Factsheet for Bra031521.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 2
mitochondrion 3
cytosol 2
nucleus 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY24520	Canola	cytosol	98.52	98.96
AT1G60190.1	Thale cress	cytosol, plastid	78.29	77.26
Bra019924.1-P	Field mustard	mitochondrion	61.6	60.0
VIT_01s0026g00190.t01	Wine grape	cytosol	44.31	43.92
KRH69547	Soybean	cytosol, plastid	43.72	41.51
PGSC0003DMT400082693	Potato	cytosol	14.92	41.39
Solyc05g005670.1.1	Tomato	cytosol, mitochondrion	41.21	40.73
PGSC0003DMT400090858	Potato	cytosol, mitochondrion	27.33	40.66
PGSC0003DMT400095861	Potato	cytosol, plasma membrane	33.38	40.36
GSMUA_Achr9P14560_001	Banana	cytosol	29.54	34.19
TraesCS2A01G475600.1	Wheat	cytosol, plasma membrane	34.86	34.15
TraesCS2B01G499300.1	Wheat	plasma membrane	34.56	33.96
Os09t0378700-00	Rice	plasma membrane, plastid	35.6	33.85
Zm00001d020332_P001	Maize	cytosol	34.86	33.81
TraesCS2D01G475600.1	Wheat	cytosol, plasma membrane	33.97	33.38
KXG35540	Sorghum	plasma membrane	35.3	33.38
HORVU5Hr1G059280.1	Barley	cytosol, plasma membrane	34.42	33.24
TraesCS5D01G204700.1	Wheat	cytosol, plasma membrane	34.42	33.24
TraesCS5B01G197400.1	Wheat	cytosol, plasma membrane, plastid	34.12	32.95
Zm00001d050308_P001	Maize	mitochondrion, plasma membrane	33.68	32.85
TraesCS5A01G198800.1	Wheat	cytosol, plasma membrane	33.68	32.52
OQU80426	Sorghum	endoplasmic reticulum, plasma membrane	33.83	32.07
GSMUA_Achr3P06160_001	Banana	plastid	26.59	31.75
Os08t0415600-00	Rice	cytosol	32.35	30.54
Bra040513.1-P	Field mustard	cytosol	10.78	27.76
Bra001998.1-P	Field mustard	cytosol	24.22	27.47
Bra021899.1-P	Field mustard	plastid	26.44	27.08
Bra019022.1-P	Field mustard	cytosol	26.88	27.0
Bra010834.1-P	Field mustard	mitochondrion	27.18	25.59
Bra032309.1-P	Field mustard	plastid	26.59	25.57
Bra001247.1-P	Field mustard	cytosol	16.69	24.78
Bra012355.1-P	Field mustard	plasma membrane	21.42	24.66
Bra024559.1-P	Field mustard	cytosol, plasma membrane	21.71	24.14
Bra016165.1-P	Field mustard	cytosol, plasma membrane	21.71	23.86
Bra033820.1-P	Field mustard	cytosol	23.19	23.86
Bra018212.1-P	Field mustard	cytosol	22.9	23.81
Bra027977.1-P	Field mustard	cytosol	22.45	23.31
Bra040374.1-P	Field mustard	cytosol	15.51	23.28
Bra035665.1-P	Field mustard	cytosol	22.16	23.01
Bra029642.1-P	Field mustard	cytosol	15.66	22.94
Bra007105.1-P	Field mustard	cytosol	21.12	22.56
Bra001006.1-P	Field mustard	plastid	11.52	22.03
Bra020360.1-P	Field mustard	cytosol	11.08	21.25
Bra012713.1-P	Field mustard	cytosol	12.85	19.12
Bra007097.1-P	Field mustard	cytosol	19.79	19.09
Bra032180.1-P	Field mustard	cytosol	16.25	18.84
Bra038470.1-P	Field mustard	plastid	13.0	18.8
Bra014787.1-P	Field mustard	cytosol	20.38	18.7
Bra037117.1-P	Field mustard	cytosol, plastid	20.09	18.53
Bra012155.1-P	Field mustard	cytosol	16.99	17.45
Bra006451.1-P	Field mustard	cytosol	11.96	17.34
Bra002153.1-P	Field mustard	cytosol	14.03	6.95
Bra006452.1-P	Field mustard	cytosol	12.41	5.06

Protein Annotations

Gene3D:1.25.10.10	MapMan:19.2.2.1.5.2.1	Gene3D:3.30.40.10	InterPro:ARM-like	InterPro:ARM-type_fold	InterPro:Armadillo
EnsemblPlantsGene:Bra031521	EnsemblPlants:Bra031521.1	EnsemblPlants:Bra031521.1-P	GO:GO:0003674	GO:GO:0003824	GO:GO:0004842
GO:GO:0005488	GO:GO:0005515	GO:GO:0006464	GO:GO:0007275	GO:GO:0008150	GO:GO:0008152
GO:GO:0009791	GO:GO:0009987	GO:GO:0010029	GO:GO:0016567	GO:GO:0016740	GO:GO:0019538
InterPro:IPR000225	InterPro:IPR003613	InterPro:IPR011989	InterPro:IPR013083	UniProt:M4ERU4	PFAM:PF00514
PFAM:PF04564	PFscan:PS50176	PFscan:PS51698	PANTHER:PTHR23315	PANTHER:PTHR23315:SF116	SMART:SM00185
SMART:SM00504	SUPFAM:SSF48371	SUPFAM:SSF57850	UniParc:UPI0002544C75	InterPro:Ubox_domain	InterPro:Znf_RING/FYVE/PHD
SEG:seg	:	:	:	:	:

Description

AT1G60190 (E=7e-274) | armadillo/beta-catenin repeat family protein / U-box domain-containing protein

Coordinates

chrA01:+:16753155..16755188

Molecular Weight (calculated)

74580.5 Da

IEP (calculated)

7.656

GRAVY (calculated)

-0.043

Length

677 amino acids

Sequence
(BLAST)

001: MILTQNRRIL TFTAVHPCES VSITTLIDSL IKIAGEILSF KSKHFSTNKR SVKETLRHVL SLLIVFQEIR VGLIPAGRSF PRSAILSLSE LHVIFQKLMF
101: LLEDCTREGG KLYMLTNSDQ ISAHFRVLTR SISTCLDTFP VGSIDLPEEV NELIYLLIRQ TRKYEARPDR DDKRALDSVY WIFNLFENRI NPNRDEVVRV
201: LDHVGVRKWS DCVKEIGFLG EEITVEGKDK NEIELLSSLI GFICYCRCVI LGGVDEDEDK EEEDDLVIRG LNVDDLRCPI SLEIMNDPVV LETGHTYDRS
301: SIAKWFSAGN ITCPKTGKNL VSTVLVGNVS VKQLIQSYFK QETDNKSKKK KKKKTSVPES LAAEEAGKLI SDFLAGELIN GGSKEMVKAL VEIRILTKTS
401: SFNRSRLVEA GVVESLMKLL RSGDPTIQEN AMAVIFNLSK DNAGKVRIGG DGGGLGMIVE VLNEGARRES RQHAAAAIFY LSSLGDYSRS IGEIPDSIPG
501: LLRIVNGCDY GDSAKRNALI AIRSLLIQHS DNRWRVLAAG AVSVLLDLVR SGEIGDGAKA DSIAVLAKIA EYPDGMISVL RRGGLKLAVK VLGSSEVSPV
601: TKQHCVLLLL NLCVNGGSDV VGALAKDPSV MGSLYTALSN GECGGGRKAS ALIKMIHEFQ ERKTETGLER ERFVHAW

Best Arabidopsis Sequence Match ( AT1G60190.1 )
(BLAST)

001: MIHTPTGSSR RILTFPAVNP CESISLTTLV DSLLQLAGEI LSFKPKHFST NKRSVKETLR HVQTLVIFFE ELRIQIRVGS IPAGRSVILS LSELHVIFQK
101: LKFLLDDCTR DGAKLYMLMN SGQVSAHFRD LTRSISTSLD TFPVRSVDLP GEVNELIYLV MRQTRKSEAR PDRDDKRAID SVYWFFNLFE NRINPNSDEI
201: LRVLDHIGVR KWRDCVKEID FLREEISVGK KSNIEIELLS NLMGFICYCR CVILRGIDVD DEEKDKEEDD LMMVRSLNVD DLRCPISLEI MSDPVVLESG
301: HTYDRSSITK WFASGNITCP KTGKTLVSTV LVDNFSVKQV IQSYSKQNGV VMGQKGKKKV DVAESLAAEE AGKLTAEFLA GELIKGDEEE MVKALVEIRI
401: LTKTSTFYRS CLVEAGVVES LMKILRSDDP RIQENAMAGI MNLSKDIAGK TRIVGEDGGG LRLIVEVLND GARRESRQYA AAALFYLSSL GDYSRLIGEI
501: SDAIPGLVRI VKSCDYGDSA KRNALIAIRS LLMNQPDNHW RILAAGIVPV LLDLVKSEEI SDGVTADSMA ILAKMAEYPD GMISVLRRGG LKLAVKILGS
601: SEVSPATKQH CVALLLNLCH NGGSDVVGSL AKNPSIMGSL YTASSNGELG GGKKASALIK MIHEFQERKT GPGEPVLERE RFVHAW

Arabidopsis Description

PUB19U-box domain-containing protein 19 [Source:UniProtKB/Swiss-Prot;Acc:O80742]
SUBAcon: [plastid,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.