane	23.77	24.86
OQU80426	Sorghum	endoplasmic reticulum, plasma membrane	23.63	24.79
EES14396	Sorghum	cytosol	29.24	21.75

Protein Annotations

Gene3D:1.20.930.20	Gene3D:1.25.10.10	MapMan:19.2.2.1.5.2.1	Gene3D:3.30.40.10	UniProt:A0A1Z5SA52	InterPro:ARM-like
InterPro:ARM-type_fold	InterPro:Adaptor_Cbl_N_dom_sf	InterPro:Armadillo	ncoils:Coil	GO:GO:0003674	GO:GO:0003824
GO:GO:0004842	GO:GO:0004871	GO:GO:0005488	GO:GO:0005515	GO:GO:0006464	GO:GO:0007154
GO:GO:0007165	GO:GO:0007166	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016567
GO:GO:0016740	GO:GO:0019538	InterPro:IPR000225	InterPro:IPR003613	InterPro:IPR011989	InterPro:IPR013083
InterPro:IPR036537	EnsemblPlants:OQU92820	ProteinID:OQU92820	ProteinID:OQU92820.1	PFAM:PF00514	PFAM:PF04564
PFscan:PS50176	PFscan:PS51698	PANTHER:PTHR23315	PANTHER:PTHR23315:SF142	SMART:SM00185	SMART:SM00504
EnsemblPlantsGene:SORBI_3001G420500	SUPFAM:SSF48371	SUPFAM:SSF57850	UniParc:UPI000B42572D	InterPro:Ubox_domain	InterPro:Znf_RING/FYVE/PHD
SEG:seg	:	:	:	:	:

Description

hypothetical protein

Coordinates

chr1:-:70150749..70155949

Molecular Weight (calculated)

81193.6 Da

IEP (calculated)

4.987

GRAVY (calculated)

-0.284

Length

749 amino acids

Sequence
(BLAST)

001: MDDEAAKSVP TSDMNTDAAA EAEAAAAPLR PSSSEAAERE AKVEGADEEG QVVERLVELV SEIATISDFR NSYRRQFCNL SRRIRLLVPM LEEAKEAPAP
101: LPAASEAALR RLRDALHAAR ELLRLGSSGS KIFLVLDREK IMKTFQDVTA RLEQALAGIS FDELDISDEV REQVELVHTQ FKRAKERSDS SDDDLFNELM
201: SLYNSSSSAS VDPDILRRLS EKLQLVTIYD LNHESLTLHE MARGGDPGAV VEKMSMLLKR IKDFVQTEDP EMGARASTAN IFPKDNSARP VIPDDFRCPI
301: SLDLMSDPVI VATGQTYERG YIEMWLEAGH DTCPKTQQKL ANKSLTPNYV LRSLITQWCE ANGIEPPKRP AQLKDAPLPC SAAEHSNVLE LLQKLSSQNL
401: EDQRGAAGML RQLAKRSAEN RACIGDAGAI PILVSMLSTT DVSTQEHVVT ALLNLSIYEE NKARIISSGA VPGIVHVLKR GSMEARENSA ATLFSLSIVD
501: ENKVTIGCSG AIPALVQLLS DGSQRGKKDA ATALFNLCIY QGNKRKAVRA GLVPILLELL MESESGMVDE ALAILAILSG HPEGKAAIGA ASAIPVLVGV
601: IRTGSPRSKE NAAAVMVHLC NGEGEQQQQH LAEAQEQGIV SLLEELAESG TDRGKRKAVH LLERMNRFLK RQSQAQAEAE AMAQAHAQAQ AQAQAQAQAQ
701: AQAQAQAQAQ AQAQAQAQAQ PQILVQAEAH ADMQAERSLL PTSPDISDR

Best Arabidopsis Sequence Match ( AT3G46510.1 )
(BLAST)

001: MEEEKASAAQ SLIDVVNEIA AISDYRITVK KLCYNLARRL KLLVPMFEEI RESNEPISED TLKTLMNLKE AMCSAKDYLK FCSQGSKIYL VMEREQVTSK
101: LMEVSVKLEQ SLSQIPYEEL DISDEVREQV ELVLSQFRRA KGRVDVSDDE LYEDLQSLCN KSSDVDAYQP VLERVAKKLH LMEIPDLAQE SVALHEMVAS
201: SGGDVGENIE EMAMVLKMIK DFVQTEDDNG EEQKVGVNSR SNGQTSTAAS QKIPVIPDDF RCPISLEMMR DPVIVSSGQT YERTCIEKWI EGGHSTCPKT
301: QQALTSTTLT PNYVLRSLIA QWCEANDIEP PKPPSSLRPR KVSSFSSPAE ANKIEDLMWR LAYGNPEDQR SAAGEIRLLA KRNADNRVAI AEAGAIPLLV
401: GLLSTPDSRI QEHSVTALLN LSICENNKGA IVSAGAIPGI VQVLKKGSME ARENAAATLF SLSVIDENKV TIGALGAIPP LVVLLNEGTQ RGKKDAATAL
501: FNLCIYQGNK GKAIRAGVIP TLTRLLTEPG SGMVDEALAI LAILSSHPEG KAIIGSSDAV PSLVEFIRTG SPRNRENAAA VLVHLCSGDP QHLVEAQKLG
601: LMGPLIDLAG NGTDRGKRKA AQLLERISRL AEQQKETAVS QPEEEAEPTH PESTTEAADT

Arabidopsis Description

PUB13U-box domain-containing protein 13 [Source:UniProtKB/Swiss-Prot;Acc:Q9SNC6]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.