CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 7
cytosol 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra012713.1-P	Field mustard	cytosol	98.24	98.24
CDY09688	Canola	cytosol	94.51	94.71
AT4G16490.1	Thale cress	plastid	87.69	84.53
VIT_00s2269g00010.t01	Wine grape	plastid	71.87	72.35
KRH11541	Soybean	plastid	72.09	71.77
KRH51173	Soybean	cytosol	67.25	71.5
KRH36562	Soybean	plastid	71.87	71.4
KRH01984	Soybean	cytosol	66.37	71.06
PGSC0003DMT400034564	Potato	nucleus, plastid	69.89	69.43
Solyc11g012440.1.1	Tomato	cytosol, plastid	69.45	68.85
PGSC0003DMT400060674	Potato	plastid	67.91	68.51
Solyc04g014810.2.1	Tomato	plastid	67.69	68.29
HORVU7Hr1G038870.1	Barley	plastid	36.26	57.49
GSMUA_Achr4P06990_001	Banana	plastid	49.89	56.33
GSMUA_Achr4P11070_001	Banana	cytosol	50.55	54.5
GSMUA_Achr3P29830_001	Banana	cytosol	49.45	54.09
CDY28679	Canola	cytosol	30.99	53.61
GSMUA_Achr1P22790_001	Banana	mitochondrion	52.31	52.54
HORVU2Hr1G036080.15	Barley	plastid	52.31	51.97
Os07t0584900-01	Rice	plastid	53.19	51.82
TraesCS2A01G190800.1	Wheat	cytosol	49.45	51.61
EER97453	Sorghum	plastid	52.97	51.5
Zm00001d021951_P001	Maize	plastid	52.53	51.4
TraesCS2D01G197200.1	Wheat	plastid	51.65	51.2
TraesCS2B01G216300.1	Wheat	plastid	51.43	51.09
Zm00001d006705_P001	Maize	plastid	52.09	51.08
CDX74298	Canola	plastid	38.9	50.0
CDX91947	Canola	plastid	38.02	49.01
CDY32692	Canola	peroxisome	37.14	47.88
CDY02828	Canola	cytosol	36.7	47.18
CDY18649	Canola	cytosol, plastid	34.29	21.91
CDX81323	Canola	cytosol, plastid	34.73	21.85
CDX73449	Canola	cytosol	33.41	21.59
CDX76873	Canola	cytosol, plastid	35.38	21.55
CDY57440	Canola	cytosol	31.21	21.55
CDX78262	Canola	cytosol	32.97	21.37
CDX78273	Canola	cytosol	29.67	21.29
CDX74050	Canola	cytosol	20.88	20.83
CDY02891	Canola	cytosol	33.63	20.76
CDY12838	Canola	cytosol	31.65	20.6
CDY21412	Canola	cytosol, endoplasmic reticulum	27.47	20.56
CDY04746	Canola	cytosol, endoplasmic reticulum	27.47	20.53
CDY25764	Canola	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	26.37	20.41
CDY12497	Canola	cytosol	26.59	20.27
CDY08002	Canola	cytosol	20.22	20.22
CDY64696	Canola	cytosol, extracellular, mitochondrion, plastid	32.75	20.19
CDX96295	Canola	cytosol, plasma membrane	27.25	20.13
CDX72769	Canola	cytosol	27.03	20.1
CDY68352	Canola	cytosol	19.78	19.74
CDY28059	Canola	cytosol	20.0	19.7
CDY71737	Canola	cytosol	19.78	19.48
CDX77213	Canola	cytosol	27.03	19.13
CDX99112	Canola	cytosol	27.47	19.08
CDX86080	Canola	cytosol	27.47	19.05
CDY31736	Canola	cytosol	26.81	19.0
CDX68379	Canola	cytosol	27.47	19.0
CDY38506	Canola	cytosol	18.68	18.64
CDY68037	Canola	cytosol	26.15	18.17
CDX95193	Canola	cytosol	25.93	18.02
CDX68380	Canola	cytosol	19.56	16.73
CDY48332	Canola	mitochondrion, plastid	25.27	16.34
CDX94661	Canola	plastid	25.49	16.32
CDX90186	Canola	mitochondrion	25.49	16.27
CDY38931	Canola	cytosol	21.98	16.26
CDY43332	Canola	mitochondrion	25.27	15.99
CDX99816	Canola	plastid	25.05	15.75
CDY43686	Canola	plastid	22.86	15.73
CDY37666	Canola	cytosol, plastid	22.86	15.73
CDY46092	Canola	endoplasmic reticulum, golgi, plasma membrane, plastid	34.95	15.39
CDX73439	Canola	plastid	29.67	14.98
CDX71307	Canola	cytosol	21.76	14.71
CDY31406	Canola	cytosol	21.76	14.69
CDX70810	Canola	cytosol	14.51	13.98
CDY51235	Canola	extracellular, golgi	14.95	13.1
CDY54132	Canola	cytosol	19.12	12.79
CDY24520	Canola	cytosol	18.9	12.76
CDY04747	Canola	cytosol, golgi	12.09	12.47
CDX93411	Canola	mitochondrion	17.58	11.46
CDY55050	Canola	cytosol	17.36	11.35
CDX70805	Canola	cytosol	16.26	4.8
CDY51234	Canola	cytosol	15.38	4.22
CDY04344	Canola	cytosol	1.76	2.51
CDY04342	Canola	cytosol	1.54	2.1

Protein Annotations

Gene3D:1.25.10.10	MapMan:35.1	InterPro:ARM-like	InterPro:ARM-type_fold	InterPro:Armadillo	EnsemblPlants:CDX90518
ProteinID:CDX90518	ProteinID:CDX90518.1	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	EnsemblPlantsGene:GSBRNA2T00151144001
InterPro:IPR000225	InterPro:IPR011989	PFAM:PF00514	PFscan:PS50176	PANTHER:PTHR23315	PANTHER:PTHR23315:SF129
SMART:SM00185	SUPFAM:SSF48371	UniParc:UPI0004EDEBA4	SEG:seg	:	:

Description

BnaA03g42630D

Coordinates

chrLK031863:+:675203..677009

Molecular Weight (calculated)

48480.0 Da

IEP (calculated)

5.783

GRAVY (calculated)

-0.074

Length

455 amino acids

Sequence
(BLAST)

001: MVSVEDPLSH SNLTRFQSTT NFYGSPSSPS TERIHRQAGR SMRTVRSSFY QSGDQSCSFV GDEFLSDSVV DIRLGELASK NTNSSPHSKA SSVIDEVFLD
101: ISQAFSDFSA CSSDISGELH RLACLPSPDV NENVGMQDPE PCLGFLERES FSTEIIECIS PEDLQPTVKL CVDGLRSSSV AIKRSAAAKL RLLAKNREDN
201: RLLIGESGAI QALIPLLRCN DPLTQEHAVT ALLNLSLHDQ NKSVIVAGGA IKPLVWVLKT GTETSKQNAA CALLSLALVE ENKNSIGACG AIPPLVSLIL
301: NGSCRGKKDA VTTLYKLCTL RQNKERAVAA GAVKPLVELV GEEGTGMAEK AMVVLSSLAG VEEGKEAIVE EGGIVALVEA IEDGSVKGKE FAVLTLLQLC
401: GESVRNRGLL VREGAIPPLV GLSQSGSVSV RAKRKAERLL GYLREPRKEG SSSSS

Best Arabidopsis Sequence Match ( AT4G16490.1 )
(BLAST)

001: MVSVEEPLSH SNSTRFPLTT DFYGSSSPSA ARLHRQAGRS MRTVRSNFYQ SGDQSCSFVG SIGDKSEYAS EFLSDSVIDM RLGELALKNS NSLNSNASSM
101: KEEAFLDISQ AFSDFSACSS DISGELQRLA CLPSPEADRN ESGGDNEAEH DPELEREPCL GFLQRENFST EIIECISPED LQPTVKLCID GLRSSSVAIK
201: RSAAAKLRLL AKNRADNRVL IGESGAIQAL IPLLRCNDPW TQEHAVTALL NLSLHDQNKA VIAAGGAIKS LVWVLKTGTE TSKQNAACAL LSLALLEENK
301: GSIGACGAIP PLVSLLLNGS CRGKKDALTT LYKLCTLQQN KERAVTAGAV KPLVDLVAEE GTGMAEKAMV VLSSLAAIDD GKEAIVEEGG IAALVEAIED
401: GSVKGKEFAI LTLLQLCSDS VRNRGLLVRE GAIPPLVGLS QSGSVSVRAK RKAERLLGYL REPRKEASSS SP

Arabidopsis Description

ARM repeat superfamily protein [Source:UniProtKB/TrEMBL;Acc:F4JMH0]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.