Skip to main content
crop-pal logo
Thale cress
Search for another protein from :
Thale cress
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • nucleus 2
  • cytosol 3
  • extracellular 2
  • endoplasmic reticulum 2
  • vacuole 2
  • plasma membrane 2
  • golgi 2
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, nucleus, secretory
BaCelLo:nucleus
MultiLoc:cytosol
Plant-mPloc:nucleus
PProwler:secretory
TargetP:secretory
WoLF PSORT:cytosol
YLoc:cytosol
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY18649 Canola cytosol, plastid 79.63 79.07
CDX81323 Canola cytosol, plastid 80.06 78.28
Bra037117.1-P Field mustard cytosol, plastid 80.2 77.25
KRH17146 Soybean cytosol 22.35 66.39
TraesCS3B01G443200.1 Wheat cytosol, endoplasmic reticulum 22.63 62.99
GSMUA_Achr9P12570_001 Banana cytosol 25.04 59.0
GSMUA_Achr4P01530_001 Banana plasma membrane 44.41 51.39
AT2G23140.1 Thale cress cytosol 54.74 46.68
Solyc01g014230.2.1 Tomato cytosol 52.19 45.5
Solyc12g100000.1.1 Tomato cytosol, plastid 52.48 45.3
VIT_07s0129g00590.t01 Wine grape cytosol 54.31 45.28
PGSC0003DMT400046295 Potato cytosol 52.19 44.95
HORVU3Hr1G081380.1 Barley cytosol 27.86 44.57
TraesCS3B01G422200.1 Wheat cytosol 27.86 44.57
KRH72794 Soybean plasma membrane 51.2 44.53
KRH30135 Soybean cytosol 52.76 44.51
TraesCS3A01G390200.1 Wheat cytosol 27.58 44.42
KRG98177 Soybean cytosol 52.76 44.35
TraesCS3D01G382500.1 Wheat cytosol 27.58 44.12
AT3G01400.1 Thale cress cytosol 20.08 40.0
Os08t0110500-01 Rice plasma membrane 45.97 39.44
TraesCS3A01G521300.1 Wheat cytosol 45.26 38.51
TraesCS3D01G527900.1 Wheat cytosol 45.12 38.39
TraesCS3B01G591000.1 Wheat cytosol 44.98 38.27
HORVU3Hr1G113910.3 Barley cytosol 45.26 38.19
AT3G54790.1 Thale cress cytosol 40.88 38.03
EES01872 Sorghum cytosol 43.0 37.76
Os01t0884400-01 Rice plasma membrane 44.41 37.47
Zm00001d035040_P007 Maize mitochondrion 45.54 36.93
AT5G58680.1 Thale cress cytosol 18.53 36.69
PGSC0003DMT400027406 Potato cytosol 13.72 36.33
TraesCS3A01G410100.1 Wheat cytosol 26.59 35.54
TraesCS3B01G443500.1 Wheat cytosol 26.59 35.54
Zm00001d049708_P007 Maize cytosol 43.42 34.81
AT3G54850.1 Thale cress cytosol 29.84 33.39
Zm00001d042608_P002 Maize cytosol 42.72 32.65
AT3G07360.1 Thale cress cytosol 21.22 32.61
AT3G46510.1 Thale cress cytosol 30.41 32.58
AT4G16490.1 Thale cress plastid 21.5 32.2
TraesCS3A01G410000.1 Wheat cytosol 28.85 32.18
EES14396 Sorghum cytosol 45.69 32.08
AT2G28830.1 Thale cress endoplasmic reticulum 25.74 31.27
AT1G23030.1 Thale cress cytosol 26.73 30.88
AT5G18320.1 Thale cress cytosol 19.52 30.13
AT1G71020.1 Thale cress cytosol 26.45 29.78
AT5G42340.1 Thale cress cytosol 27.16 29.09
AT5G01830.1 Thale cress plastid 24.19 25.37
AT1G29340.1 Thale cress plastid 26.03 25.24
AT5G18330.1 Thale cress cytosol 15.7 24.94
AT5G18340.1 Thale cress nucleus 15.84 24.56
AT1G60190.1 Thale cress cytosol, plastid 19.52 20.12
AT1G10560.1 Thale cress cytosol 19.38 19.66
Protein Annotations
Gene3D:1.25.10.10MapMan:19.2.2.1.5.2.1Gene3D:3.30.40.10EntrezGene:836869ProteinID:AED98330.1EMBL:AK229487
ProteinID:ANM70639.1InterPro:ARM-likeInterPro:ARM-type_foldArrayExpress:AT5G67340EnsemblPlantsGene:AT5G67340RefSeq:AT5G67340
TAIR:AT5G67340RefSeq:AT5G67340-TAIR-GEnsemblPlants:AT5G67340.1TAIR:AT5G67340.1InterPro:ArmadilloProteinID:BAB09019.1
EMBL:BT015818EMBL:BT020206GO:GO:0003674GO:GO:0003824GO:GO:0004842GO:GO:0005488
GO:GO:0005515GO:GO:0005575GO:GO:0005622GO:GO:0005623GO:GO:0005634GO:GO:0005737
GO:GO:0006464GO:GO:0008150GO:GO:0008152GO:GO:0009987GO:GO:0016567GO:GO:0016740
GO:GO:0019538InterPro:IPR000225InterPro:IPR003613InterPro:IPR011989InterPro:IPR013083RefSeq:NP_001332230.1
RefSeq:NP_201535.3PFAM:PF00514PFAM:PF04564PO:PO:0000230PO:PO:0000293PO:PO:0001185
PO:PO:0007095PO:PO:0007103PO:PO:0007115PO:PO:0007123PO:PO:0007611PO:PO:0007616
PO:PO:0009005PO:PO:0009009PO:PO:0009025PO:PO:0009029PO:PO:0009030PO:PO:0009031
PO:PO:0009047PO:PO:0020030PO:PO:0020100PO:PO:0025022PFscan:PS50176PFscan:PS51698
PANTHER:PTHR23315PANTHER:PTHR23315:SF7UniProt:Q5XEZ8SMART:SM00185SMART:SM00504SUPFAM:SSF48371
SUPFAM:SSF57850UniParc:UPI000034F358InterPro:Ubox_domainInterPro:Znf_RING/FYVE/PHDSEG:seg:
Description
PUB2U-box domain-containing protein 2 [Source:UniProtKB/Swiss-Prot;Acc:Q5XEZ8]
Coordinates
chr5:+:26864395..26867847
Molecular Weight (calculated)
78124.5 Da
IEP (calculated)
5.170
GRAVY (calculated)
-0.156
Length
707 amino acids
Sequence
(BLAST)
001: MMVHMEVSWL RVLLDNISSY LSLSSMDDLS SNPAHKYYTR GEDIGKLIKP VLENLIDSDA APSELLNNGF EELAQYVDEL REQFQSWQPL STRIFYVLRI
101: ESLASKLRES SLEVFQLLKH CEQHLPADLI SPSFEECIEL VKLVARDEIS YTIDQALKDQ KKGVGPTSEV LVKIAESTGL RSNQEILVEG VVLTNMKEDA
201: ELTDNDTEAE YLDGLISLTT QMHEYLSDIK QAQLRCPVRV PSDFRCSLSL ELMTDPVIVA SGQTFERVFI QKWIDMGLMV CPKTRQALSH TTLTPNFIVR
301: AFLASWCETN NVYPPDPLEL IHSSEPFPLL VESVRASSSE NGHSESLDAE ELRQVFSRSA SAPGIVSEVV CKTKRNNNAA ADRSLTRSNT PWKFPEERHW
401: RHPGIIPATV RETGSSSSIE TEVKKLIDDL KSSSLDTQRE ATARIRILAR NSTDNRIVIA RCEAIPSLVS LLYSTDERIQ ADAVTCLLNL SINDNNKSLI
501: AESGAIVPLI HVLKTGYLEE AKANSAATLF SLSVIEEYKT EIGEAGAIEP LVDLLGSGSL SGKKDAATAL FNLSIHHENK TKVIEAGAVR YLVELMDPAF
601: GMVEKAVVVL ANLATVREGK IAIGEEGGIP VLVEVVELGS ARGKENATAA LLQLCTHSPK FCNNVIREGV IPPLVALTKS GTARGKEKAQ NLLKYFKAHR
701: QSNQRRG
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.