CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
extracellular 2
golgi 2
plasma membrane 2
endoplasmic reticulum 2
vacuole 2
cytosol 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, secretory
BaCelLo:	nucleus
iPSORT:	secretory
MultiLoc:	cytosol
PProwler:	secretory
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3B01G443200.1	Wheat	cytosol, endoplasmic reticulum	70.17	65.75
GSMUA_Achr9P12570_001	Banana	cytosol	69.33	55.0
KRH15451	Soybean	cytosol	49.16	43.17
TraesCS3B01G422200.1	Wheat	cytosol	72.27	38.91
HORVU3Hr1G081380.1	Barley	cytosol	72.27	38.91
TraesCS3A01G390200.1	Wheat	cytosol	69.75	37.81
TraesCS3D01G382500.1	Wheat	cytosol	70.17	37.78
KRH52088	Soybean	cytosol	49.16	35.78
KRH05594	Soybean	cytosol	50.0	33.81
KRH04403	Soybean	mitochondrion	49.58	32.6
GSMUA_Achr4P01530_001	Banana	plasma membrane	77.73	30.28
PGSC0003DMT400027406	Potato	cytosol	31.93	28.46
KRH01984	Soybean	cytosol	49.16	27.53
KRH72794	Soybean	plasma membrane	93.28	27.31
KRH51173	Soybean	cytosol	48.32	26.87
TraesCS3A01G410000.1	Wheat	cytosol	70.17	26.34
KRH36562	Soybean	plastid	50.0	25.98
KRH11541	Soybean	plastid	49.58	25.82
TraesCS3B01G443500.1	Wheat	cytosol	55.88	25.14
CDX76873	Canola	cytosol, plastid	76.05	24.23
TraesCS3A01G410100.1	Wheat	cytosol	53.78	24.2
CDY18649	Canola	cytosol, plastid	69.33	23.17
KRH30135	Soybean	cytosol	81.09	23.03
KRG98177	Soybean	cytosol	81.09	22.95
CDX81323	Canola	cytosol, plastid	69.33	22.82
Solyc01g014230.2.1	Tomato	cytosol	77.73	22.81
Bra037117.1-P	Field mustard	cytosol, plastid	69.33	22.48
AT5G67340.1	Thale cress	cytosol	66.39	22.35
Os08t0110500-01	Rice	plasma membrane	77.31	22.33
Solyc12g100000.1.1	Tomato	cytosol, plastid	76.47	22.22
AT2G23140.1	Thale cress	cytosol	77.31	22.2
PGSC0003DMT400046295	Potato	cytosol	76.47	22.17
TraesCS3D01G527900.1	Wheat	cytosol	77.31	22.14
TraesCS3B01G591000.1	Wheat	cytosol	76.89	22.02
TraesCS3A01G521300.1	Wheat	cytosol	76.89	22.02
VIT_07s0129g00590.t01	Wine grape	cytosol	78.15	21.93
HORVU3Hr1G113910.3	Barley	cytosol	76.47	21.72
Zm00001d035040_P007	Maize	mitochondrion	76.05	20.76
EES01872	Sorghum	cytosol	69.75	20.62
Os01t0884400-01	Rice	plasma membrane	71.85	20.41
KRH68828	Soybean	cytosol	36.55	20.23
Zm00001d049708_P007	Maize	cytosol	74.37	20.07
KRG91959	Soybean	cytosol	52.94	19.97
KRH34817	Soybean	cytosol	52.52	19.78
KRG97080	Soybean	cytosol, nucleus	36.55	19.77
Bra012155.1-P	Field mustard	cytosol	54.62	19.73
CDY57440	Canola	cytosol	54.62	19.73
CDY12838	Canola	cytosol	55.46	18.88
KRG92593	Soybean	cytosol	34.87	18.74
KRG95672	Soybean	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	63.87	18.67
KRH29807	Soybean	cytosol	51.26	18.46
KRH24807	Soybean	cytosol	51.26	18.43
KRH67390	Soybean	cytosol, plastid	65.13	18.11
EES14396	Sorghum	cytosol	76.47	18.07
KRH33490	Soybean	cytosol	39.08	17.71
Zm00001d042608_P002	Maize	cytosol	68.49	17.62
CDY46092	Canola	endoplasmic reticulum, golgi, plasma membrane, plastid	76.05	17.52
KRH00831	Soybean	cytosol	46.22	17.32
KRG89279	Soybean	cytosol	47.06	17.2
KRG99581	Soybean	cytosol	33.19	17.14
KRH50347	Soybean	nucleus	47.06	17.13
KRH40395	Soybean	cytosol	45.38	17.01
KRH46608	Soybean	cytosol	32.35	16.7
KRG99865	Soybean	cytosol	42.44	16.37
CDY38931	Canola	cytosol	35.71	13.82
KRH42917	Soybean	mitochondrion	40.34	13.43
KRH73275	Soybean	cytosol	28.57	13.36
Bra032180.1-P	Field mustard	cytosol	32.77	13.36
KRH59027	Soybean	mitochondrion	39.92	13.29
KRH11061	Soybean	mitochondrion, plastid	39.92	13.27
KRH21208	Soybean	mitochondrion	39.92	13.27
KRH03317	Soybean	cytosol, plastid	33.61	11.83
KRH76105	Soybean	cytosol, plastid	32.35	10.97
KRH54418	Soybean	cytosol, plastid	30.25	10.54
KRH69547	Soybean	cytosol, plastid	30.67	10.24
KRH32190	Soybean	cytosol	24.37	8.75
KRH65448	Soybean	plastid	11.34	5.53

Protein Annotations

Gene3D:1.25.10.10	MapMan:35.1	UniProt:A0A0R0GFF0	EMBL:ACUP02009056	InterPro:ARM-like	InterPro:ARM-type_fold
InterPro:Armadillo	EnsemblPlantsGene:GLYMA_14G202000	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	InterPro:IPR000225
InterPro:IPR011989	EnsemblPlants:KRH17146	ProteinID:KRH17146	ProteinID:KRH17146.1	PFAM:PF00514	PFscan:PS50176
PANTHER:PTHR23315	PANTHER:PTHR23315:SF220	SMART:SM00185	SUPFAM:SSF48371	UniParc:UPI0006EDAC8A	SEG:seg

Description

hypothetical protein

Coordinates

chr14:-:46741879..46743234

Molecular Weight (calculated)

24847.1 Da

IEP (calculated)

6.679

GRAVY (calculated)

0.120

Length

238 amino acids

Sequence
(BLAST)

001: MDNRIVISNC GAISLIVDLL QSTDTTIQEH SVTTLLNLSI NDNNKAAIAN AGAIEPLIHV LQIGSPEAKE NSAATLFSLS VTEENKIRIG RAGAIRPLVD
101: LLGNGTPRGK KDAATALFNL SLFHENKDRI VQAGAVKNLV DLMDLAAGMV DKVVAVLANL ATIPEGKTAI GQQGGIPVLV EVIESGSARG KENAAAALLH
201: LCSDNHRYLN MVLQEGAVPP LVALSQSGKG QRKGLGSP

Best Arabidopsis Sequence Match ( AT2G23140.1 )
(BLAST)

001: MVEMEVLLRS ISSFLNLSSS KHIDLDPFEK YYKRVEELLR VLKPIADVVV TSDFVFDEKL GKAFEELTQD VDQSIDLFRS WQAFSSKVYF VLQIESLLPK
101: MRDTIVDTFQ FLMSSKNHLP DELSPASLEQ CLEKIKHLSY EEISSVIDGA LRDQRDGVGP SPEILVKIGE NTGLRSNQEI LIEAVALERQ KEMAEQSENN
201: AEVEFLDQLI VIVNRMHERL LLIKQTQTSS VAILADFFCP LSLEVMTDPV IVSSGQTYEK AFIKRWIDLG LKVCPKTRQT LTHTTLIPNY TVKALIANWC
301: ETNDVKLPDP NKSTSLNELS PLLSCTDSIP STGADVSARK VSNKSHDWDA SSSETGKPSF SSRATEREGA SPSRPASALG ASSPGISGNG YGLDARRGSL
401: NDFEDRSNDS RELRTDAPGR SSVSSTTRGS VENGQTSENH HHRSPSATST VSNEEFPRAD ANENSEESAH ATPYSSDASG EIRSGPLAAT TSAATRRDLS
501: DFSPKFMDRR TRGQFWRRPS ERLGSRIVSA PSNETRRDLS EVETQVKKLV EELKSSSLDT QRQATAELRL LAKHNMDNRI VIGNSGAIVL LVELLYSTDS
601: ATQENAVTAL LNLSINDNNK KAIADAGAIE PLIHVLENGS SEAKENSAAT LFSLSVIEEN KIKIGQSGAI GPLVDLLGNG TPRGKKDAAT ALFNLSIHQE
701: NKAMIVQSGA VRYLIDLMDP AAGMVDKAVA VLANLATIPE GRNAIGQEGG IPLLVEVVEL GSARGKENAA AALLQLSTNS GRFCNMVLQE GAVPPLVALS
801: QSGTPRAREK AQALLSYFRN QRHGNAGRG

Arabidopsis Description

RING-type E3 ubiquitin transferase [Source:UniProtKB/TrEMBL;Acc:F4ILG6]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.