Factsheet for HORVU7Hr1G121810.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol
MultiLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS7D01G536300.1	Wheat	cytosol	90.02	89.46
TraesCS7A01G549700.1	Wheat	cytosol	89.7	89.01
TraesCS7B01G473200.1	Wheat	cytosol	89.86	85.46
Zm00001d014845_P001	Maize	cytosol	76.29	76.29
KXG20946	Sorghum	cytosol	76.44	76.21
HORVU7Hr1G061800.2	Barley	cytosol	68.8	68.48
GSMUA_Achr4P05030_001	Banana	cytosol	49.61	60.69
GSMUA_Achr4P04900_001	Banana	cytosol	49.92	60.61
Os06t0726900-00	Rice	cytosol	35.1	59.21
VIT_03s0038g03660.t01	Wine grape	cytosol	54.91	54.91
KRH40395	Soybean	cytosol	53.04	53.54
KRH00831	Soybean	cytosol	52.57	53.07
Solyc04g082440.2.1	Tomato	cytosol	52.42	51.77
PGSC0003DMT400025648	Potato	cytosol	52.42	51.77
Solyc12g094610.1.1	Tomato	cytosol	42.43	50.65
PGSC0003DMT400075612	Potato	cytosol	50.39	50.08
Bra027977.1-P	Field mustard	cytosol	50.7	49.85
CDY68037	Canola	cytosol	50.86	49.77
CDX95193	Canola	cytosol	50.7	49.62
VIT_18s0001g14180.t01	Wine grape	cytosol	52.42	49.12
AT5G42340.1	Thale cress	cytosol	50.08	48.64
KRH33490	Soybean	cytosol	39.31	48.0
HORVU7Hr1G000780.1	Barley	cytosol	36.97	40.17
HORVU5Hr1G021270.1	Barley	cytosol	37.6	35.34
HORVU5Hr1G021280.1	Barley	cytosol	37.6	35.03
HORVU4Hr1G059610.2	Barley	cytosol	38.85	32.25
HORVU7Hr1G038870.1	Barley	plastid	12.95	28.92
HORVU2Hr1G067610.6	Barley	cytosol	20.75	28.06
HORVU6Hr1G073280.1	Barley	cytosol	34.63	27.65
HORVU3Hr1G081380.1	Barley	cytosol	18.1	26.24
HORVU3Hr1G081300.1	Barley	plastid	26.52	24.71
HORVU1Hr1G069990.1	Barley	plastid	26.21	24.63
HORVU3Hr1G113910.3	Barley	cytosol	30.73	23.51
HORVU2Hr1G036080.15	Barley	plastid	15.76	22.05
HORVU5Hr1G059280.1	Barley	cytosol, plasma membrane	23.87	21.83
HORVU6Hr1G041430.8	Barley	mitochondrion	26.83	20.87

Protein Annotations

Gene3D:1.25.10.10	Gene3D:3.30.40.10	MapMan:35.1	UniProt:A0A287Y1Y5	InterPro:ARM-like	InterPro:ARM-type_fold
InterPro:Armadillo	ncoils:Coil	GO:GO:0003674	GO:GO:0003824	GO:GO:0004842	GO:GO:0005488
GO:GO:0005515	GO:GO:0006464	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016567
GO:GO:0016740	GO:GO:0019538	EnsemblPlantsGene:HORVU7Hr1G121810	EnsemblPlants:HORVU7Hr1G121810.1	InterPro:IPR000225	InterPro:IPR003613
InterPro:IPR011989	InterPro:IPR013083	PFAM:PF00514	PFAM:PF04564	PFscan:PS50176	PFscan:PS51698
PANTHER:PTHR23315	PANTHER:PTHR23315:SF49	SMART:SM00185	SMART:SM00504	SUPFAM:SSF48371	SUPFAM:SSF57850
UniParc:UPI000B47A6E6	InterPro:Ubox_domain	InterPro:Znf_RING/FYVE/PHD	SEG:seg	:	:

Description

RING-type E3 ubiquitin transferase [Source:UniProtKB/TrEMBL;Acc:A0A287Y1Y5]

Coordinates

chrchr7H:+:654539257..654541525

Molecular Weight (calculated)

68874.8 Da

IEP (calculated)

7.102

GRAVY (calculated)

-0.170

Length

641 amino acids

Sequence
(BLAST)

001: XXXXXXXXXX XXXXXXXXXX PDPPEPSGRH LSDVDLLDEL LATVGAARAF QEFRRSQRKE CFTLLRWLQL VLPLIEELRE ASPPRPLTDD AYRRLALLSR
101: AFQAARRLLR CCHDGSKIFL SLESEAVQGR FRAVYEKVNL ALDGMPYSDI GISDEVKEQV ELINAQLKRS KKRADTQDME LAMDFLVVLQ DKEDRSADRV
201: ILERLAKKLE LQSLADLRAE TMAIKKLINE RNGQQPESTE QIIELLNKLK DVAGIDEKNI LGEVHIPKYL EKCPSLMIPN DFLCPISLEI MTDPTYERRS
301: IQKWLDAGQR TCPKTQQPLA HLSLAPNFAL KNLILQWCEN NKVEIQTRAD EPPVEEVSKE VLIPSLVKDL SSPNLDVQRK AVKKIRSLSK ESPENRTLIT
401: DSGGIAALVG LLQYPDKKIQ DNTVTSLLNL SIDEANKVLI AKGNAIPLII EVLKNGSVEG QENSAAALFS LSMVDENKVV IGALGGVPPL VNLLKNGTIR
501: GKKDANTAIF NLLLNHQNKL RAIEAGIVPV LLKILDDAKL SMVDEALSIF LLLGSNSACR ATIGTESFVE TLVRIIKEGT PKNKECALSV ILELGSCNNA
601: LMVHALGFGL QEHLTEIAKS GTSRAQRKAN SLIQLARKCQ S

Best Arabidopsis Sequence Match ( AT5G42340.1 )
(BLAST)

001: MVDVMDTDEE ATGDAENRDE EVTAEEPIHD EVVDAVEIHE EEVKEDDDDC EGLVSDIVSI VEFLDQINGY RRTQQKECFN LVRRLKILIP FLDEIRGFES
101: PSCKHFLNRL RKVFLAAKKL LETCSNGSKI YMALDGETMM TRFHSIYEKL NRVLVKAPFD ELMISGDAKD EIDSLCKQLK KAKRRTDTQD IELAVDMMVV
201: FSKTDPRNAD SAIIERLAKK LELQTIDDLK TETIAIQSLI QDKGGLNIET KQHIIELLNK FKKLQGLEAT DILYQPVINK AITKSTSLIL PHEFLCPITL
301: EIMLDPVIIA TGQTYEKESI QKWFDAGHKT CPKTRQELDH LSLAPNFALK NLIMQWCEKN NFKIPEKEVS PDSQNEQKDE VSLLVEALSS SQLEEQRRSV
401: KQMRLLAREN PENRVLIANA GAIPLLVQLL SYPDSGIQEN AVTTLLNLSI DEVNKKLISN EGAIPNIIEI LENGNREARE NSAAALFSLS MLDENKVTIG
501: LSNGIPPLVD LLQHGTLRGK KDALTALFNL SLNSANKGRA IDAGIVQPLL NLLKDKNLGM IDEALSILLL LASHPEGRQA IGQLSFIETL VEFIRQGTPK
601: NKECATSVLL ELGSNNSSFI LAALQFGVYE YLVEITTSGT NRAQRKANAL IQLISKSEQI

Arabidopsis Description

PUB15U-box domain-containing protein 15 [Source:UniProtKB/Swiss-Prot;Acc:Q681N2]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.