Factsheet for TraesCS2B01G216300.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 6
mitochondrion 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2D01G197200.1	Wheat	plastid	99.13	98.91
HORVU2Hr1G036080.15	Barley	plastid	98.03	98.03
TraesCS2A01G190800.1	Wheat	cytosol	93.23	97.94
HORVU7Hr1G038870.1	Barley	plastid	58.3	93.03
Os07t0584900-01	Rice	plastid	89.52	87.79
Zm00001d021951_P001	Maize	plastid	88.86	87.53
EER97453	Sorghum	plastid	89.08	87.18
Zm00001d006705_P001	Maize	plastid	83.84	82.76
GSMUA_Achr4P06990_001	Banana	plastid	62.23	70.72
GSMUA_Achr4P11070_001	Banana	cytosol	60.92	66.11
GSMUA_Achr3P29830_001	Banana	cytosol	58.08	63.94
GSMUA_Achr1P22790_001	Banana	mitochondrion	60.92	61.59
VIT_00s2269g00010.t01	Wine grape	plastid	54.8	55.53
Solyc04g014810.2.1	Tomato	plastid	54.15	54.99
PGSC0003DMT400060674	Potato	plastid	53.93	54.77
KRH51173	Soybean	cytosol	50.66	54.21
KRH01984	Soybean	cytosol	50.0	53.88
Solyc11g012440.1.1	Tomato	cytosol, plastid	53.71	53.59
PGSC0003DMT400034564	Potato	nucleus, plastid	53.06	53.06
KRH36562	Soybean	plastid	52.62	52.62
KRH11541	Soybean	plastid	51.97	52.08
Bra012713.1-P	Field mustard	cytosol	51.09	51.43
CDX90518	Canola	plastid	51.09	51.43
CDY09688	Canola	cytosol	50.66	51.1
Bra038470.1-P	Field mustard	plastid	51.31	50.21
AT4G16490.1	Thale cress	plastid	50.66	49.15
TraesCS3B01G443200.1	Wheat	cytosol, endoplasmic reticulum	26.86	48.43
TraesCS2B01G213900.1	Wheat	cytosol	34.72	44.04
TraesCS3B01G422200.1	Wheat	cytosol	33.84	35.07
TraesCS6B01G222200.1	Wheat	cytosol	23.58	25.78
TraesCS3B01G443500.1	Wheat	cytosol	27.29	23.63
TraesCS6B01G324000.1	Wheat	cytosol	29.69	21.15
TraesCS3B01G591000.1	Wheat	cytosol	37.77	20.82
TraesCS2B01G294100.1	Wheat	nucleus	19.21	19.13
TraesCS5B01G087500.1	Wheat	cytosol	26.86	18.04
TraesCS7B01G186600.1	Wheat	cytosol	24.67	17.55
TraesCS1B01G310100.1	Wheat	plastid	25.11	17.06
TraesCS4B01G206900.1	Wheat	plastid	28.17	16.84
TraesCS3B01G377600.1	Wheat	plastid	24.67	16.45
TraesCS7B01G473200.1	Wheat	cytosol	22.27	15.13
TraesCS5B01G197400.1	Wheat	cytosol, plasma membrane, plastid	23.14	15.12
TraesCS2B01G499300.1	Wheat	plasma membrane	22.05	14.66

Protein Annotations

EnsemblPlants:TraesCS2B01G216300.1	EnsemblPlantsGene:TraesCS2B01G216300	Gene3D:1.25.10.10	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515
InterPro:ARM-like	InterPro:ARM-type_fold	InterPro:Armadillo	InterPro:IPR000225	InterPro:IPR011989	PANTHER:PTHR23315
PANTHER:PTHR23315:SF129	PFAM:PF00514	PFscan:PS50176	SEG:seg	SMART:SM00185	SUPFAM:SSF48371
MapMan:35.1	:	:	:	:	:

Description

No Description!

Coordinates

chr2B:-:202154988..202157126

Molecular Weight (calculated)

47242.4 Da

IEP (calculated)

7.069

GRAVY (calculated)

-0.003

Length

458 amino acids

Sequence
(BLAST)

001: MVSLAGSQIL SPKQRPCAPR RPGHSMRTIR SALLHPDSPP GPSSRLRAAD EGDSDIENLT DSVIDFRLSE LAATAGPAHP AAVAKSSSAN AAATEMLELS
101: RDFSDYSSFN SDISGELERL AAAAATPRSD APDLAAVDLN DLESMDLSAD AAPLDRVEPF VLACVQALGP DAAPDARRTA AARIRLLAKH RSDIRELVGV
201: SGAIPALVPL LRSTDPVAQE NAVTALLNLS LEERNRSAIT AAGAIKPLVY ALRTGTASAK QNAACALLSL SGIEENRATI GACGAVAPLV ALLSAGSTRG
301: KKDALTTLYR LCSARRNKER AVSAGAVVPL VHLIGERGTG TSEKAMVVLA SLASIAEGRD AVVEAGGIPA LVETIEDGPA REKEFAVVAL LQLCSECSSN
401: RALLVREGAI PPLVALSQSG SARAKHKAET LLGYLREQRQ GGGGCRAGPG GAATSMAR

Best Arabidopsis Sequence Match ( AT4G16490.1 )
(BLAST)

001: MVSVEEPLSH SNSTRFPLTT DFYGSSSPSA ARLHRQAGRS MRTVRSNFYQ SGDQSCSFVG SIGDKSEYAS EFLSDSVIDM RLGELALKNS NSLNSNASSM
101: KEEAFLDISQ AFSDFSACSS DISGELQRLA CLPSPEADRN ESGGDNEAEH DPELEREPCL GFLQRENFST EIIECISPED LQPTVKLCID GLRSSSVAIK
201: RSAAAKLRLL AKNRADNRVL IGESGAIQAL IPLLRCNDPW TQEHAVTALL NLSLHDQNKA VIAAGGAIKS LVWVLKTGTE TSKQNAACAL LSLALLEENK
301: GSIGACGAIP PLVSLLLNGS CRGKKDALTT LYKLCTLQQN KERAVTAGAV KPLVDLVAEE GTGMAEKAMV VLSSLAAIDD GKEAIVEEGG IAALVEAIED
401: GSVKGKEFAI LTLLQLCSDS VRNRGLLVRE GAIPPLVGLS QSGSVSVRAK RKAERLLGYL REPRKEASSS SP

Arabidopsis Description

ARM repeat superfamily protein [Source:UniProtKB/TrEMBL;Acc:F4JMH0]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.