Factsheet for HORVU3Hr1G081380.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3D01G382500.1	Wheat	cytosol	91.86	91.86
TraesCS3B01G422200.1	Wheat	cytosol	90.95	90.95
TraesCS3A01G390200.1	Wheat	cytosol	90.27	90.89
KRH17146	Soybean	cytosol	38.91	72.27
GSMUA_Achr9P12570_001	Banana	cytosol	48.87	72.0
HORVU3Hr1G113910.3	Barley	cytosol	83.94	44.27
PGSC0003DMT400027406	Potato	cytosol	26.24	43.45
Os08t0110500-01	Rice	plasma membrane	79.86	42.84
HORVU7Hr1G038870.1	Barley	plastid	26.47	40.77
GSMUA_Achr4P01530_001	Banana	plasma membrane	54.3	39.28
Zm00001d035040_P007	Maize	mitochondrion	76.92	38.99
Zm00001d049708_P007	Maize	cytosol	74.43	37.3
EES14396	Sorghum	cytosol	78.28	34.36
HORVU2Hr1G036080.15	Barley	plastid	34.84	33.62
CDX76873	Canola	cytosol, plastid	54.98	32.53
PGSC0003DMT400046295	Potato	cytosol	58.82	31.67
Solyc01g014230.2.1	Tomato	cytosol	57.69	31.44
Solyc12g100000.1.1	Tomato	cytosol, plastid	57.24	30.89
KRG98177	Soybean	cytosol	57.92	30.44
VIT_07s0129g00590.t01	Wine grape	cytosol	58.37	30.42
AT2G23140.1	Thale cress	cytosol	56.79	30.28
KRH30135	Soybean	cytosol	57.24	30.19
KRH72794	Soybean	plasma membrane	55.43	30.14
CDY18649	Canola	cytosol, plastid	45.25	28.09
CDX81323	Canola	cytosol, plastid	45.93	28.08
AT5G67340.1	Thale cress	cytosol	44.57	27.86
Bra037117.1-P	Field mustard	cytosol, plastid	45.7	27.52
Bra012155.1-P	Field mustard	cytosol	38.24	25.64
CDY57440	Canola	cytosol	38.24	25.64
CDY12838	Canola	cytosol	38.46	24.32
CDY46092	Canola	endoplasmic reticulum, golgi, plasma membrane, plastid	54.75	23.43
HORVU7Hr1G000780.1	Barley	cytosol	31.22	23.39
CDY38931	Canola	cytosol	29.41	21.14
Bra032180.1-P	Field mustard	cytosol	27.83	21.06
HORVU5Hr1G021270.1	Barley	cytosol	29.41	19.06
HORVU2Hr1G067610.6	Barley	cytosol	20.36	18.99
HORVU5Hr1G021280.1	Barley	cytosol	29.41	18.9
HORVU7Hr1G121810.1	Barley	cytosol	26.24	18.1
HORVU4Hr1G059610.2	Barley	cytosol	30.32	17.36
HORVU7Hr1G061800.2	Barley	cytosol	24.89	17.08
HORVU6Hr1G073280.1	Barley	cytosol	28.51	15.69
HORVU1Hr1G069990.1	Barley	plastid	23.3	15.1
HORVU3Hr1G081300.1	Barley	plastid	22.85	14.68
HORVU6Hr1G041430.8	Barley	mitochondrion	24.89	13.35
HORVU5Hr1G059280.1	Barley	cytosol, plasma membrane	20.14	12.7

Protein Annotations

EnsemblPlants:HORVU3Hr1G081380.1	EnsemblPlantsGene:HORVU3Hr1G081380	Gene3D:1.25.10.10	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515
InterPro:ARM-like	InterPro:ARM-type_fold	InterPro:Armadillo	InterPro:IPR000225	InterPro:IPR011989	PANTHER:PTHR23315
PANTHER:PTHR23315:SF220	PFAM:PF00514	PFscan:PS50176	ProteinID:AIU34701.1	SEG:seg	SMART:SM00185
SUPFAM:SSF48371	UniParc:UPI00015B847F	UniProt:M0XKH6	MapMan:35.1	:	:

Description

Arm1 [Source:UniProtKB/TrEMBL;Acc:M0XKH6]

Coordinates

chrchr3H:-:594730499..594734223

Molecular Weight (calculated)

47543.4 Da

IEP (calculated)

5.502

GRAVY (calculated)

-0.250

Length

442 amino acids

Sequence
(BLAST)

001: MQMALLARLS LASSEGRESS LEERHAGSDE QTSEQSTKEA FQASHFDSDS QVRLGRSSVN DNLPNTRQLD EECDINDGMI RVPGDRTNYS SDASGEVADR
101: GLSISSAPQR ENVILPRLGH VCMEGPFVQR QTSDKGFPRI ISSLSMDARD DFSAIENQVR ELINDLGSDS IEGQRSATSE IRLLAKHNME NRIAIANCGA
201: INLLVGLLHS PDAKIQENAV TALLNLSLSD INKIAIVNAD AIDPLIHVLE TGNPEAKENS AATLFSLSII EENRVRIGRS GAVKPLVDLL GNGSPRGKKD
301: AVTALFNLSI LHENKGRIVQ ADALKHLVEL MDPAAGMVDK AVAVLANLAT IPEGRTAIGQ ARGIPALVEV VELGSAKAKE NATAALLQLC TNSSRFCNIV
401: LQEDAVPPLV ALSQSGTPRA REKAQVLLSY FRSQRHGNSG RR

Best Arabidopsis Sequence Match ( AT2G23140.1 )
(BLAST)

001: MVEMEVLLRS ISSFLNLSSS KHIDLDPFEK YYKRVEELLR VLKPIADVVV TSDFVFDEKL GKAFEELTQD VDQSIDLFRS WQAFSSKVYF VLQIESLLPK
101: MRDTIVDTFQ FLMSSKNHLP DELSPASLEQ CLEKIKHLSY EEISSVIDGA LRDQRDGVGP SPEILVKIGE NTGLRSNQEI LIEAVALERQ KEMAEQSENN
201: AEVEFLDQLI VIVNRMHERL LLIKQTQTSS VAILADFFCP LSLEVMTDPV IVSSGQTYEK AFIKRWIDLG LKVCPKTRQT LTHTTLIPNY TVKALIANWC
301: ETNDVKLPDP NKSTSLNELS PLLSCTDSIP STGADVSARK VSNKSHDWDA SSSETGKPSF SSRATEREGA SPSRPASALG ASSPGISGNG YGLDARRGSL
401: NDFEDRSNDS RELRTDAPGR SSVSSTTRGS VENGQTSENH HHRSPSATST VSNEEFPRAD ANENSEESAH ATPYSSDASG EIRSGPLAAT TSAATRRDLS
501: DFSPKFMDRR TRGQFWRRPS ERLGSRIVSA PSNETRRDLS EVETQVKKLV EELKSSSLDT QRQATAELRL LAKHNMDNRI VIGNSGAIVL LVELLYSTDS
601: ATQENAVTAL LNLSINDNNK KAIADAGAIE PLIHVLENGS SEAKENSAAT LFSLSVIEEN KIKIGQSGAI GPLVDLLGNG TPRGKKDAAT ALFNLSIHQE
701: NKAMIVQSGA VRYLIDLMDP AAGMVDKAVA VLANLATIPE GRNAIGQEGG IPLLVEVVEL GSARGKENAA AALLQLSTNS GRFCNMVLQE GAVPPLVALS
801: QSGTPRAREK AQALLSYFRN QRHGNAGRG

Arabidopsis Description

RING-type E3 ubiquitin transferase [Source:UniProtKB/TrEMBL;Acc:F4ILG6]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.