CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d042608_P002	Maize	cytosol	90.68	78.92
KRH17146	Soybean	cytosol	20.62	69.75
GSMUA_Achr9P12570_001	Banana	cytosol	25.22	67.67
Os01t0884400-01	Rice	plasma membrane	63.85	61.34
GSMUA_Achr4P01530_001	Banana	plasma membrane	45.84	60.39
Solyc01g014230.2.1	Tomato	cytosol	46.34	45.99
VIT_07s0129g00590.t01	Wine grape	cytosol	47.7	45.28
CDX76873	Canola	cytosol, plastid	41.99	45.25
Solyc12g100000.1.1	Tomato	cytosol, plastid	45.96	45.18
PGSC0003DMT400046295	Potato	cytosol	45.59	44.7
KRH30135	Soybean	cytosol	46.09	44.27
KRG98177	Soybean	cytosol	46.09	44.11
CDY18649	Canola	cytosol, plastid	38.51	43.54
CDX81323	Canola	cytosol, plastid	38.76	43.15
AT5G67340.1	Thale cress	cytosol	37.76	43.0
KRH72794	Soybean	plasma membrane	43.23	42.8
AT2G23140.1	Thale cress	cytosol	43.98	42.7
Bra037117.1-P	Field mustard	cytosol, plastid	38.88	42.64
EER97464	Sorghum	cytosol	18.63	41.44
CDY57440	Canola	cytosol	32.05	39.15
Bra012155.1-P	Field mustard	cytosol	31.8	38.85
CDY12838	Canola	cytosol	33.42	38.48
EES14396	Sorghum	cytosol	47.83	38.23
Bra032180.1-P	Field mustard	cytosol	27.33	37.67
CDY38931	Canola	cytosol	28.32	37.07
PGSC0003DMT400027406	Potato	cytosol	12.05	36.33
EER87680	Sorghum	cytosol	26.71	35.77
EER97453	Sorghum	plastid	20.25	34.83
CDY46092	Canola	endoplasmic reticulum, golgi, plasma membrane, plastid	42.24	32.91
EES15482	Sorghum	cytosol	24.72	30.95
EES06804	Sorghum	cytosol	17.52	30.39
OQU79384	Sorghum	cytosol	24.6	29.73
KXG20946	Sorghum	cytosol	23.35	29.24
EES07310	Sorghum	cytosol	22.86	28.84
OQU92820	Sorghum	cytosol	26.34	28.3
OQU78182	Sorghum	plastid	19.01	22.53
EES04812	Sorghum	plastid	20.37	22.5
OQU80426	Sorghum	endoplasmic reticulum, plasma membrane	19.38	21.85
KXG33626	Sorghum	plastid	18.26	20.94
KXG35540	Sorghum	plasma membrane	18.14	20.39

Protein Annotations

Gene3D:1.25.10.10	Gene3D:3.30.40.10	MapMan:35.1	EntrezGene:8061473	InterPro:ARM-like	InterPro:ARM-type_fold
InterPro:Armadillo	UniProt:C5XEM0	EnsemblPlants:EES01872	ProteinID:EES01872	ProteinID:EES01872.1	GO:GO:0003674
GO:GO:0003824	GO:GO:0004842	GO:GO:0005488	GO:GO:0005515	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005634	GO:GO:0005737	GO:GO:0006464	GO:GO:0008150	GO:GO:0008152
GO:GO:0009987	GO:GO:0016567	GO:GO:0016740	GO:GO:0019538	InterPro:IPR000225	InterPro:IPR003613
InterPro:IPR011989	InterPro:IPR013083	PFAM:PF00514	PFAM:PF04564	PFscan:PS50176	PFscan:PS51698
PANTHER:PTHR23315	PANTHER:PTHR23315:SF220	SMART:SM00185	SMART:SM00504	EnsemblPlantsGene:SORBI_3003G379800	SUPFAM:SSF48371
SUPFAM:SSF57850	unigene:Sbi.8850	UniParc:UPI0001A8501F	InterPro:Ubox_domain	RefSeq:XP_002456752.1	InterPro:Znf_RING/FYVE/PHD
SEG:seg	:	:	:	:	:

Description

hypothetical protein

Coordinates

chr3:+:69362960..69366951

Molecular Weight (calculated)

87940.1 Da

IEP (calculated)

5.382

GRAVY (calculated)

-0.155

Length

805 amino acids

Sequence
(BLAST)

001: MEESVPVSII SSISNFRTLS TSSVVETELV KRYCRKIDEI LGLLKLVLDE VLPQITLDDR KILLLEELDA TINDAIKLVG SWDLMMSKIY FVMQVESLIT
101: KMQNYVLEVC QVVNSEVTPP ETNCVSVYLE KIKQFQCEKI MGIIKEASRD LVKKFMPKSE TLTNIQVSLS LSTNQELLME AVALAKIRTR VSAEDSSELD
201: GINHISELVN HMLEKHVEEK QMHSINGVPI PADFCCPLSL ELMSDPVIVA TGQTYERVFI RKWLDLGYNV CPKTRQTLGH SNLIPNYTVK QLIENWSEIH
301: GVVLPDPVKL LSLSFSVSLK PINGRTSDKS PSSENSPRTN KFGSPDHMIS SDDSCHPNLL HENSDSDDQI SKASSSEDTD DSETDSSKLL IAATEANKLI
401: ICNATTDGSE ALVQSRKDGF HASDVEQHLQ SNGISSDIGS SASSSSNHLE VVEKNKEEQV SSNSIASETT RNGPTATFSK PNWLPRLGGV RSRNHLVWQQ
501: QSDKAVPMDS RSDFASADNK VCKLIEDLKN ECTDLQRAAI GELLVLSRHS MENRIAIANC GAIPFLVNLL YSADPSMQEN AVTVLLNLSL DDNNKITIAS
601: ADAIKPLIHV LETGNPEARA NSAATLFSLS VNEDNKARIG RSGAIKPLVD LLQDGSAQGK KDAATALFNL SIFHENKARI VEAGAVKHLV ELMDPAAGMV
701: DKAVAVLAIL ATVQEGRSGI AQAGGIPVLV EVVELGSARA KEHAAAALLQ LCTNNSRFCS LVLQEGAMPP LVALSQSGTA RAREKAQVLL SYFRNQRQVG
801: KVVRR

Best Arabidopsis Sequence Match ( AT2G23140.1 )
(BLAST)

001: MVEMEVLLRS ISSFLNLSSS KHIDLDPFEK YYKRVEELLR VLKPIADVVV TSDFVFDEKL GKAFEELTQD VDQSIDLFRS WQAFSSKVYF VLQIESLLPK
101: MRDTIVDTFQ FLMSSKNHLP DELSPASLEQ CLEKIKHLSY EEISSVIDGA LRDQRDGVGP SPEILVKIGE NTGLRSNQEI LIEAVALERQ KEMAEQSENN
201: AEVEFLDQLI VIVNRMHERL LLIKQTQTSS VAILADFFCP LSLEVMTDPV IVSSGQTYEK AFIKRWIDLG LKVCPKTRQT LTHTTLIPNY TVKALIANWC
301: ETNDVKLPDP NKSTSLNELS PLLSCTDSIP STGADVSARK VSNKSHDWDA SSSETGKPSF SSRATEREGA SPSRPASALG ASSPGISGNG YGLDARRGSL
401: NDFEDRSNDS RELRTDAPGR SSVSSTTRGS VENGQTSENH HHRSPSATST VSNEEFPRAD ANENSEESAH ATPYSSDASG EIRSGPLAAT TSAATRRDLS
501: DFSPKFMDRR TRGQFWRRPS ERLGSRIVSA PSNETRRDLS EVETQVKKLV EELKSSSLDT QRQATAELRL LAKHNMDNRI VIGNSGAIVL LVELLYSTDS
601: ATQENAVTAL LNLSINDNNK KAIADAGAIE PLIHVLENGS SEAKENSAAT LFSLSVIEEN KIKIGQSGAI GPLVDLLGNG TPRGKKDAAT ALFNLSIHQE
701: NKAMIVQSGA VRYLIDLMDP AAGMVDKAVA VLANLATIPE GRNAIGQEGG IPLLVEVVEL GSARGKENAA AALLQLSTNS GRFCNMVLQE GAVPPLVALS
801: QSGTPRAREK AQALLSYFRN QRHGNAGRG

Arabidopsis Description

RING-type E3 ubiquitin transferase [Source:UniProtKB/TrEMBL;Acc:F4ILG6]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.