CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 6
mitochondrion 1
cytosol 3

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH11541	Soybean	plastid	96.07	96.28
VIT_00s2269g00010.t01	Wine grape	plastid	77.95	78.98
KRH01984	Soybean	cytosol	72.93	78.59
KRH51173	Soybean	cytosol	73.36	78.5
PGSC0003DMT400034564	Potato	nucleus, plastid	74.02	74.02
AT4G16490.1	Thale cress	plastid	75.98	73.73
Solyc11g012440.1.1	Tomato	cytosol, plastid	73.58	73.42
Bra038470.1-P	Field mustard	plastid	74.67	73.08
Solyc04g014810.2.1	Tomato	plastid	71.4	72.51
PGSC0003DMT400060674	Potato	plastid	71.18	72.28
Bra012713.1-P	Field mustard	cytosol	71.62	72.09
CDX90518	Canola	plastid	71.4	71.87
CDY09688	Canola	cytosol	70.96	71.59
GSMUA_Achr4P06990_001	Banana	plastid	52.18	59.31
HORVU7Hr1G038870.1	Barley	plastid	37.12	59.23
GSMUA_Achr4P11070_001	Banana	cytosol	53.06	57.58
GSMUA_Achr3P29830_001	Banana	cytosol	51.09	56.25
GSMUA_Achr1P22790_001	Banana	mitochondrion	53.28	53.86
Zm00001d021951_P001	Maize	plastid	54.59	53.76
EER97453	Sorghum	plastid	54.8	53.63
HORVU2Hr1G036080.15	Barley	plastid	53.28	53.28
Os07t0584900-01	Rice	plastid	54.15	53.1
Zm00001d006705_P001	Maize	plastid	53.71	53.02
TraesCS2A01G190800.1	Wheat	cytosol	50.22	52.75
TraesCS2D01G197200.1	Wheat	plastid	52.84	52.72
TraesCS2B01G216300.1	Wheat	plastid	52.62	52.62
KRH15451	Soybean	cytosol	30.57	51.66
KRH17146	Soybean	cytosol	25.98	50.0
KRH05594	Soybean	cytosol	36.9	48.01
KRH52088	Soybean	cytosol	33.62	47.09
KRH04403	Soybean	mitochondrion	26.86	33.98
KRH68828	Soybean	cytosol	20.96	22.33
KRG92593	Soybean	cytosol	21.4	22.12
KRG97080	Soybean	cytosol, nucleus	21.18	22.05
KRG91959	Soybean	cytosol	29.69	21.55
KRH34817	Soybean	cytosol	29.69	21.52
KRH24807	Soybean	cytosol	31.0	21.45
KRH29807	Soybean	cytosol	30.79	21.33
KRH33490	Soybean	cytosol	23.58	20.57
KRG89279	Soybean	cytosol	29.04	20.43
KRH72794	Soybean	plasma membrane	36.24	20.42
KRH30135	Soybean	cytosol	37.34	20.41
KRG99581	Soybean	cytosol	20.52	20.39
KRH50347	Soybean	nucleus	28.82	20.18
KRH46608	Soybean	cytosol	20.31	20.17
KRG98177	Soybean	cytosol	36.24	19.74
KRH00831	Soybean	cytosol	27.29	19.68
KRH40395	Soybean	cytosol	27.07	19.53
KRG95672	Soybean	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	32.97	18.55
KRG99865	Soybean	cytosol	24.89	18.48
KRH67390	Soybean	cytosol, plastid	32.53	17.41
KRH11061	Soybean	mitochondrion, plastid	25.33	16.2
KRH73275	Soybean	cytosol	17.9	16.11
KRH42917	Soybean	mitochondrion	25.11	16.08
KRH21208	Soybean	mitochondrion	25.11	16.06
KRH59027	Soybean	mitochondrion	24.67	15.8
KRH76105	Soybean	cytosol, plastid	20.96	13.68
KRH69547	Soybean	cytosol, plastid	21.18	13.6
KRH03317	Soybean	cytosol, plastid	19.87	13.46
KRH54418	Soybean	cytosol, plastid	19.65	13.18
KRH32190	Soybean	cytosol	17.9	12.37
KRH65448	Soybean	plastid	11.35	10.66

Protein Annotations

Gene3D:1.25.10.10	EntrezGene:100806768	MapMan:35.1	UniProt:A0A0R0I675	EMBL:ACUP02005381	InterPro:ARM-like
InterPro:ARM-type_fold	InterPro:Armadillo	EnsemblPlantsGene:GLYMA_09G011300	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515
InterPro:IPR000225	InterPro:IPR011989	EnsemblPlants:KRH36562	ProteinID:KRH36562	ProteinID:KRH36562.1	PFAM:PF00514
PFscan:PS50176	PANTHER:PTHR23315	PANTHER:PTHR23315:SF129	SMART:SM00185	SUPFAM:SSF48371	UniParc:UPI0001B63EF5
SEG:seg	:	:	:	:	:

Description

hypothetical protein

Coordinates

chr9:+:875791..878591

Molecular Weight (calculated)

49071.6 Da

IEP (calculated)

6.103

GRAVY (calculated)

-0.138

Length

458 amino acids

Sequence
(BLAST)

001: MVSLEESRSN SSRFPLARSY QYHSSVSSKT QRHIGRSMRT IRSSFFQDDN SSSCCSFTEK STCLSENLTD SVVDLRLGEL ALRNSKSVKS SPAEEDLLDL
101: SQAFSDFSAC SSDISGELQR LATLPSPKKS DVSGDNEAPE LEIEPCMGFL QRENFSTEII ESISPEDLQP TVKMCIDGLQ SQSVAVKRSA AAKLRLLAKN
201: RADNRVLIAE SGAVPVLVPL LRCSDPWTQE HAVTALLNLS LHEDNKMLIT NAGAVKSLIY VLKTGTETSK QNAACALLSL ALVEENKGSI GASGAIPPLV
301: SLLLNGSSRG KKDALTTLYK LCSVRQNKER AVSAGAVKPL VELVAEQGNG MAEKAMVVLN SLAGIQEGKD AIVEEGGIAA LVEAIEDGSV KGKEFAVLTL
401: LQLCVDSVIN RGFLVREGGI PPLVALSQTG SARAKHKAET LLRYLREPRQ EAASTSSS

Best Arabidopsis Sequence Match ( AT4G16490.1 )
(BLAST)

001: MVSVEEPLSH SNSTRFPLTT DFYGSSSPSA ARLHRQAGRS MRTVRSNFYQ SGDQSCSFVG SIGDKSEYAS EFLSDSVIDM RLGELALKNS NSLNSNASSM
101: KEEAFLDISQ AFSDFSACSS DISGELQRLA CLPSPEADRN ESGGDNEAEH DPELEREPCL GFLQRENFST EIIECISPED LQPTVKLCID GLRSSSVAIK
201: RSAAAKLRLL AKNRADNRVL IGESGAIQAL IPLLRCNDPW TQEHAVTALL NLSLHDQNKA VIAAGGAIKS LVWVLKTGTE TSKQNAACAL LSLALLEENK
301: GSIGACGAIP PLVSLLLNGS CRGKKDALTT LYKLCTLQQN KERAVTAGAV KPLVDLVAEE GTGMAEKAMV VLSSLAAIDD GKEAIVEEGG IAALVEAIED
401: GSVKGKEFAI LTLLQLCSDS VRNRGLLVRE GAIPPLVGLS QSGSVSVRAK RKAERLLGYL REPRKEASSS SP

Arabidopsis Description

ARM repeat superfamily protein [Source:UniProtKB/TrEMBL;Acc:F4JMH0]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.