Factsheet for Zm00001d035040_P007

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 1
mitochondrion 4
plasma membrane 3
extracellular 1
endoplasmic reticulum 1
vacuole 1
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion
Any Predictor:	mitochondrion, plastid, secretory
ChloroP:	plastid
iPSORT:	mitochondrion
MultiLoc:	plasma membrane
Predotar:	mitochondrion
PProwler:	secretory
TargetP:	mitochondrion
WoLF PSORT:	mitochondrion
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os08t0110500-01	Rice	plasma membrane	80.05	84.71
Zm00001d049708_P007	Maize	cytosol	85.21	84.24
TraesCS3B01G443200.1	Wheat	cytosol, endoplasmic reticulum	24.43	83.86
TraesCS3D01G527900.1	Wheat	cytosol	77.64	81.47
TraesCS3A01G521300.1	Wheat	cytosol	77.52	81.35
TraesCS3B01G591000.1	Wheat	cytosol	76.95	80.75
HORVU3Hr1G113910.3	Barley	cytosol	76.83	79.95
EES14396	Sorghum	cytosol	91.28	79.05
TraesCS3D01G382500.1	Wheat	cytosol	39.45	77.83
TraesCS3A01G390200.1	Wheat	cytosol	38.99	77.45
TraesCS3B01G422200.1	Wheat	cytosol	38.99	76.92
HORVU3Hr1G081380.1	Barley	cytosol	38.99	76.92
KRH17146	Soybean	cytosol	20.76	76.05
GSMUA_Achr9P12570_001	Banana	cytosol	25.69	74.67
GSMUA_Achr4P01530_001	Banana	plasma membrane	45.53	64.98
Solyc01g014230.2.1	Tomato	cytosol	49.89	53.64
PGSC0003DMT400046295	Potato	cytosol	49.54	52.62
VIT_07s0129g00590.t01	Wine grape	cytosol	50.92	52.36
CDX76873	Canola	cytosol, plastid	44.15	51.54
Solyc12g100000.1.1	Tomato	cytosol, plastid	48.17	51.28
KRH30135	Soybean	cytosol	49.08	51.07
KRG98177	Soybean	cytosol	49.08	50.89
TraesCS3A01G410000.1	Wheat	cytosol	36.35	50.0
TraesCS3B01G443500.1	Wheat	cytosol	29.7	48.96
TraesCS3A01G410100.1	Wheat	cytosol	29.7	48.96
KRH72794	Soybean	plasma membrane	45.64	48.95
AT2G23140.1	Thale cress	cytosol	46.45	48.85
PGSC0003DMT400027406	Potato	cytosol	14.56	47.57
CDY18649	Canola	cytosol, plastid	38.07	46.63
CDX81323	Canola	cytosol, plastid	38.65	46.61
Bra037117.1-P	Field mustard	cytosol, plastid	38.42	45.64
AT5G67340.1	Thale cress	cytosol	36.93	45.54
Bra032180.1-P	Field mustard	cytosol	28.21	42.12
Zm00001d042608_P002	Maize	cytosol	44.27	41.73
CDY38931	Canola	cytosol	29.36	41.63
Bra012155.1-P	Field mustard	cytosol	31.08	41.12
CDY57440	Canola	cytosol	31.08	41.12
Zm00001d021978_P001	Maize	cytosol	16.97	40.88
Zm00001d006726_P001	Maize	cytosol	16.74	40.56
CDY12838	Canola	cytosol	32.45	40.49
CDY46092	Canola	endoplasmic reticulum, golgi, plasma membrane, plastid	44.5	37.56
Zm00001d045632_P004	Maize	cytosol, mitochondrion	26.15	36.19
Zm00001d006705_P001	Maize	plastid	19.04	35.78
Zm00001d021951_P001	Maize	plastid	19.04	35.7
Zm00001d016501_P001	Maize	cytosol	16.97	31.83
Zm00001d041548_P002	Maize	cytosol	24.43	31.7
Zm00001d031263_P001	Maize	cytosol	23.39	31.63
Zm00001d030732_P001	Maize	cytosol	24.08	31.58
Zm00001d000381_P001	Maize	cytosol	22.59	30.88
Zm00001d014845_P001	Maize	cytosol	22.59	30.73
Zm00001d028623_P001	Maize	cytosol	25.57	30.72
Zm00001d003967_P001	Maize	plastid	13.88	26.89
Zm00001d038471_P001	Maize	cytosol, plasma membrane, plastid	19.38	25.22
Zm00001d043043_P001	Maize	cytosol	18.69	24.59
Zm00001d012494_P001	Maize	cytosol	18.46	24.28
Zm00001d016225_P001	Maize	plastid	19.5	23.32
Zm00001d053544_P001	Maize	mitochondrion, plastid	18.81	23.26
Zm00001d050308_P001	Maize	mitochondrion, plasma membrane	17.78	22.33
Zm00001d020332_P001	Maize	cytosol	17.2	21.49

Protein Annotations

Gene3D:1.25.10.10	EntrezGene:100501378	Gene3D:3.30.40.10	MapMan:35.1	UniProt:A0A1D6LDT6	ProteinID:AQK78158.1
ProteinID:AQK78162.1	InterPro:ARM-like	InterPro:ARM-type_fold	InterPro:Armadillo	GO:GO:0003674	GO:GO:0003824
GO:GO:0004842	GO:GO:0005488	GO:GO:0005515	GO:GO:0006464	GO:GO:0008150	GO:GO:0008152
GO:GO:0009987	GO:GO:0016567	GO:GO:0016740	GO:GO:0019538	InterPro:IPR000225	InterPro:IPR003613
InterPro:IPR011989	InterPro:IPR013083	PFAM:PF00514	PFAM:PF04564	PFscan:PS50176	PFscan:PS51698
PANTHER:PTHR23315	PANTHER:PTHR23315:SF220	SMART:SM00185	SMART:SM00504	SUPFAM:SSF48371	SUPFAM:SSF57850
UniParc:UPI000844D717	InterPro:Ubox_domain	EnsemblPlantsGene:Zm00001d035040	EnsemblPlants:Zm00001d035040_P007	EnsemblPlants:Zm00001d035040_T007	InterPro:Znf_RING/FYVE/PHD
SEG:seg	:	:	:	:	:

Description

Putative ARM repeat-containing protein containing family protein isoform 1%3B Putative ARM repeat-containing protein containing family protein isoform 2%3B Putative ARM repeat-containing protein containing family protein isoform 3

Coordinates

chr6:+:2922995..2930058

Molecular Weight (calculated)

94369.4 Da

IEP (calculated)

6.160

GRAVY (calculated)

-0.174

Length

872 amino acids

Sequence
(BLAST)

001: MCLVRTYCIF LMRLQTTYMN VLSFSVILSS RSLALTCMCS STVLMDNLSP STLLNSITCL GALTSDVSTV RPKPVQKYCK NVYDISSIVN PLLEDLCKSP
101: EEQLNEVLRD LDTAVNEASG LIGNWHQTTG KICFGWQIES VISDIQGCSL QLCQLVHSLL PSLTARACTC IEKLQDINYE HLFDLVKEVA MELAETGAVS
201: SENLLKLSSL LSLSTNMELY MEAVSLENLR TRALRSENRE ELELAEQMIP LVNYMHDHLL REKQQLSING VPIPPDFCCP LSLELMSDPV IVASGQTYER
301: VYIKLWLDEG FTICPKTRQR LGHSNLIPNY TVKALIANWC ESHDIRLPDP IKSLKLNFPS AASSLQDLSA AGGSPLHPTL VSRSNIPGSP EADVHLRNLN
401: GASSPRSLAN QNSHVHANRP GHEVSTSQTS ENANGSAPDV SRLSLAGSET RESSMEAKRA GSIGQMSEHS TDEAFQSSNL DRNLQDNLAS SSLNGSLPNS
501: GQLDGECDNG VTRVPSDRTN YSSDASGEVT DGGAAPVASS VPQREHLIPA RLGTRQFIRR QPSDRGFPRI ISSSTMDTRS DLSAIENQVR KLIDDLKSDS
601: IDVQRSAASD LRSLAKHNME NRIVIANCGA VNVLVGLLHS PDAKTQEHAV TALLNLSIND NNKIAIANAD AVDPLIHVLE TGNPEAKENS AATLFSLSVV
701: EENKVRIGRS GAIKPLVDLL GNGTPRGKKD AATALFNLSI LHENKARIVQ ADAVQHLVEL MDPAAGMVDK AVAVLANLAT IPEGRNAIGQ ARGIPALVEV
801: VELGSARGKE NAAAALLQLC TNSNRFCSIV LQEGAVPPLV ALSQSGTPRA REKAQALLSY FRSQRHGNSA RR

Best Arabidopsis Sequence Match ( AT2G23140.4 )
(BLAST)

001: MEVLLRSISS FLNLSSSKHI DLDPFEKYYK RVEELLRVLK PIADVVVTSD FVFDEKLGKA FEELTQDVDQ SIDLFRSWQA FSSKVYFVLQ IESLLPKMRD
101: TIVDTFQFLM SSKNHLPDEL SPASLEQCLE KIKHLSYEEI SSVIDGALRD QRDGVGPSPE ILVKIGENTG LRSNQEILIE AVALERQKEM AEQSENNAEV
201: EFLDQLIVIV NRMHERLLLI KQTQTSSVAI LADFFCPLSL EVMTDPVIVS SGQTYEKAFI KRWIDLGLKV CPKTRQTLTH TTLIPNYTVK ALIANWCETN
301: DVKLPDPNKS TSLNELSPLL SCTDSIPSTG ADVSARKVSN KSHDWDASSS ETGKPSFSSR ATEREGASPS RPASALGASS PGISGNGYGL DARRGSLNDF
401: EDRSNDSREL RTDAPGRSSV SSTTRGSVEN GQTSENHHHR SPSATSTVSN EEFPRADANE NSEESAHATP YSSDASGEIR SGPLAATTSA ATRRDLSDFS
501: PKFMDRRTRG QFWRRPSERL GSRIVSAPSN ETRRDLSEVE TQVKKLVEEL KSSSLDTQRQ ATAELRLLAK HNMDNRIVIG NSGAIVLLVE LLYSTDSATQ
601: ENAVTALLNL SINDNNKKAI ADAGAIEPLI HVLENGSSEA KENSAATLFS LSVIEENKIK IGQSGAIGPL VDLLGNGTPR GKKDAATALF NLSIHQENKA
701: MIVQSGAVRY LIDLMDPAAG MVDKAVAVLA NLATIPEGRN AIGQEGGIPL LVEVVELGSA RGKENAAAAL LQLSTNSGRF CNMVLQEGAV PPLVALSQSG
801: TPRAREKAQA LLSYFRNQRH GNAGRG

Arabidopsis Description

RING-type E3 ubiquitin transferase [Source:UniProtKB/TrEMBL;Acc:F4ILG6]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.