Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH17146 | Soybean | cytosol | 28.46 | 31.93 |
| GSMUA_Achr9P12570_001 | Banana | cytosol | 35.21 | 31.33 |
| TraesCS3B01G443200.1 | Wheat | cytosol, endoplasmic reticulum | 28.09 | 29.53 |
| TraesCS3A01G390200.1 | Wheat | cytosol | 44.94 | 27.33 |
| TraesCS3B01G422200.1 | Wheat | cytosol | 44.94 | 27.15 |
| PGSC0003DMT400046295 | Potato | cytosol | 83.15 | 27.04 |
| TraesCS3D01G382500.1 | Wheat | cytosol | 44.19 | 26.7 |
| HORVU3Hr1G081380.1 | Barley | cytosol | 43.45 | 26.24 |
| PGSC0003DMT400030161 | Potato | cytosol | 27.72 | 20.67 |
| PGSC0003DMT400027542 | Potato | cytosol | 26.22 | 19.66 |
| Bra032180.1-P | Field mustard | cytosol | 38.58 | 17.64 |
| TraesCS3B01G443500.1 | Wheat | cytosol | 34.08 | 17.2 |
| TraesCS3A01G410000.1 | Wheat | cytosol | 40.45 | 17.03 |
| TraesCS3A01G410100.1 | Wheat | cytosol | 32.96 | 16.64 |
| KRG98177 | Soybean | cytosol | 52.06 | 16.53 |
| KRH30135 | Soybean | cytosol | 51.69 | 16.47 |
| VIT_07s0129g00590.t01 | Wine grape | cytosol | 51.69 | 16.27 |
| CDY38931 | Canola | cytosol | 37.45 | 16.26 |
| GSMUA_Achr4P01530_001 | Banana | plasma membrane | 35.96 | 15.71 |
| CDX76873 | Canola | cytosol, plastid | 43.82 | 15.66 |
| Os08t0110500-01 | Rice | plasma membrane | 48.31 | 15.66 |
| AT2G23140.1 | Thale cress | cytosol | 48.31 | 15.56 |
| TraesCS3B01G591000.1 | Wheat | cytosol | 47.94 | 15.4 |
| HORVU3Hr1G113910.3 | Barley | cytosol | 48.31 | 15.39 |
| TraesCS3D01G527900.1 | Wheat | cytosol | 47.57 | 15.28 |
| TraesCS3A01G521300.1 | Wheat | cytosol | 47.19 | 15.16 |
| KRH72794 | Soybean | plasma membrane | 46.07 | 15.13 |
| PGSC0003DMT400060674 | Potato | plastid | 25.47 | 15.08 |
| PGSC0003DMT400034564 | Potato | nucleus, plastid | 25.84 | 15.07 |
| Zm00001d049708_P007 | Maize | cytosol | 48.31 | 14.63 |
| Zm00001d035040_P007 | Maize | mitochondrion | 47.57 | 14.56 |
| AT5G67340.1 | Thale cress | cytosol | 36.33 | 13.72 |
| CDX81323 | Canola | cytosol, plastid | 37.08 | 13.69 |
| CDY18649 | Canola | cytosol, plastid | 36.33 | 13.62 |
| CDY57440 | Canola | cytosol | 33.33 | 13.51 |
| Bra012155.1-P | Field mustard | cytosol | 33.33 | 13.51 |
| Bra037117.1-P | Field mustard | cytosol, plastid | 36.7 | 13.35 |
| EES14396 | Sorghum | cytosol | 48.31 | 12.81 |
| CDY12838 | Canola | cytosol | 33.33 | 12.73 |
| PGSC0003DMT400011486 | Potato | cytosol | 16.85 | 12.61 |
| PGSC0003DMT400026700 | Potato | cytosol | 35.96 | 12.34 |
| PGSC0003DMT400019235 | Potato | cytosol | 28.46 | 12.18 |
| Os01t0884400-01 | Rice | plasma membrane | 37.83 | 12.05 |
| EES01872 | Sorghum | cytosol | 36.33 | 12.05 |
| PGSC0003DMT400082693 | Potato | cytosol | 10.86 | 11.89 |
| PGSC0003DMT400016998 | Potato | cytosol | 19.48 | 11.58 |
| CDY46092 | Canola | endoplasmic reticulum, golgi, plasma membrane, plastid | 43.45 | 11.23 |
| PGSC0003DMT400001049 | Potato | cytosol | 27.72 | 11.14 |
| PGSC0003DMT400015349 | Potato | cytosol | 26.97 | 11.13 |
| PGSC0003DMT400078166 | Potato | cytosol | 27.34 | 11.04 |
| PGSC0003DMT400078473 | Potato | cytosol | 26.22 | 10.77 |
| Zm00001d042608_P002 | Maize | cytosol | 36.33 | 10.49 |
| PGSC0003DMT400039084 | Potato | cytosol | 17.23 | 10.38 |
| PGSC0003DMT400075612 | Potato | cytosol | 24.72 | 10.23 |
| PGSC0003DMT400077205 | Potato | cytosol | 25.84 | 10.16 |
| PGSC0003DMT400090858 | Potato | cytosol, mitochondrion | 17.23 | 10.11 |
| PGSC0003DMT400025648 | Potato | cytosol | 24.34 | 10.02 |
| PGSC0003DMT400095861 | Potato | cytosol, plasma membrane | 19.48 | 9.29 |
| PGSC0003DMT400073254 | Potato | cytosol | 23.6 | 8.7 |
| PGSC0003DMT400071349 | Potato | plastid | 20.22 | 7.8 |
| PGSC0003DMT400062931 | Potato | cytosol | 17.98 | 7.04 |
Protein Annotations
| Gene3D:1.25.10.10 | MapMan:35.1 | InterPro:ARM-like | InterPro:ARM-type_fold | InterPro:Armadillo | GO:GO:0003674 |
| GO:GO:0005488 | GO:GO:0005515 | InterPro:IPR000225 | InterPro:IPR011989 | UniProt:M1APN0 | PFAM:PF00514 |
| EnsemblPlantsGene:PGSC0003DMG400010570 | PGSC:PGSC0003DMG400010570 | EnsemblPlants:PGSC0003DMT400027406 | PFscan:PS50176 | PANTHER:PTHR23315 | PANTHER:PTHR23315:SF220 |
| SMART:SM00185 | SUPFAM:SSF48371 | UniParc:UPI00029595C0 | SEG:seg | : | : |
Description
Arm repeat-containing protein [Source:PGSC_GENE;Acc:PGSC0003DMG400010570]
Coordinates
chr4:-:48358904..48359707
Molecular Weight (calculated)
29321.9 Da
IEP (calculated)
5.976
GRAVY (calculated)
-0.350
Length
267 amino acids
Sequence
(BLAST)
(BLAST)
001: MPGLDVEKIS IKSSEERMGN SGETNSHSLI GHNRTTSASS TLSNSNFSPT IPGNGNIVFS RSADDVSESQ PAAPLSVLRK EMKFQSMLET RVQNQSILHR
101: PFQRFPIIVS SAVVERKADP LELEEQVRKL IQDLNSNSID VERDVTAELR LLAKHNMDNR VVIANCGSIN LLVNLLHSED MKVQENAVTT LLNLSINDYR
201: RCSIGNANAI EPLIQVLHTG SGEAKENSAA TLFSLSSIED CKMKIGRAGA FKPLVDLLEN ETPRGKE
101: PFQRFPIIVS SAVVERKADP LELEEQVRKL IQDLNSNSID VERDVTAELR LLAKHNMDNR VVIANCGSIN LLVNLLHSED MKVQENAVTT LLNLSINDYR
201: RCSIGNANAI EPLIQVLHTG SGEAKENSAA TLFSLSSIED CKMKIGRAGA FKPLVDLLEN ETPRGKE
001: MVEMEVLLRS ISSFLNLSSS KHIDLDPFEK YYKRVEELLR VLKPIADVVV TSDFVFDEKL GKAFEELTQD VDQSIDLFRS WQAFSSKVYF VLQIESLLPK
101: MRDTIVDTFQ FLMSSKNHLP DELSPASLEQ CLEKIKHLSY EEISSVIDGA LRDQRDGVGP SPEILVKIGE NTGLRSNQEI LIEAVALERQ KEMAEQSENN
201: AEVEFLDQLI VIVNRMHERL LLIKQTQTSS VAILADFFCP LSLEVMTDPV IVSSGQTYEK AFIKRWIDLG LKVCPKTRQT LTHTTLIPNY TVKALIANWC
301: ETNDVKLPDP NKSTSLNELS PLLSCTDSIP STGADVSARK VSNKSHDWDA SSSETGKPSF SSRATEREGA SPSRPASALG ASSPGISGNG YGLDARRGSL
401: NDFEDRSNDS RELRTDAPGR SSVSSTTRGS VENGQTSENH HHRSPSATST VSNEEFPRAD ANENSEESAH ATPYSSDASG EIRSGPLAAT TSAATRRDLS
501: DFSPKFMDRR TRGQFWRRPS ERLGSRIVSA PSNETRRDLS EVETQVKKLV EELKSSSLDT QRQATAELRL LAKHNMDNRI VIGNSGAIVL LVELLYSTDS
601: ATQENAVTAL LNLSINDNNK KAIADAGAIE PLIHVLENGS SEAKENSAAT LFSLSVIEEN KIKIGQSGAI GPLVDLLGNG TPRGKKDAAT ALFNLSIHQE
701: NKAMIVQSGA VRYLIDLMDP AAGMVDKAVA VLANLATIPE GRNAIGQEGG IPLLVEVVEL GSARGKENAA AALLQLSTNS GRFCNMVLQE GAVPPLVALS
801: QSGTPRAREK AQALLSYFRN QRHGNAGRG
101: MRDTIVDTFQ FLMSSKNHLP DELSPASLEQ CLEKIKHLSY EEISSVIDGA LRDQRDGVGP SPEILVKIGE NTGLRSNQEI LIEAVALERQ KEMAEQSENN
201: AEVEFLDQLI VIVNRMHERL LLIKQTQTSS VAILADFFCP LSLEVMTDPV IVSSGQTYEK AFIKRWIDLG LKVCPKTRQT LTHTTLIPNY TVKALIANWC
301: ETNDVKLPDP NKSTSLNELS PLLSCTDSIP STGADVSARK VSNKSHDWDA SSSETGKPSF SSRATEREGA SPSRPASALG ASSPGISGNG YGLDARRGSL
401: NDFEDRSNDS RELRTDAPGR SSVSSTTRGS VENGQTSENH HHRSPSATST VSNEEFPRAD ANENSEESAH ATPYSSDASG EIRSGPLAAT TSAATRRDLS
501: DFSPKFMDRR TRGQFWRRPS ERLGSRIVSA PSNETRRDLS EVETQVKKLV EELKSSSLDT QRQATAELRL LAKHNMDNRI VIGNSGAIVL LVELLYSTDS
601: ATQENAVTAL LNLSINDNNK KAIADAGAIE PLIHVLENGS SEAKENSAAT LFSLSVIEEN KIKIGQSGAI GPLVDLLGNG TPRGKKDAAT ALFNLSIHQE
701: NKAMIVQSGA VRYLIDLMDP AAGMVDKAVA VLANLATIPE GRNAIGQEGG IPLLVEVVEL GSARGKENAA AALLQLSTNS GRFCNMVLQE GAVPPLVALS
801: QSGTPRAREK AQALLSYFRN QRHGNAGRG
Arabidopsis Description
RING-type E3 ubiquitin transferase [Source:UniProtKB/TrEMBL;Acc:F4ILG6]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.