Factsheet for Zm00001d006705_P001

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 7
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	cytosol
Predotar:	plastid
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d021951_P001	Maize	plastid	92.03	91.83
EER97453	Sorghum	plastid	92.46	91.67
Os07t0584900-01	Rice	plastid	85.78	85.22
TraesCS2D01G197200.1	Wheat	plastid	83.19	84.1
HORVU2Hr1G036080.15	Barley	plastid	82.97	84.06
TraesCS2A01G190800.1	Wheat	cytosol	78.88	83.94
TraesCS2B01G216300.1	Wheat	plastid	82.76	83.84
HORVU7Hr1G038870.1	Barley	plastid	50.43	81.53
GSMUA_Achr4P06990_001	Banana	plastid	61.21	70.47
GSMUA_Achr4P11070_001	Banana	cytosol	59.05	64.93
GSMUA_Achr3P29830_001	Banana	cytosol	57.76	64.42
GSMUA_Achr1P22790_001	Banana	mitochondrion	59.7	61.15
VIT_00s2269g00010.t01	Wine grape	plastid	54.53	55.97
KRH51173	Soybean	cytosol	50.22	54.44
PGSC0003DMT400060674	Potato	plastid	52.8	54.32
Solyc04g014810.2.1	Tomato	plastid	52.37	53.88
KRH36562	Soybean	plastid	53.02	53.71
KRH01984	Soybean	cytosol	49.14	53.65
KRH11541	Soybean	plastid	52.8	53.61
Solyc11g012440.1.1	Tomato	cytosol, plastid	53.02	53.59
PGSC0003DMT400034564	Potato	nucleus, plastid	52.59	53.28
CDY09688	Canola	cytosol	51.08	52.2
Bra012713.1-P	Field mustard	cytosol	51.08	52.09
CDX90518	Canola	plastid	51.08	52.09
Bra038470.1-P	Field mustard	plastid	51.72	51.28
AT4G16490.1	Thale cress	plastid	51.08	50.21
Zm00001d006726_P001	Maize	cytosol	34.7	44.72
Zm00001d021978_P001	Maize	cytosol	34.48	44.2
Zm00001d003967_P001	Maize	plastid	27.37	28.22
Zm00001d016501_P001	Maize	cytosol	22.2	22.15
Zm00001d000381_P001	Maize	cytosol	28.45	20.69
Zm00001d045632_P004	Maize	cytosol, mitochondrion	27.59	20.32
Zm00001d035040_P007	Maize	mitochondrion	35.78	19.04
Zm00001d041548_P002	Maize	cytosol	26.51	18.3
Zm00001d030732_P001	Maize	cytosol	26.08	18.2
Zm00001d049708_P007	Maize	cytosol	33.62	17.69
Zm00001d042608_P002	Maize	cytosol	35.13	17.62
Zm00001d028623_P001	Maize	cytosol	27.37	17.49
Zm00001d031263_P001	Maize	cytosol	23.28	16.74
Zm00001d038471_P001	Maize	cytosol, plasma membrane, plastid	23.28	16.12
Zm00001d014845_P001	Maize	cytosol	21.98	15.91
Zm00001d043043_P001	Maize	cytosol	22.2	15.54
Zm00001d020332_P001	Maize	cytosol	23.28	15.47
Zm00001d012494_P001	Maize	cytosol	21.98	15.38
Zm00001d016225_P001	Maize	plastid	23.06	14.68
Zm00001d053544_P001	Maize	mitochondrion, plastid	21.98	14.47
Zm00001d050308_P001	Maize	mitochondrion, plasma membrane	21.34	14.27

Protein Annotations

EnsemblPlants:Zm00001d006705_P001	EnsemblPlants:Zm00001d006705_T001	EnsemblPlantsGene:Zm00001d006705	Gene3D:1.25.10.10	GO:GO:0003674	GO:GO:0005488
GO:GO:0005515	InterPro:ARM-like	InterPro:ARM-type_fold	InterPro:Armadillo	InterPro:IPR000225	InterPro:IPR011989
PANTHER:PTHR23315	PANTHER:PTHR23315:SF129	PFAM:PF00514	PFscan:PS50176	ProteinID:ONM24757.1	SEG:seg
SMART:SM00185	SUPFAM:SSF48371	UniParc:UPI0008449E2E	UniProt:A0A1D6EZQ7	MapMan:35.1	:

Description

ARM repeat superfamily protein

Coordinates

chr2:+:214797523..214800816

Molecular Weight (calculated)

47720.1 Da

IEP (calculated)

9.157

GRAVY (calculated)

0.003

Length

464 amino acids

Sequence
(BLAST)

001: MVSLAGSQIP SPSRGQSPCA AARPQRRQGH SMRTIRSALL QPDSSPVPAD GGADAGDSDI ENLTDSVIDF RLRELAATAG PAHPAAVAKS SSAINAAATE
101: LLDLSRDFSD YSSFNSDISG ELERLASATG ARAAPRPGPG AAAVVDLNDL ESMDLSADAA PLERLEPFVR ACVRALGPGA GPDARRAAAA RIRLLAKHRS
201: DVRELIGVSG AIPALVPLLR STDPVAQESA ATALLNLSLE DRNRSAITTA GAIKPLVYAL RTGTAPAKQN AACALLSLSG IEDNRATIGA CGAIPPLVAL
301: LSAASTRGKK DALTTLYRLC SARRNKERAV SAGAVVPLVH LVGRRGSGTC EKAMVVLGSL AGIDEGRQAV VQAGGIPALV EAIEDGPARE KELAVVALLQ
401: VCSDSPRNRA LLVREGAIPP LVALSQSGSA RAKHKAETLL GYLREQRQGF GCRAGAVVAT SLAR

Best Arabidopsis Sequence Match ( AT4G16490.1 )
(BLAST)

001: MVSVEEPLSH SNSTRFPLTT DFYGSSSPSA ARLHRQAGRS MRTVRSNFYQ SGDQSCSFVG SIGDKSEYAS EFLSDSVIDM RLGELALKNS NSLNSNASSM
101: KEEAFLDISQ AFSDFSACSS DISGELQRLA CLPSPEADRN ESGGDNEAEH DPELEREPCL GFLQRENFST EIIECISPED LQPTVKLCID GLRSSSVAIK
201: RSAAAKLRLL AKNRADNRVL IGESGAIQAL IPLLRCNDPW TQEHAVTALL NLSLHDQNKA VIAAGGAIKS LVWVLKTGTE TSKQNAACAL LSLALLEENK
301: GSIGACGAIP PLVSLLLNGS CRGKKDALTT LYKLCTLQQN KERAVTAGAV KPLVDLVAEE GTGMAEKAMV VLSSLAAIDD GKEAIVEEGG IAALVEAIED
401: GSVKGKEFAI LTLLQLCSDS VRNRGLLVRE GAIPPLVGLS QSGSVSVRAK RKAERLLGYL REPRKEASSS SP

Arabidopsis Description

ARM repeat superfamily protein [Source:UniProtKB/TrEMBL;Acc:F4JMH0]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.