Factsheet for Zm00001d049708_P007

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 1
cytosol 2
mitochondrion 1
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, plastid
iPSORT:	plastid
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d035040_P007	Maize	mitochondrion	84.24	85.21
Os08t0110500-01	Rice	plasma membrane	75.85	81.19
TraesCS3D01G527900.1	Wheat	cytosol	73.92	78.46
TraesCS3A01G521300.1	Wheat	cytosol	73.7	78.22
TraesCS3B01G591000.1	Wheat	cytosol	73.36	77.86
HORVU3Hr1G113910.3	Barley	cytosol	73.7	77.57
TraesCS3B01G443200.1	Wheat	cytosol, endoplasmic reticulum	22.34	77.56
TraesCS3D01G382500.1	Wheat	cytosol	37.64	75.11
TraesCS3A01G390200.1	Wheat	cytosol	37.07	74.49
HORVU3Hr1G081380.1	Barley	cytosol	37.3	74.43
KRH17146	Soybean	cytosol	20.07	74.37
TraesCS3B01G422200.1	Wheat	cytosol	37.07	73.98
GSMUA_Achr9P12570_001	Banana	cytosol	24.15	71.0
GSMUA_Achr4P01530_001	Banana	plasma membrane	42.86	61.87
Solyc01g014230.2.1	Tomato	cytosol	47.05	51.17
VIT_07s0129g00590.t01	Wine grape	cytosol	48.41	50.35
PGSC0003DMT400046295	Potato	cytosol	46.71	50.18
KRG98177	Soybean	cytosol	47.28	49.58
KRH30135	Soybean	cytosol	46.83	49.28
CDX76873	Canola	cytosol, plastid	41.38	48.86
Solyc12g100000.1.1	Tomato	cytosol, plastid	45.24	48.72
TraesCS3A01G410000.1	Wheat	cytosol	34.81	48.42
TraesCS3B01G443500.1	Wheat	cytosol	29.02	48.39
TraesCS3A01G410100.1	Wheat	cytosol	29.02	48.39
PGSC0003DMT400027406	Potato	cytosol	14.63	48.31
KRH72794	Soybean	plasma membrane	43.08	46.74
AT2G23140.1	Thale cress	cytosol	43.31	46.08
CDX81323	Canola	cytosol, plastid	36.73	44.81
CDY18649	Canola	cytosol, plastid	36.17	44.8
Bra037117.1-P	Field mustard	cytosol, plastid	36.51	43.87
AT5G67340.1	Thale cress	cytosol	34.81	43.42
Bra032180.1-P	Field mustard	cytosol	27.32	41.27
CDY38931	Canola	cytosol	28.46	40.81
Zm00001d042608_P002	Maize	cytosol	42.06	40.11
Bra012155.1-P	Field mustard	cytosol	29.93	40.06
CDY57440	Canola	cytosol	29.93	40.06
Zm00001d021978_P001	Maize	cytosol	16.33	39.78
CDY12838	Canola	cytosol	31.41	39.63
Zm00001d006726_P001	Maize	cytosol	16.1	39.44
Zm00001d045632_P004	Maize	cytosol, mitochondrion	25.28	35.4
CDY46092	Canola	endoplasmic reticulum, golgi, plasma membrane, plastid	41.27	35.24
Zm00001d006705_P001	Maize	plastid	17.69	33.62
Zm00001d021951_P001	Maize	plastid	17.69	33.55
Zm00001d041548_P002	Maize	cytosol	23.47	30.8
Zm00001d016501_P001	Maize	cytosol	16.21	30.75
Zm00001d031263_P001	Maize	cytosol	22.34	30.54
Zm00001d030732_P001	Maize	cytosol	23.02	30.53
Zm00001d028623_P001	Maize	cytosol	24.72	30.03
Zm00001d000381_P001	Maize	cytosol	21.66	29.94
Zm00001d014845_P001	Maize	cytosol	21.66	29.8
Zm00001d003967_P001	Maize	plastid	13.38	26.22
Zm00001d038471_P001	Maize	cytosol, plasma membrane, plastid	17.91	23.58
Zm00001d043043_P001	Maize	cytosol	17.69	23.53
Zm00001d012494_P001	Maize	cytosol	17.57	23.38
Zm00001d053544_P001	Maize	mitochondrion, plastid	18.25	22.84
Zm00001d016225_P001	Maize	plastid	18.82	22.77
Zm00001d050308_P001	Maize	mitochondrion, plasma membrane	16.78	21.33
Zm00001d020332_P001	Maize	cytosol	16.1	20.34

Protein Annotations

Gene3D:1.25.10.10	EntrezGene:103653150	Gene3D:3.30.40.10	MapMan:35.1	UniProt:A0A1D6PXB6	ProteinID:AQK51152.1
InterPro:ARM-like	InterPro:ARM-type_fold	InterPro:Armadillo	GO:GO:0003674	GO:GO:0003824	GO:GO:0004842
GO:GO:0005488	GO:GO:0005515	GO:GO:0006464	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987
GO:GO:0016567	GO:GO:0016740	GO:GO:0019538	InterPro:IPR000225	InterPro:IPR003613	InterPro:IPR011989
InterPro:IPR013083	PFAM:PF00514	PFAM:PF04564	PFscan:PS50176	PFscan:PS51698	PANTHER:PTHR23315
PANTHER:PTHR23315:SF220	SMART:SM00185	SMART:SM00504	SUPFAM:SSF48371	SUPFAM:SSF57850	UniParc:UPI0008426ED7
InterPro:Ubox_domain	EnsemblPlantsGene:Zm00001d049708	EnsemblPlants:Zm00001d049708_P007	EnsemblPlants:Zm00001d049708_T007	InterPro:Znf_RING/FYVE/PHD	SEG:seg

Description

Putative ARM repeat-containing protein containing family protein

Coordinates

chr4:-:40976609..40983654

Molecular Weight (calculated)

95399.9 Da

IEP (calculated)

5.596

GRAVY (calculated)

-0.098

Length

882 amino acids

Sequence
(BLAST)

001: MDNLSPATLL NSISCLGALT SDVSTARPKP IHKYCKNVYD ISSIVTPLLE DLCKSPEEQL DEVLRDLDTA VNEASGLIGN WHQTTSKMYF GWRIESVISD
101: IQGCSLQLCQ LVNSLLPSLT ARACMCIEKL QDINHEHVFD LVKEVAMELA ATSAVSSVNL LKLSSLLSLS TNMELYTEAV SLENLKTRAL RCESREELDL
201: AEQMIPLVNY MHDHLLKEKQ QLSINGVPIP ADFCCPLSLE LMSDPVIVAS GQTYERVYIK LWLDEGFTIC PKTLQRLGHS NLIPNYTVKA LIANWCESHD
301: IRLPDPMKSL KLNFPSAASF LEDLSAADGS PLHPIVVSRA NIPGSPEVDV YLRNLNGASP PHSLVNQNSH AHANRHGHEV STSQTSEKTN GSVPDVSRLS
401: LASSEARESS LEGRRGGSIG QISEHSTEEA FQSSNLDRDL QDNLANSSLN GSLPNSGQLD GECDNGVTRV PSDRTNYSSD ASGEVTNGGG APVASSVPQR
501: EHLIPPRLGM GTKQFIRRQP SDRGFPRIIS SSTMDARSDL SAIENQVRKL IDDLKSDSID VQRSAASDLR LLSKHNMENR IAIANCGAVN LLVGRLHSPD
601: AKTQEHAVTA LLNLSINDNN KIAIANADAV DPLIHVLETG NPEAKENSAA TLFSLSVIEE NKVKIGRSGA IKPLVDLLGN GTPRGKRDAA TALFNLSILH
701: ENKARIVQAD AVNHLVELMD PAAGMVDKAV AVLANLATIP EGRNAIGQAR GIPALVEVVE LGSARGKENA AAALLQLCTN SNRFCSIVLQ EGAVPPLVAL
801: SQSGTSASEL LPQPKTWEFS KEIAFCFFPF FVVVYIKRCI LCPSSRLGSC LLLLIGTGRC VGWNYAVPCA LFIDGDCYAH LM

Best Arabidopsis Sequence Match ( AT2G23140.1 )
(BLAST)

001: MVEMEVLLRS ISSFLNLSSS KHIDLDPFEK YYKRVEELLR VLKPIADVVV TSDFVFDEKL GKAFEELTQD VDQSIDLFRS WQAFSSKVYF VLQIESLLPK
101: MRDTIVDTFQ FLMSSKNHLP DELSPASLEQ CLEKIKHLSY EEISSVIDGA LRDQRDGVGP SPEILVKIGE NTGLRSNQEI LIEAVALERQ KEMAEQSENN
201: AEVEFLDQLI VIVNRMHERL LLIKQTQTSS VAILADFFCP LSLEVMTDPV IVSSGQTYEK AFIKRWIDLG LKVCPKTRQT LTHTTLIPNY TVKALIANWC
301: ETNDVKLPDP NKSTSLNELS PLLSCTDSIP STGADVSARK VSNKSHDWDA SSSETGKPSF SSRATEREGA SPSRPASALG ASSPGISGNG YGLDARRGSL
401: NDFEDRSNDS RELRTDAPGR SSVSSTTRGS VENGQTSENH HHRSPSATST VSNEEFPRAD ANENSEESAH ATPYSSDASG EIRSGPLAAT TSAATRRDLS
501: DFSPKFMDRR TRGQFWRRPS ERLGSRIVSA PSNETRRDLS EVETQVKKLV EELKSSSLDT QRQATAELRL LAKHNMDNRI VIGNSGAIVL LVELLYSTDS
601: ATQENAVTAL LNLSINDNNK KAIADAGAIE PLIHVLENGS SEAKENSAAT LFSLSVIEEN KIKIGQSGAI GPLVDLLGNG TPRGKKDAAT ALFNLSIHQE
701: NKAMIVQSGA VRYLIDLMDP AAGMVDKAVA VLANLATIPE GRNAIGQEGG IPLLVEVVEL GSARGKENAA AALLQLSTNS GRFCNMVLQE GAVPPLVALS
801: QSGTPRAREK AQALLSYFRN QRHGNAGRG

Arabidopsis Description

RING-type E3 ubiquitin transferase [Source:UniProtKB/TrEMBL;Acc:F4ILG6]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.