CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

plastid 3
cytosol 1
mitochondrion 1
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 2
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	cytosol, mitochondrion, plastid, secretory
BaCelLo:	plastid
iPSORT:	plastid
MultiLoc:	cytosol
Predotar:	secretory
PProwler:	mitochondrion
WoLF PSORT:	plasma membrane
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d020332_P001	Maize	cytosol	90.78	93.12
Os09t0378700-00	Rice	plasma membrane, plastid	75.14	75.56
HORVU5Hr1G059280.1	Barley	cytosol, plasma membrane	70.39	71.9
TraesCS5D01G204700.1	Wheat	cytosol, plasma membrane	70.25	71.75
TraesCS5A01G198800.1	Wheat	cytosol, plasma membrane	70.25	71.75
TraesCS5B01G197400.1	Wheat	cytosol, plasma membrane, plastid	69.69	71.18
OQU80426	Sorghum	endoplasmic reticulum, plasma membrane	61.73	61.9
GSMUA_Achr9P14560_001	Banana	cytosol	37.29	45.64
VIT_17s0000g08080.t01	Wine grape	cytosol, mitochondrion	40.22	42.42
GSMUA_Achr3P06160_001	Banana	plastid	33.1	41.8
VIT_01s0026g00190.t01	Wine grape	cytosol	38.41	40.26
KRH03317	Soybean	cytosol, plastid	36.17	38.31
KRH69547	Soybean	cytosol, plastid	37.99	38.15
PGSC0003DMT400082693	Potato	cytosol	12.71	37.3
PGSC0003DMT400062931	Potato	cytosol	35.06	36.8
KRH54418	Soybean	cytosol, plastid	34.78	36.46
Solyc03g114160.1.1	Tomato	cytosol	34.64	36.36
AT1G60190.1	Thale cress	cytosol, plastid	34.64	36.15
PGSC0003DMT400095861	Potato	cytosol, plasma membrane	28.07	35.89
CDY24520	Canola	cytosol	33.52	35.61
AT1G10560.1	Thale cress	cytosol	34.64	35.58
Bra031521.1-P	Field mustard	cytosol	33.38	35.3
CDY55050	Canola	cytosol	34.08	35.06
CDX93411	Canola	mitochondrion	33.94	34.81
Bra019924.1-P	Field mustard	mitochondrion	33.66	34.68
CDY54132	Canola	cytosol	32.82	34.56
Solyc05g005670.1.1	Tomato	cytosol, mitochondrion	32.96	34.45
PGSC0003DMT400090858	Potato	cytosol, mitochondrion	21.79	34.29
CDY04344	Canola	cytosol	15.22	34.17
CDY04342	Canola	cytosol	15.22	32.73
OQU78182	Sorghum	plastid	25.84	27.25
KXG33626	Sorghum	plastid	26.68	27.21
EER87680	Sorghum	cytosol	22.77	27.12
EES04812	Sorghum	plastid	26.68	26.2
OQU79384	Sorghum	cytosol	23.74	25.53
EES07310	Sorghum	cytosol	21.93	24.61
KXG20946	Sorghum	cytosol	21.65	24.11
EES15482	Sorghum	cytosol	21.51	23.95
OQU92820	Sorghum	cytosol	24.86	23.77
EER97453	Sorghum	plastid	15.22	23.29
EER97464	Sorghum	cytosol	11.73	23.2
EES06804	Sorghum	cytosol	14.53	22.41
EES01872	Sorghum	cytosol	20.39	18.14
EES14396	Sorghum	cytosol	20.11	14.3

Protein Annotations

Gene3D:1.25.10.10	MapMan:19.2.2.1.5.2.1	Gene3D:3.30.40.10	UniProt:A0A1B6QCA8	InterPro:ARM-like	InterPro:ARM-type_fold
InterPro:Armadillo	GO:GO:0003674	GO:GO:0003824	GO:GO:0004842	GO:GO:0005488	GO:GO:0005515
GO:GO:0006464	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016567	GO:GO:0016740
GO:GO:0019538	InterPro:IPR000225	InterPro:IPR003613	InterPro:IPR011989	InterPro:IPR013083	EnsemblPlants:KXG35540
ProteinID:KXG35540	ProteinID:KXG35540.1	PFAM:PF00514	PFAM:PF04564	PFscan:PS50176	PFscan:PS51698
PANTHER:PTHR23315	PANTHER:PTHR23315:SF229	SMART:SM00185	SMART:SM00504	EnsemblPlantsGene:SORBI_3002G188700	SUPFAM:SSF48371
SUPFAM:SSF57850	UniParc:UPI00081ABEA5	InterPro:Ubox_domain	InterPro:Znf_RING/FYVE/PHD	SEG:seg	:

Description

hypothetical protein

Coordinates

chr2:+:57447925..57451045

Molecular Weight (calculated)

75509.0 Da

IEP (calculated)

7.774

GRAVY (calculated)

0.131

Length

716 amino acids

Sequence
(BLAST)

001: MPPPPPTGEP KRRRLLSLMA VYPSESIAPA PVFSSLLALA ADLSSQGFGA DAGAFPVLRR GLRQAVRIAG LLLAFLEEIQ DVTATKTAAL PSSAVLGLTE
101: LHVAMQKLRF LLSDCARRGA RLWVLVNAGL AASELRVILG SVAAAVDALP KEVVDASVEA GELARLMSEH AWRAAVRPDA GDERAARSVR SILEQFKSGV
201: SPDAEDVRRV LEHIGVRSWS DCSEEIAFLE DELRTRLDGG AGGDSSSSSS SSDAVLINSL MAFMVYCRVV LFDQIDANPK VDAASRPPAR CPDWLRPETL
301: QCPITLDLMT DPVTVSTGQT YDRESITRWI KAGCCTCPVT GERLRTADVV PNAALRGIIE RMLLSNGVSL PDRSISGHRH GALGDTAVAF GPAAAGAARL
401: AVAYTVAQIS TGSTAERRKA TCEARKLSKH SVFYRACLVE ANAVPWLLCL LSSTDASVQD NAVACLLNLS KHPRGRAALF EAGGVGLVVD VINVGARAEA
501: RQNAAAVLFY LSSNAEHAEE IGRIPEAIPT LVQLIRDGAH RGRKNAMVSL YGLLQCASNH GKAVAAGAVA ALGGLLLSVS VVDRDRDDDL ASDAVTLLAR
601: LAEQPAGAQA VLARPGLVAR VVEALATSAS RSGKDHCVAL LVSLCRHGGD KVVALLGRMP GLMSSLYTMV ADGGSPQTCK RARALLNLIH RHYEMDGQPA
701: SASAASEAGE RVVRVL

Best Arabidopsis Sequence Match ( AT1G60190.1 )
(BLAST)

001: MIHTPTGSSR RILTFPAVNP CESISLTTLV DSLLQLAGEI LSFKPKHFST NKRSVKETLR HVQTLVIFFE ELRIQIRVGS IPAGRSVILS LSELHVIFQK
101: LKFLLDDCTR DGAKLYMLMN SGQVSAHFRD LTRSISTSLD TFPVRSVDLP GEVNELIYLV MRQTRKSEAR PDRDDKRAID SVYWFFNLFE NRINPNSDEI
201: LRVLDHIGVR KWRDCVKEID FLREEISVGK KSNIEIELLS NLMGFICYCR CVILRGIDVD DEEKDKEEDD LMMVRSLNVD DLRCPISLEI MSDPVVLESG
301: HTYDRSSITK WFASGNITCP KTGKTLVSTV LVDNFSVKQV IQSYSKQNGV VMGQKGKKKV DVAESLAAEE AGKLTAEFLA GELIKGDEEE MVKALVEIRI
401: LTKTSTFYRS CLVEAGVVES LMKILRSDDP RIQENAMAGI MNLSKDIAGK TRIVGEDGGG LRLIVEVLND GARRESRQYA AAALFYLSSL GDYSRLIGEI
501: SDAIPGLVRI VKSCDYGDSA KRNALIAIRS LLMNQPDNHW RILAAGIVPV LLDLVKSEEI SDGVTADSMA ILAKMAEYPD GMISVLRRGG LKLAVKILGS
601: SEVSPATKQH CVALLLNLCH NGGSDVVGSL AKNPSIMGSL YTASSNGELG GGKKASALIK MIHEFQERKT GPGEPVLERE RFVHAW

Arabidopsis Description

PUB19U-box domain-containing protein 19 [Source:UniProtKB/Swiss-Prot;Acc:O80742]
SUBAcon: [plastid,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.