Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra012155.1-P | Field mustard | cytosol | 99.7 | 99.7 |
| CDY12838 | Canola | cytosol | 93.02 | 87.7 |
| CDY18649 | Canola | cytosol, plastid | 69.35 | 64.19 |
| CDX81323 | Canola | cytosol, plastid | 69.65 | 63.49 |
| KRH17146 | Soybean | cytosol | 19.73 | 54.62 |
| TraesCS3B01G443200.1 | Wheat | cytosol, endoplasmic reticulum | 20.79 | 53.94 |
| GSMUA_Achr9P12570_001 | Banana | cytosol | 23.98 | 52.67 |
| GSMUA_Achr4P01530_001 | Banana | plasma membrane | 41.58 | 44.84 |
| CDX76873 | Canola | cytosol, plastid | 48.56 | 42.84 |
| CDY28679 | Canola | cytosol | 16.84 | 42.21 |
| Solyc01g014230.2.1 | Tomato | cytosol | 48.71 | 39.58 |
| TraesCS3A01G390200.1 | Wheat | cytosol | 26.1 | 39.18 |
| TraesCS3D01G382500.1 | Wheat | cytosol | 26.25 | 39.14 |
| Solyc12g100000.1.1 | Tomato | cytosol, plastid | 48.25 | 38.83 |
| TraesCS3B01G422200.1 | Wheat | cytosol | 25.95 | 38.69 |
| PGSC0003DMT400046295 | Potato | cytosol | 47.95 | 38.49 |
| HORVU3Hr1G081380.1 | Barley | cytosol | 25.64 | 38.24 |
| VIT_07s0129g00590.t01 | Wine grape | cytosol | 48.86 | 37.97 |
| KRH72794 | Soybean | plasma membrane | 46.13 | 37.39 |
| KRH30135 | Soybean | cytosol | 46.74 | 36.75 |
| KRG98177 | Soybean | cytosol | 46.74 | 36.62 |
| CDY32692 | Canola | peroxisome | 18.66 | 34.84 |
| CDX78262 | Canola | cytosol | 36.87 | 34.62 |
| CDY02828 | Canola | cytosol | 18.51 | 34.46 |
| CDX74298 | Canola | plastid | 18.36 | 34.18 |
| CDX73449 | Canola | cytosol | 36.42 | 34.09 |
| CDX91947 | Canola | plastid | 18.21 | 33.99 |
| CDY38931 | Canola | cytosol | 31.41 | 33.66 |
| Os08t0110500-01 | Rice | plasma membrane | 41.88 | 33.5 |
| PGSC0003DMT400027406 | Potato | cytosol | 13.51 | 33.33 |
| CDY02891 | Canola | cytosol | 37.18 | 33.24 |
| CDY64696 | Canola | cytosol, extracellular, mitochondrion, plastid | 36.72 | 32.79 |
| TraesCS3B01G591000.1 | Wheat | cytosol | 40.97 | 32.49 |
| TraesCS3D01G527900.1 | Wheat | cytosol | 40.67 | 32.25 |
| TraesCS3A01G521300.1 | Wheat | cytosol | 40.67 | 32.25 |
| HORVU3Hr1G113910.3 | Barley | cytosol | 40.97 | 32.22 |
| EES01872 | Sorghum | cytosol | 39.15 | 32.05 |
| CDX90518 | Canola | plastid | 21.55 | 31.21 |
| Zm00001d035040_P007 | Maize | mitochondrion | 41.12 | 31.08 |
| TraesCS3A01G410100.1 | Wheat | cytosol | 24.89 | 31.0 |
| Os01t0884400-01 | Rice | plasma membrane | 39.3 | 30.91 |
| TraesCS3B01G443500.1 | Wheat | cytosol | 24.73 | 30.81 |
| CDY46092 | Canola | endoplasmic reticulum, golgi, plasma membrane, plastid | 48.25 | 30.78 |
| CDY09688 | Canola | cytosol | 21.09 | 30.62 |
| Zm00001d049708_P007 | Maize | cytosol | 40.06 | 29.93 |
| CDX78273 | Canola | cytosol | 27.92 | 29.02 |
| CDY25764 | Canola | cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole | 25.64 | 28.74 |
| CDY12497 | Canola | cytosol | 25.64 | 28.31 |
| CDX99112 | Canola | cytosol | 27.92 | 28.09 |
| CDX68379 | Canola | cytosol | 27.92 | 27.96 |
| CDY21412 | Canola | cytosol, endoplasmic reticulum | 25.64 | 27.8 |
| Zm00001d042608_P002 | Maize | cytosol | 39.0 | 27.78 |
| CDY04746 | Canola | cytosol, endoplasmic reticulum | 25.64 | 27.75 |
| CDX86080 | Canola | cytosol | 27.62 | 27.74 |
| CDX96295 | Canola | cytosol, plasma membrane | 25.64 | 27.44 |
| CDY68352 | Canola | cytosol | 18.82 | 27.19 |
| EES14396 | Sorghum | cytosol | 41.27 | 27.01 |
| TraesCS3A01G410000.1 | Wheat | cytosol | 25.95 | 26.97 |
| CDX72769 | Canola | cytosol | 25.04 | 26.96 |
| CDX68380 | Canola | cytosol | 21.7 | 26.88 |
| CDY31736 | Canola | cytosol | 26.1 | 26.79 |
| CDX74050 | Canola | cytosol | 18.51 | 26.75 |
| CDY38506 | Canola | cytosol | 18.36 | 26.54 |
| CDX95193 | Canola | cytosol | 26.25 | 26.41 |
| CDY71737 | Canola | cytosol | 18.51 | 26.41 |
| CDY68037 | Canola | cytosol | 26.1 | 26.26 |
| CDY28059 | Canola | cytosol | 18.36 | 26.19 |
| CDY08002 | Canola | cytosol | 18.06 | 26.15 |
| CDX77213 | Canola | cytosol | 25.49 | 26.13 |
| CDY04747 | Canola | cytosol, golgi | 15.63 | 23.36 |
| CDX99816 | Canola | plastid | 25.64 | 23.34 |
| CDY48332 | Canola | mitochondrion, plastid | 24.89 | 23.3 |
| CDY43332 | Canola | mitochondrion | 25.19 | 23.09 |
| CDX90186 | Canola | mitochondrion | 24.89 | 23.0 |
| CDY43686 | Canola | plastid | 22.91 | 22.84 |
| CDY37666 | Canola | cytosol, plastid | 22.76 | 22.69 |
| CDX94661 | Canola | plastid | 23.82 | 22.08 |
| CDX70810 | Canola | cytosol | 15.33 | 21.4 |
| CDX71307 | Canola | cytosol | 21.85 | 21.4 |
| CDY31406 | Canola | cytosol | 21.85 | 21.36 |
| CDX73439 | Canola | plastid | 27.92 | 20.42 |
| CDY51235 | Canola | extracellular, golgi | 15.33 | 19.46 |
| CDY55050 | Canola | cytosol | 18.36 | 17.39 |
| CDX93411 | Canola | mitochondrion | 18.21 | 17.19 |
| CDY24520 | Canola | cytosol | 17.45 | 17.06 |
| CDY54132 | Canola | cytosol | 17.45 | 16.91 |
| CDY04344 | Canola | cytosol | 6.37 | 13.17 |
| CDY04342 | Canola | cytosol | 6.22 | 12.31 |
| CDX70805 | Canola | cytosol | 16.24 | 6.94 |
| CDY51234 | Canola | cytosol | 17.0 | 6.76 |
Protein Annotations
| Gene3D:1.25.10.10 | MapMan:19.2.2.1.5.2.1 | Gene3D:3.30.40.10 | GO:A0A078J452 | UniProt:A0A078J452 | InterPro:ARM-like |
| InterPro:ARM-type_fold | InterPro:Armadillo | EnsemblPlants:CDY57440 | ProteinID:CDY57440 | ProteinID:CDY57440.1 | ncoils:Coil |
| GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004842 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0006464 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009987 | GO:GO:0016567 | GO:GO:0016740 | GO:GO:0019538 |
| EnsemblPlantsGene:GSBRNA2T00022219001 | InterPro:IPR000225 | InterPro:IPR003613 | InterPro:IPR011989 | InterPro:IPR013083 | PFAM:PF00514 |
| PFAM:PF04564 | PFscan:PS50176 | PFscan:PS51698 | PANTHER:PTHR23315 | PANTHER:PTHR23315:SF7 | SMART:SM00185 |
| SMART:SM00504 | SUPFAM:SSF48371 | SUPFAM:SSF57850 | UniPathway:UPA00143 | UniParc:UPI0004EE78AE | InterPro:Ubox_domain |
| InterPro:Znf_RING/FYVE/PHD | SEG:seg | : | : | : | : |
Description
BnaAnng14540DRING-type E3 ubiquitin transferase [Source:UniProtKB/TrEMBL;Acc:A0A078J452]
Coordinates
chrLK033575:-:36914..39528
Molecular Weight (calculated)
72145.1 Da
IEP (calculated)
5.199
GRAVY (calculated)
-0.134
Length
659 amino acids
Sequence
(BLAST)
(BLAST)
001: MPLLDNPVVS DVSPSELLNN SFEELSQYVD ELREQFESWQ PLSSRILYVL RIESLASKMR ESSLEVFQLL KHLPADLVSP SEDCIELVKL VGREEVSYTI
101: DLALIDQRKG VELTPEVLVK IAESVGLRSN QDILIEGVVL TNLKEDANLV KDNTRAGFIK GLIYLTKQMH DYLAKIEQSQ SPSDFFCPLS LQLMTDPVTV
201: TSGQTYERAF IEKWFDMGLM VCPKTRQALS QTTLTPNFTV KAFIANWCES NNVNPPDPLE LIHSSQPFPL LVGSCSADDS RDSLPLPVMD DTLKCNHIES
301: VDASKCEELH QVLTRSASAP GIVSKVVSKA NTSISQAPGE TVPQPWIIPA TMKETGSSSN MEAEETGGSS SMEVEVKKLI QDLKSSSLDA QREATAQLRL
401: LTKDIPDDRT VIARCGAIAA LVNKLYSMDK MIQAEAVTCL LNLSLDDSNK TVIAYSGVFK PLVHVLKTGN MEAKENSTRA LVSLSKAEEN RTKMLQAGAI
501: EPLVRLMGNG SPRGKKDAAT ALTNLATRNR EKEMVIRGGG VRYLIQMMNP AAGTVERAVV VLANLANVPE AKIAIRDGGG IPLLVDVVEL GSPRGQENAA
601: AALCVLCMDS SRFCNIVIRE GAIPPLVALT RSGTTRAKEK AKSLLKYFEA LKQENQRRN
101: DLALIDQRKG VELTPEVLVK IAESVGLRSN QDILIEGVVL TNLKEDANLV KDNTRAGFIK GLIYLTKQMH DYLAKIEQSQ SPSDFFCPLS LQLMTDPVTV
201: TSGQTYERAF IEKWFDMGLM VCPKTRQALS QTTLTPNFTV KAFIANWCES NNVNPPDPLE LIHSSQPFPL LVGSCSADDS RDSLPLPVMD DTLKCNHIES
301: VDASKCEELH QVLTRSASAP GIVSKVVSKA NTSISQAPGE TVPQPWIIPA TMKETGSSSN MEAEETGGSS SMEVEVKKLI QDLKSSSLDA QREATAQLRL
401: LTKDIPDDRT VIARCGAIAA LVNKLYSMDK MIQAEAVTCL LNLSLDDSNK TVIAYSGVFK PLVHVLKTGN MEAKENSTRA LVSLSKAEEN RTKMLQAGAI
501: EPLVRLMGNG SPRGKKDAAT ALTNLATRNR EKEMVIRGGG VRYLIQMMNP AAGTVERAVV VLANLANVPE AKIAIRDGGG IPLLVDVVEL GSPRGQENAA
601: AALCVLCMDS SRFCNIVIRE GAIPPLVALT RSGTTRAKEK AKSLLKYFEA LKQENQRRN
001: MMVHMEVSWL RVLLDNISSY LSLSSMDDLS SNPAHKYYTR GEDIGKLIKP VLENLIDSDA APSELLNNGF EELAQYVDEL REQFQSWQPL STRIFYVLRI
101: ESLASKLRES SLEVFQLLKH CEQHLPADLI SPSFEECIEL VKLVARDEIS YTIDQALKDQ KKGVGPTSEV LVKIAESTGL RSNQEILVEG VVLTNMKEDA
201: ELTDNDTEAE YLDGLISLTT QMHEYLSDIK QAQLRCPVRV PSDFRCSLSL ELMTDPVIVA SGQTFERVFI QKWIDMGLMV CPKTRQALSH TTLTPNFIVR
301: AFLASWCETN NVYPPDPLEL IHSSEPFPLL VESVRASSSE NGHSESLDAE ELRQVFSRSA SAPGIVSEVV CKTKRNNNAA ADRSLTRSNT PWKFPEERHW
401: RHPGIIPATV RETGSSSSIE TEVKKLIDDL KSSSLDTQRE ATARIRILAR NSTDNRIVIA RCEAIPSLVS LLYSTDERIQ ADAVTCLLNL SINDNNKSLI
501: AESGAIVPLI HVLKTGYLEE AKANSAATLF SLSVIEEYKT EIGEAGAIEP LVDLLGSGSL SGKKDAATAL FNLSIHHENK TKVIEAGAVR YLVELMDPAF
601: GMVEKAVVVL ANLATVREGK IAIGEEGGIP VLVEVVELGS ARGKENATAA LLQLCTHSPK FCNNVIREGV IPPLVALTKS GTARGKEKAQ NLLKYFKAHR
701: QSNQRRG
101: ESLASKLRES SLEVFQLLKH CEQHLPADLI SPSFEECIEL VKLVARDEIS YTIDQALKDQ KKGVGPTSEV LVKIAESTGL RSNQEILVEG VVLTNMKEDA
201: ELTDNDTEAE YLDGLISLTT QMHEYLSDIK QAQLRCPVRV PSDFRCSLSL ELMTDPVIVA SGQTFERVFI QKWIDMGLMV CPKTRQALSH TTLTPNFIVR
301: AFLASWCETN NVYPPDPLEL IHSSEPFPLL VESVRASSSE NGHSESLDAE ELRQVFSRSA SAPGIVSEVV CKTKRNNNAA ADRSLTRSNT PWKFPEERHW
401: RHPGIIPATV RETGSSSSIE TEVKKLIDDL KSSSLDTQRE ATARIRILAR NSTDNRIVIA RCEAIPSLVS LLYSTDERIQ ADAVTCLLNL SINDNNKSLI
501: AESGAIVPLI HVLKTGYLEE AKANSAATLF SLSVIEEYKT EIGEAGAIEP LVDLLGSGSL SGKKDAATAL FNLSIHHENK TKVIEAGAVR YLVELMDPAF
601: GMVEKAVVVL ANLATVREGK IAIGEEGGIP VLVEVVELGS ARGKENATAA LLQLCTHSPK FCNNVIREGV IPPLVALTKS GTARGKEKAQ NLLKYFKAHR
701: QSNQRRG
Arabidopsis Description
PUB2U-box domain-containing protein 2 [Source:UniProtKB/Swiss-Prot;Acc:Q5XEZ8]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.