Factsheet for TraesCS2A01G475600.1

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane, cytosol

Predictor Summary:

plastid 1
cytosol 2
mitochondrion 2
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 2
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, plasma membrane
Any Predictor:	cytosol, mitochondrion, secretory
iPSORT:	plastid
MultiLoc:	cytosol
Predotar:	secretory
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	plasma membrane
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2D01G475600.1	Wheat	cytosol, plasma membrane	96.38	96.66
TraesCS2B01G499300.1	Wheat	plasma membrane	95.37	95.65
OQU80426	Sorghum	endoplasmic reticulum, plasma membrane	70.91	68.63
Zm00001d050308_P001	Maize	mitochondrion, plasma membrane	68.74	68.44
Os08t0415600-00	Rice	cytosol	67.87	65.41
TraesCS5A01G198800.1	Wheat	cytosol, plasma membrane	61.36	60.48
GSMUA_Achr9P14560_001	Banana	cytosol	40.09	47.35
GSMUA_Achr3P06160_001	Banana	plastid	37.34	45.5
VIT_01s0026g00190.t01	Wine grape	cytosol	40.09	40.56
VIT_17s0000g08080.t01	Wine grape	cytosol, mitochondrion	39.36	40.06
KRH69547	Soybean	cytosol, plastid	40.81	39.55
KRH03317	Soybean	cytosol, plastid	38.49	39.35
PGSC0003DMT400082693	Potato	cytosol	13.89	39.34
PGSC0003DMT400062931	Potato	cytosol	37.77	38.27
Solyc03g114160.1.1	Tomato	cytosol	37.19	37.68
PGSC0003DMT400095861	Potato	cytosol, plasma membrane	30.54	37.68
CDY55050	Canola	cytosol	36.9	36.64
Bra019924.1-P	Field mustard	mitochondrion	36.76	36.55
CDX93411	Canola	mitochondrion	36.61	36.25
Solyc05g005670.1.1	Tomato	cytosol, mitochondrion	35.89	36.2
KRH54418	Soybean	cytosol, plastid	35.6	36.02
PGSC0003DMT400090858	Potato	cytosol, mitochondrion	23.44	35.6
AT1G10560.1	Thale cress	cytosol	35.75	35.44
AT1G60190.1	Thale cress	cytosol, plastid	35.17	35.42
CDY24520	Canola	cytosol	34.15	35.01
Bra031521.1-P	Field mustard	cytosol	34.15	34.86
CDY54132	Canola	cytosol	34.01	34.56
CDY04344	Canola	cytosol	15.63	33.86
CDY04342	Canola	cytosol	15.77	32.73
TraesCS7A01G001900.1	Wheat	cytosol	22.29	29.06
TraesCS1A01G300000.1	Wheat	cytosol	26.92	27.84
TraesCS3A01G345800.1	Wheat	plastid	27.35	27.67
TraesCS4A01G498700.1	Wheat	plastid	24.75	27.01
TraesCS5A01G078400.1	Wheat	cytosol	26.34	26.61
TraesCS6A01G293600.1	Wheat	cytosol	23.88	25.74
TraesCS6A01G190700.1	Wheat	plastid	26.19	24.97
TraesCS4A01G097700.1	Wheat	cytosol	25.76	24.9
TraesCS7A01G293900.1	Wheat	cytosol	22.14	23.76
TraesCS7A01G549700.1	Wheat	cytosol	22.0	23.53
TraesCS2A01G193000.1	Wheat	cytosol	11.87	22.71
TraesCS2A01G190800.1	Wheat	cytosol	14.18	22.48
TraesCS2A01G276400.1	Wheat	nucleus	14.47	21.74
TraesCS3A01G390200.1	Wheat	cytosol	13.75	21.64
TraesCS3A01G410100.1	Wheat	cytosol	14.76	19.28
TraesCS3A01G521300.1	Wheat	cytosol	22.43	18.65
TraesCS3A01G410000.1	Wheat	cytosol	14.91	16.25

Protein Annotations

Gene3D:1.25.10.10	MapMan:19.2.2.1.5.2.1	Gene3D:3.30.40.10	InterPro:ARM-like	InterPro:ARM-type_fold	InterPro:Armadillo
GO:GO:0003674	GO:GO:0003824	GO:GO:0004842	GO:GO:0005488	GO:GO:0005515	GO:GO:0006464
GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016567	GO:GO:0016740	GO:GO:0019538
InterPro:IPR000225	InterPro:IPR003613	InterPro:IPR011989	InterPro:IPR013083	PFAM:PF00514	PFAM:PF04564
PFscan:PS50176	PFscan:PS51698	PANTHER:PTHR23315	PANTHER:PTHR23315:SF229	SMART:SM00185	SMART:SM00504
SUPFAM:SSF48371	SUPFAM:SSF57850	EnsemblPlantsGene:TraesCS2A01G475600	EnsemblPlants:TraesCS2A01G475600.1	InterPro:Ubox_domain	InterPro:Znf_RING/FYVE/PHD
TIGR:cd16664	SEG:seg	:	:	:	:

Description

No Description!

Coordinates

chr2A:+:715987180..715989255

Molecular Weight (calculated)

73537.3 Da

IEP (calculated)

7.759

GRAVY (calculated)

0.167

Length

691 amino acids

Sequence
(BLAST)

001: MPPHDRRAPP GRRMLALPTV CPCEAIAPGT LLASLVALVA EVARHDAAAL PVLRRGAGEA LRVTRVLLAF LEEVREAAAE PLPDASVLGL SELHVAMQKL
101: RFLLADCSRR GARLWVLMNA DLVASELRVV LCSVATALDV LPADVVGASV EAGELARLLS QQAWRAPVWP DEDDGRATRS VRSMLALFRS RATPHAEDAM
201: MVLGRVGITS WCDCAEEAAF LEAELLDRLE DGRENDNDLV LISGLMAFLV YCRVVLFDTV DAKKADAAAP GSRPASSCAA WTSQEALQCP ISLELMTDPV
301: TVTTGQTYDR TSIKRWIKSG CRTCPVTGEK LRSTQFVPNV AARGIVEQLL LANGTPLHEQ QSSKHRCAVD KTVSAFGPAA AGGVRLAVAF LIARLSRGTP
401: EEQKKATHEV RKLAKRNVYH RACLVEADAV PWLLHLVSSM DASVQDNAIA CLLNLSKHAA GRSALVEAGG LGLVVDAVNV AAKVEARQNA AAILFYLSPN
501: SEYCQEIGRI PEAIPTLVRL MRDGTYRGRK NALVSLHGVL HGASSIGKAV TAGAVGVLAS LLPGDREDLA NDAVALLARI AEQPAGATAI LASSELVTSL
601: VDFLGASASR SGKDHCVALL ASLCLHGGDK VVALMGKMTA LMPALYALIA DGSPLANKKA RWLINEIHRV YEQRQPPPPV APPAGDRVIR V

Best Arabidopsis Sequence Match ( AT1G60190.1 )
(BLAST)

001: MIHTPTGSSR RILTFPAVNP CESISLTTLV DSLLQLAGEI LSFKPKHFST NKRSVKETLR HVQTLVIFFE ELRIQIRVGS IPAGRSVILS LSELHVIFQK
101: LKFLLDDCTR DGAKLYMLMN SGQVSAHFRD LTRSISTSLD TFPVRSVDLP GEVNELIYLV MRQTRKSEAR PDRDDKRAID SVYWFFNLFE NRINPNSDEI
201: LRVLDHIGVR KWRDCVKEID FLREEISVGK KSNIEIELLS NLMGFICYCR CVILRGIDVD DEEKDKEEDD LMMVRSLNVD DLRCPISLEI MSDPVVLESG
301: HTYDRSSITK WFASGNITCP KTGKTLVSTV LVDNFSVKQV IQSYSKQNGV VMGQKGKKKV DVAESLAAEE AGKLTAEFLA GELIKGDEEE MVKALVEIRI
401: LTKTSTFYRS CLVEAGVVES LMKILRSDDP RIQENAMAGI MNLSKDIAGK TRIVGEDGGG LRLIVEVLND GARRESRQYA AAALFYLSSL GDYSRLIGEI
501: SDAIPGLVRI VKSCDYGDSA KRNALIAIRS LLMNQPDNHW RILAAGIVPV LLDLVKSEEI SDGVTADSMA ILAKMAEYPD GMISVLRRGG LKLAVKILGS
601: SEVSPATKQH CVALLLNLCH NGGSDVVGSL AKNPSIMGSL YTASSNGELG GGKKASALIK MIHEFQERKT GPGEPVLERE RFVHAW

Arabidopsis Description

PUB19U-box domain-containing protein 19 [Source:UniProtKB/Swiss-Prot;Acc:O80742]
SUBAcon: [plastid,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.