CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 2
mitochondrion 2
endoplasmic reticulum 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, endoplasmic reticulum, mitochondrion
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	endoplasmic reticulum
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os12t0570000-01	Rice	cytosol	38.41	45.84
KRH29807	Soybean	cytosol	48.95	45.69
KRH04403	Soybean	mitochondrion	26.74	45.58
KRH24807	Soybean	cytosol	48.78	45.47
Zm00001d030732_P001	Maize	cytosol	46.52	43.16
KRH17146	Soybean	cytosol	16.37	42.44
KRH34817	Soybean	cytosol	43.44	42.41
TraesCS5A01G078400.1	Wheat	cytosol	47.0	42.4
HORVU5Hr1G021270.1	Barley	cytosol	46.68	42.23
KRG91959	Soybean	cytosol	42.95	42.0
HORVU5Hr1G021280.1	Barley	cytosol	46.68	41.86
TraesCS5D01G093700.1	Wheat	cytosol	46.35	41.81
TraesCS5B01G087500.1	Wheat	cytosol	46.19	41.79
OQU79384	Sorghum	cytosol	45.06	41.74
Zm00001d041548_P002	Maize	cytosol	45.22	41.52
GSMUA_Achr10P...	Banana	cytosol	41.49	40.89
TraesCS4A01G097700.1	Wheat	cytosol	46.19	39.86
Zm00001d028623_P001	Maize	cytosol	45.22	38.43
Os03t0275900-01	Rice	cytosol	45.22	38.43
GSMUA_Achr5P28670_001	Banana	cytosol	35.49	38.42
GSMUA_Achr6P34170_001	Banana	cytosol	40.68	37.8
OQU92820	Sorghum	cytosol	45.87	37.78
TraesCS4B01G206900.1	Wheat	plastid	46.35	37.34
KRG89279	Soybean	cytosol	39.22	37.17
HORVU4Hr1G059610.2	Barley	cytosol	46.35	37.05
KRH50347	Soybean	nucleus	39.06	36.85
TraesCS4D01G207700.2	Wheat	plastid	46.19	36.68
GSMUA_Achr5P07140_001	Banana	cytosol	35.98	35.35
KRH00831	Soybean	cytosol	35.17	34.17
KRH40395	Soybean	cytosol	35.01	34.02
KRH15451	Soybean	cytosol	14.59	33.21
KRH52088	Soybean	cytosol	17.34	32.72
KRH33490	Soybean	cytosol	26.58	31.24
KRH68828	Soybean	cytosol	21.07	30.23
KRG97080	Soybean	cytosol, nucleus	21.23	29.77
KRH73275	Soybean	cytosol	24.31	29.47
GSMUA_Achr10P...	Banana	cytosol	41.0	29.28
KRG92593	Soybean	cytosol	20.26	28.22
KRH05594	Soybean	cytosol	16.05	28.12
KRG99581	Soybean	cytosol	20.75	27.77
KRH46608	Soybean	cytosol	20.42	27.33
KRH42917	Soybean	mitochondrion	30.96	26.71
KRH59027	Soybean	mitochondrion	30.79	26.57
KRH11061	Soybean	mitochondrion, plastid	30.79	26.54
KRH21208	Soybean	mitochondrion	30.47	26.26
KRH51173	Soybean	cytosol	17.83	25.7
KRH01984	Soybean	cytosol	17.67	25.65
KRH36562	Soybean	plastid	18.48	24.89
KRH65448	Soybean	plastid	19.61	24.8
KRH03317	Soybean	cytosol, plastid	26.74	24.41
KRH11541	Soybean	plastid	17.99	24.29
KRH76105	Soybean	cytosol, plastid	27.07	23.79
KRH54418	Soybean	cytosol, plastid	25.77	23.28
KRH72794	Soybean	plasma membrane	29.17	22.14
KRG95672	Soybean	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	28.69	21.74
KRG98177	Soybean	cytosol	29.5	21.64
KRH69547	Soybean	cytosol, plastid	24.96	21.6
KRH30135	Soybean	cytosol	29.17	21.48
KRH67390	Soybean	cytosol, plastid	28.69	20.68
KRH32190	Soybean	cytosol	21.07	19.61

Protein Annotations

Gene3D:1.25.10.10	MapMan:19.2.2.1.5.2.1	Gene3D:3.30.40.10	UniProt:A0A0R0F179	EMBL:ACUP02011335	InterPro:ARM-like
InterPro:ARM-type_fold	InterPro:Armadillo	EnsemblPlantsGene:GLYMA_18G176400	GO:GO:0003674	GO:GO:0003824	GO:GO:0004842
GO:GO:0005488	GO:GO:0005515	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634
GO:GO:0005737	GO:GO:0006464	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016567
GO:GO:0016740	GO:GO:0019538	InterPro:IPR000225	InterPro:IPR003613	InterPro:IPR011989	InterPro:IPR013083
EnsemblPlants:KRG99865	ProteinID:KRG99865	ProteinID:KRG99865.1	PFAM:PF00514	PFAM:PF04564	PFscan:PS50176
PFscan:PS51698	PANTHER:PTHR23315	PANTHER:PTHR23315:SF225	SMART:SM00185	SMART:SM00504	SUPFAM:SSF48371
SUPFAM:SSF57850	UniParc:UPI0006ED90B4	InterPro:Ubox_domain	InterPro:Znf_RING/FYVE/PHD	:	:

Description

hypothetical protein

Coordinates

chr18:-:42089009..42095463

Molecular Weight (calculated)

67788.7 Da

IEP (calculated)

4.746

GRAVY (calculated)

0.059

Length

617 amino acids

Sequence
(BLAST)

001: MAEPEAESFR MLRNLTRIVI QISTLSSAAS FVPILKPQCC DLARRIRFLA ALFQELHDDI VSSRAVHFLA LEDALFKAME LLRFATRASQ VFTILDREQV
101: MFGFTDVAVR FEHALSMISF GELDVSEEIK EQVALVITQF RRAKAQFDPP GFQLYEHLLF VYNQSYDVNT ETAELRVICE KLQFLNVDDI KQESLALQKM
201: VVDKGGYSQK NIHDMSLVVL KKIQDFLVME SGNNIVSPSE DFSHHTDEPY LKLCPQSLVI PDEFRCPISL ELMKDPVIIC TGQTYDRSCI KKWLEAGHRT
301: CPMTQQILST SILIPNHALY GLISSWCEAN GVEPPKRSGN LWLCKTTSDG SSEFIDLDIL VSKLSSNDIE ELRCAQNSQN RMLIAEAGAI PHLVDLLYAP
401: DAGTQEHVVT ALLNLSINVD NKERIMASEA VPGILHVLEN GSMEAQENAA ATFFSLSGVD ENRVAIGASG AIPALVTLFC EGSQRGKVDA AKALFNLCLS
501: QGNKGRAIRA GIVPKLIEML TEPDGDMRDE AMTIMAVVAN HSDGQAAIGS MNVVSTLVEL VSNRSPGNKE NATSVLLLLC NGDPFYLSIV SSLGLVNPLL
601: DLAGNGSEGP SGKLPSF

Best Arabidopsis Sequence Match ( AT3G46510.1 )
(BLAST)

001: MEEEKASAAQ SLIDVVNEIA AISDYRITVK KLCYNLARRL KLLVPMFEEI RESNEPISED TLKTLMNLKE AMCSAKDYLK FCSQGSKIYL VMEREQVTSK
101: LMEVSVKLEQ SLSQIPYEEL DISDEVREQV ELVLSQFRRA KGRVDVSDDE LYEDLQSLCN KSSDVDAYQP VLERVAKKLH LMEIPDLAQE SVALHEMVAS
201: SGGDVGENIE EMAMVLKMIK DFVQTEDDNG EEQKVGVNSR SNGQTSTAAS QKIPVIPDDF RCPISLEMMR DPVIVSSGQT YERTCIEKWI EGGHSTCPKT
301: QQALTSTTLT PNYVLRSLIA QWCEANDIEP PKPPSSLRPR KVSSFSSPAE ANKIEDLMWR LAYGNPEDQR SAAGEIRLLA KRNADNRVAI AEAGAIPLLV
401: GLLSTPDSRI QEHSVTALLN LSICENNKGA IVSAGAIPGI VQVLKKGSME ARENAAATLF SLSVIDENKV TIGALGAIPP LVVLLNEGTQ RGKKDAATAL
501: FNLCIYQGNK GKAIRAGVIP TLTRLLTEPG SGMVDEALAI LAILSSHPEG KAIIGSSDAV PSLVEFIRTG SPRNRENAAA VLVHLCSGDP QHLVEAQKLG
601: LMGPLIDLAG NGTDRGKRKA AQLLERISRL AEQQKETAVS QPEEEAEPTH PESTTEAADT

Arabidopsis Description

PUB13U-box domain-containing protein 13 [Source:UniProtKB/Swiss-Prot;Acc:Q9SNC6]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.