Factsheet for PGSC0003DMT400025648

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc04g082440.2.1	Tomato	cytosol	97.38	97.38
PGSC0003DMT400075612	Potato	cytosol	71.65	72.09
KRH00831	Soybean	cytosol	60.4	61.73
KRH40395	Soybean	cytosol	60.09	61.42
GSMUA_Achr4P05030_001	Banana	cytosol	47.3	58.59
GSMUA_Achr4P04900_001	Banana	cytosol	46.84	57.58
KRH33490	Soybean	cytosol	46.07	56.95
CDX95193	Canola	cytosol	57.16	56.64
CDY68037	Canola	cytosol	57.01	56.49
Bra027977.1-P	Field mustard	cytosol	56.55	56.29
VIT_18s0001g14180.t01	Wine grape	cytosol	59.17	56.14
AT5G42340.1	Thale cress	cytosol	56.7	55.76
Os08t0481200-01	Rice	cytosol	53.62	54.21
TraesCS7A01G549700.1	Wheat	cytosol	53.16	53.41
KXG20946	Sorghum	cytosol	52.7	53.19
Zm00001d014845_P001	Maize	cytosol	52.39	53.04
EES15482	Sorghum	cytosol	52.54	53.03
TraesCS7D01G536300.1	Wheat	cytosol	52.54	52.87
HORVU7Hr1G121810.1	Barley	cytosol	51.77	52.42
TraesCS7D01G289800.1	Wheat	cytosol	51.93	52.33
Zm00001d031263_P001	Maize	cytosol	51.93	52.25
HORVU7Hr1G061800.2	Barley	cytosol	51.62	52.02
TraesCS7B01G186600.1	Wheat	cytosol	51.46	51.86
TraesCS7A01G293900.1	Wheat	cytosol	51.46	51.86
TraesCS7B01G473200.1	Wheat	cytosol	52.85	50.89
Os06t0726900-00	Rice	cytosol	27.27	46.58
PGSC0003DMT400019235	Potato	cytosol	39.75	41.35
PGSC0003DMT400078166	Potato	cytosol	41.6	40.85
PGSC0003DMT400001049	Potato	cytosol	41.14	40.21
PGSC0003DMT400015349	Potato	cytosol	35.44	35.55
PGSC0003DMT400078473	Potato	cytosol	35.59	35.54
PGSC0003DMT400016998	Potato	cytosol	21.26	30.73
PGSC0003DMT400077205	Potato	cytosol	32.05	30.63
PGSC0003DMT400030161	Potato	cytosol	16.8	30.45
PGSC0003DMT400027542	Potato	cytosol	16.64	30.34
PGSC0003DMT400011486	Potato	cytosol	16.33	29.69
PGSC0003DMT400073254	Potato	cytosol	30.05	26.93
PGSC0003DMT400039084	Potato	cytosol	18.34	26.86
PGSC0003DMT400062931	Potato	cytosol	27.43	26.1
PGSC0003DMT400034564	Potato	nucleus, plastid	18.18	25.76
PGSC0003DMT400026700	Potato	cytosol	30.66	25.58
PGSC0003DMT400060674	Potato	plastid	17.57	25.28
PGSC0003DMT400071349	Potato	plastid	26.19	24.57
PGSC0003DMT400027406	Potato	cytosol	10.02	24.34
PGSC0003DMT400046295	Potato	cytosol	30.2	23.87
PGSC0003DMT400095861	Potato	cytosol, plasma membrane	20.34	23.57
PGSC0003DMT400090858	Potato	cytosol, mitochondrion	16.49	23.52
PGSC0003DMT400082693	Potato	cytosol	8.78	23.36

Protein Annotations

Gene3D:1.20.930.20	Gene3D:1.25.10.10	Gene3D:3.30.40.10	MapMan:35.1	InterPro:ARM-like	InterPro:ARM-type_fold
InterPro:Adaptor_Cbl_N_dom_sf	InterPro:Armadillo	GO:GO:0003674	GO:GO:0003824	GO:GO:0004842	GO:GO:0004871
GO:GO:0005488	GO:GO:0005515	GO:GO:0006464	GO:GO:0007154	GO:GO:0007165	GO:GO:0007166
GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016567	GO:GO:0016740	GO:GO:0019538
InterPro:IPR000225	InterPro:IPR003613	InterPro:IPR011989	InterPro:IPR013083	InterPro:IPR036537	UniProt:M1ALS7
PFAM:PF00514	PFAM:PF04564	EnsemblPlantsGene:PGSC0003DMG400009904	PGSC:PGSC0003DMG400009904	EnsemblPlants:PGSC0003DMT400025648	PFscan:PS50176
PFscan:PS51698	PANTHER:PTHR23315	PANTHER:PTHR23315:SF49	SMART:SM00185	SMART:SM00504	SUPFAM:SSF48371
SUPFAM:SSF57850	UniParc:UPI00029508FE	InterPro:Ubox_domain	InterPro:Znf_RING/FYVE/PHD	SEG:seg	:

Description

Spotted leaf protein [Source:PGSC_GENE;Acc:PGSC0003DMG400009904]

Coordinates

chr4:+:71610867..71613967

Molecular Weight (calculated)

73006.7 Da

IEP (calculated)

5.956

GRAVY (calculated)

-0.279

Length

649 amino acids

Sequence
(BLAST)

001: MVSAGEKDIE QGFKMDEEND QSNQITTPID KRDLVYELMG IIHIISSYAE FRRTQRKESR NLVRRMKLLL PLLEEIRDFE GKIPESGVQC LVKMKKAFHS
101: AKKLLKTCHC GSKLYLALES ESVIRRFHSV YEKLSQTLDG MPYEELGISD EEKEQVELMI IQFKRSKKRI DTQDMELAMD LMVSLSTEND RNADSASIER
201: LAKKLELHTV EDLKAEMISV KEVIKERRSH NAENTQRIVD LLDKLKKLAG MEETGPCDEP VMPKALEKST SIAIPNEFLC PITLQIMADP VIISTGQTYE
301: RESIQQWLDS NHHTCPKTGE TLTHLSLAPN FALRNLIEEW CLKNNFQLPA KEAPMNPESP SAGSDEKLLS LIKDLSFSHL EVQRKAVTKI RMLSKENPEK
401: RTLIANYGGI PPLVLLLSYP DSKIQEHAVT ALLNLSIDES NKKLISREDA IPEIIEILQN GSVGAKENSA AALFSLSMLD ENKVAIGSLN GIPPLIDLLK
501: NGTIRGRKDA ITALFNLCFN HANKSIAIQA GIVAPLLQLL EEKHLDMVDE TLSILLILAT HPEGRQVIGK LSFIETLVNL MKDGTPKNKE CSVAVLFELS
601: TYNSNLMLAA LQYGVYEYLV EIGKEGTDRG QRKAKSILQL MTKTEQIPY

Best Arabidopsis Sequence Match ( AT5G42340.1 )
(BLAST)

001: MVDVMDTDEE ATGDAENRDE EVTAEEPIHD EVVDAVEIHE EEVKEDDDDC EGLVSDIVSI VEFLDQINGY RRTQQKECFN LVRRLKILIP FLDEIRGFES
101: PSCKHFLNRL RKVFLAAKKL LETCSNGSKI YMALDGETMM TRFHSIYEKL NRVLVKAPFD ELMISGDAKD EIDSLCKQLK KAKRRTDTQD IELAVDMMVV
201: FSKTDPRNAD SAIIERLAKK LELQTIDDLK TETIAIQSLI QDKGGLNIET KQHIIELLNK FKKLQGLEAT DILYQPVINK AITKSTSLIL PHEFLCPITL
301: EIMLDPVIIA TGQTYEKESI QKWFDAGHKT CPKTRQELDH LSLAPNFALK NLIMQWCEKN NFKIPEKEVS PDSQNEQKDE VSLLVEALSS SQLEEQRRSV
401: KQMRLLAREN PENRVLIANA GAIPLLVQLL SYPDSGIQEN AVTTLLNLSI DEVNKKLISN EGAIPNIIEI LENGNREARE NSAAALFSLS MLDENKVTIG
501: LSNGIPPLVD LLQHGTLRGK KDALTALFNL SLNSANKGRA IDAGIVQPLL NLLKDKNLGM IDEALSILLL LASHPEGRQA IGQLSFIETL VEFIRQGTPK
601: NKECATSVLL ELGSNNSSFI LAALQFGVYE YLVEITTSGT NRAQRKANAL IQLISKSEQI

Arabidopsis Description

PUB15U-box domain-containing protein 15 [Source:UniProtKB/Swiss-Prot;Acc:Q681N2]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.