Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane, cytosol
Predictor Summary:
Predictor Summary:
- plastid 2
- cytosol 2
- mitochondrion 1
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 2
- golgi 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS5D01G204700.1 | Wheat | cytosol, plasma membrane | 97.15 | 97.15 |
| TraesCS5B01G197400.1 | Wheat | cytosol, plasma membrane, plastid | 96.29 | 96.29 |
| HORVU5Hr1G059280.1 | Barley | cytosol, plasma membrane | 94.86 | 94.86 |
| Os09t0378700-00 | Rice | plasma membrane, plastid | 72.61 | 71.49 |
| Zm00001d020332_P001 | Maize | cytosol | 70.76 | 71.06 |
| KXG35540 | Sorghum | plasma membrane | 71.75 | 70.25 |
| TraesCS2A01G475600.1 | Wheat | cytosol, plasma membrane | 60.48 | 61.36 |
| GSMUA_Achr9P14560_001 | Banana | cytosol | 37.38 | 44.79 |
| GSMUA_Achr3P06160_001 | Banana | plastid | 33.95 | 41.98 |
| VIT_17s0000g08080.t01 | Wine grape | cytosol, mitochondrion | 38.66 | 39.91 |
| VIT_01s0026g00190.t01 | Wine grape | cytosol | 38.52 | 39.53 |
| PGSC0003DMT400082693 | Potato | cytosol | 13.41 | 38.52 |
| KRH03317 | Soybean | cytosol, plastid | 35.81 | 37.13 |
| PGSC0003DMT400095861 | Potato | cytosol, plasma membrane | 29.53 | 36.96 |
| PGSC0003DMT400062931 | Potato | cytosol | 35.66 | 36.66 |
| KRH69547 | Soybean | cytosol, plastid | 37.23 | 36.61 |
| KRH54418 | Soybean | cytosol, plastid | 35.24 | 36.16 |
| CDY55050 | Canola | cytosol | 35.66 | 35.92 |
| Solyc05g005670.1.1 | Tomato | cytosol, mitochondrion | 34.95 | 35.77 |
| Solyc03g114160.1.1 | Tomato | cytosol | 34.66 | 35.63 |
| AT1G60190.1 | Thale cress | cytosol, plastid | 34.52 | 35.28 |
| CDX93411 | Canola | mitochondrion | 35.09 | 35.24 |
| Bra019924.1-P | Field mustard | mitochondrion | 34.81 | 35.11 |
| PGSC0003DMT400090858 | Potato | cytosol, mitochondrion | 22.68 | 34.95 |
| AT1G10560.1 | Thale cress | cytosol | 34.52 | 34.72 |
| CDY24520 | Canola | cytosol | 32.67 | 33.98 |
| Bra031521.1-P | Field mustard | cytosol | 32.52 | 33.68 |
| CDY54132 | Canola | cytosol | 32.52 | 33.53 |
| CDY04344 | Canola | cytosol | 14.84 | 32.6 |
| CDY04342 | Canola | cytosol | 14.98 | 31.53 |
| TraesCS3A01G345800.1 | Wheat | plastid | 26.11 | 26.79 |
| TraesCS7A01G001900.1 | Wheat | cytosol | 20.11 | 26.6 |
| TraesCS1A01G300000.1 | Wheat | cytosol | 25.25 | 26.5 |
| TraesCS6A01G293600.1 | Wheat | cytosol | 23.54 | 25.74 |
| TraesCS7A01G293900.1 | Wheat | cytosol | 23.54 | 25.62 |
| TraesCS7A01G549700.1 | Wheat | cytosol | 22.68 | 24.61 |
| TraesCS4A01G498700.1 | Wheat | plastid | 21.97 | 24.33 |
| TraesCS4A01G097700.1 | Wheat | cytosol | 24.39 | 23.92 |
| TraesCS6A01G190700.1 | Wheat | plastid | 24.54 | 23.72 |
| TraesCS5A01G078400.1 | Wheat | cytosol | 23.11 | 23.68 |
| TraesCS2A01G190800.1 | Wheat | cytosol | 14.41 | 23.17 |
| TraesCS2A01G193000.1 | Wheat | cytosol | 11.84 | 22.99 |
| TraesCS2A01G276400.1 | Wheat | nucleus | 14.27 | 21.74 |
| TraesCS3A01G390200.1 | Wheat | cytosol | 12.41 | 19.82 |
| TraesCS3A01G410100.1 | Wheat | cytosol | 14.69 | 19.47 |
| TraesCS3A01G521300.1 | Wheat | cytosol | 20.11 | 16.97 |
| TraesCS3A01G410000.1 | Wheat | cytosol | 14.12 | 15.62 |
Protein Annotations
| Gene3D:1.25.10.10 | MapMan:19.2.2.1.5.2.1 | Gene3D:3.30.40.10 | InterPro:ARM-like | InterPro:ARM-type_fold | InterPro:Armadillo |
| GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004842 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0006464 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009987 | GO:GO:0016567 | GO:GO:0016740 | GO:GO:0019538 |
| InterPro:IPR000225 | InterPro:IPR003613 | InterPro:IPR011989 | InterPro:IPR013083 | PFAM:PF00514 | PFAM:PF04564 |
| PFscan:PS50176 | PFscan:PS51698 | PANTHER:PTHR23315 | PANTHER:PTHR23315:SF229 | SMART:SM00185 | SMART:SM00504 |
| SUPFAM:SSF48371 | SUPFAM:SSF57850 | EnsemblPlantsGene:TraesCS5A01G198800 | EnsemblPlants:TraesCS5A01G198800.1 | InterPro:Ubox_domain | InterPro:Znf_RING/FYVE/PHD |
| TIGR:cd16664 | SEG:seg | : | : | : | : |
Description
No Description!
Coordinates
chr5A:+:403701252..403703793
Molecular Weight (calculated)
74661.6 Da
IEP (calculated)
8.121
GRAVY (calculated)
0.160
Length
701 amino acids
Sequence
(BLAST)
(BLAST)
001: MPAPPPPRSQ PKRRRPLALP AVCPCEGIAP EPLLASLVSL TADVASRRAG EASAFPVLRR GTHQAVRLAG LLLAFLEEIQ DAAATLSHSA VVGLTELHVA
101: MQKMRFLLTD CARRGGRLWV LVNAELIASE LRLCLGSVAA AMDVLPTSIV GASVESGELG RLVSDQAWRA VVRPDAGDKL AVRSIRSIMD TFKMGVAPEA
201: DDVMRVLRRI RVESWFQCSE EIAFLDGELS ARFDAGDENS SAVVLLNNLM AFLVYCRVVL FDHIDSKQSD ATAARPATCP EWIRPEALQC PITLELMTDP
301: VTVSTGQTYD RASITRWMKA GCRTCPVTGE KLRTADLVPN AALCGIIERM LLSNGVSLPE TGSRHHHGDA DGSAATFSPS ATGAARLAIS YIVAQFSTGS
401: TEERRKATSE ARKLSKHSVF YRALFVEANA VPWLLCLLSC MDASVQDNAV ASLLNLSKHP GGRTALVEAG GIGLVVDIVN VGSKAETQQN AVAILFYLSS
501: NAEYAEEIGR FPEAIPTLVR LIKEGAHRGR KNAMVSLYGL LQSPSNHAKA VAAGAVVVLA GLLSSDRDGD LACDTVSLLA RIAEQPAGAQ AVLARAGLVA
601: RLVEFLAASA SRSGKDHCVG LLVMLCRHGG EKVVALLGRM PGLMGSLHSL VADGSPATCK KARSLISMIH RHYELTRPSS SPVPLPVPTP DAGDRFVRLV
701: L
101: MQKMRFLLTD CARRGGRLWV LVNAELIASE LRLCLGSVAA AMDVLPTSIV GASVESGELG RLVSDQAWRA VVRPDAGDKL AVRSIRSIMD TFKMGVAPEA
201: DDVMRVLRRI RVESWFQCSE EIAFLDGELS ARFDAGDENS SAVVLLNNLM AFLVYCRVVL FDHIDSKQSD ATAARPATCP EWIRPEALQC PITLELMTDP
301: VTVSTGQTYD RASITRWMKA GCRTCPVTGE KLRTADLVPN AALCGIIERM LLSNGVSLPE TGSRHHHGDA DGSAATFSPS ATGAARLAIS YIVAQFSTGS
401: TEERRKATSE ARKLSKHSVF YRALFVEANA VPWLLCLLSC MDASVQDNAV ASLLNLSKHP GGRTALVEAG GIGLVVDIVN VGSKAETQQN AVAILFYLSS
501: NAEYAEEIGR FPEAIPTLVR LIKEGAHRGR KNAMVSLYGL LQSPSNHAKA VAAGAVVVLA GLLSSDRDGD LACDTVSLLA RIAEQPAGAQ AVLARAGLVA
601: RLVEFLAASA SRSGKDHCVG LLVMLCRHGG EKVVALLGRM PGLMGSLHSL VADGSPATCK KARSLISMIH RHYELTRPSS SPVPLPVPTP DAGDRFVRLV
701: L
001: MIHTPTGSSR RILTFPAVNP CESISLTTLV DSLLQLAGEI LSFKPKHFST NKRSVKETLR HVQTLVIFFE ELRIQIRVGS IPAGRSVILS LSELHVIFQK
101: LKFLLDDCTR DGAKLYMLMN SGQVSAHFRD LTRSISTSLD TFPVRSVDLP GEVNELIYLV MRQTRKSEAR PDRDDKRAID SVYWFFNLFE NRINPNSDEI
201: LRVLDHIGVR KWRDCVKEID FLREEISVGK KSNIEIELLS NLMGFICYCR CVILRGIDVD DEEKDKEEDD LMMVRSLNVD DLRCPISLEI MSDPVVLESG
301: HTYDRSSITK WFASGNITCP KTGKTLVSTV LVDNFSVKQV IQSYSKQNGV VMGQKGKKKV DVAESLAAEE AGKLTAEFLA GELIKGDEEE MVKALVEIRI
401: LTKTSTFYRS CLVEAGVVES LMKILRSDDP RIQENAMAGI MNLSKDIAGK TRIVGEDGGG LRLIVEVLND GARRESRQYA AAALFYLSSL GDYSRLIGEI
501: SDAIPGLVRI VKSCDYGDSA KRNALIAIRS LLMNQPDNHW RILAAGIVPV LLDLVKSEEI SDGVTADSMA ILAKMAEYPD GMISVLRRGG LKLAVKILGS
601: SEVSPATKQH CVALLLNLCH NGGSDVVGSL AKNPSIMGSL YTASSNGELG GGKKASALIK MIHEFQERKT GPGEPVLERE RFVHAW
101: LKFLLDDCTR DGAKLYMLMN SGQVSAHFRD LTRSISTSLD TFPVRSVDLP GEVNELIYLV MRQTRKSEAR PDRDDKRAID SVYWFFNLFE NRINPNSDEI
201: LRVLDHIGVR KWRDCVKEID FLREEISVGK KSNIEIELLS NLMGFICYCR CVILRGIDVD DEEKDKEEDD LMMVRSLNVD DLRCPISLEI MSDPVVLESG
301: HTYDRSSITK WFASGNITCP KTGKTLVSTV LVDNFSVKQV IQSYSKQNGV VMGQKGKKKV DVAESLAAEE AGKLTAEFLA GELIKGDEEE MVKALVEIRI
401: LTKTSTFYRS CLVEAGVVES LMKILRSDDP RIQENAMAGI MNLSKDIAGK TRIVGEDGGG LRLIVEVLND GARRESRQYA AAALFYLSSL GDYSRLIGEI
501: SDAIPGLVRI VKSCDYGDSA KRNALIAIRS LLMNQPDNHW RILAAGIVPV LLDLVKSEEI SDGVTADSMA ILAKMAEYPD GMISVLRRGG LKLAVKILGS
601: SEVSPATKQH CVALLLNLCH NGGSDVVGSL AKNPSIMGSL YTASSNGELG GGKKASALIK MIHEFQERKT GPGEPVLERE RFVHAW
Arabidopsis Description
PUB19U-box domain-containing protein 19 [Source:UniProtKB/Swiss-Prot;Acc:O80742]
SUBAcon: [plastid,cytosol]
SUBAcon: [plastid,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.