Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 2
- mitochondrion 2
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS2D01G197200.1 | Wheat | plastid | 98.62 | 93.68 |
| TraesCS2B01G216300.1 | Wheat | plastid | 97.94 | 93.23 |
| HORVU2Hr1G036080.15 | Barley | plastid | 97.25 | 92.58 |
| HORVU7Hr1G038870.1 | Barley | plastid | 56.19 | 85.37 |
| Os07t0584900-01 | Rice | plastid | 89.68 | 83.73 |
| Zm00001d021951_P001 | Maize | plastid | 88.99 | 83.44 |
| EER97453 | Sorghum | plastid | 89.22 | 83.12 |
| Zm00001d006705_P001 | Maize | plastid | 83.94 | 78.88 |
| GSMUA_Achr4P06990_001 | Banana | plastid | 65.37 | 70.72 |
| GSMUA_Achr4P11070_001 | Banana | cytosol | 63.99 | 66.11 |
| GSMUA_Achr3P29830_001 | Banana | cytosol | 61.01 | 63.94 |
| GSMUA_Achr1P22790_001 | Banana | mitochondrion | 63.53 | 61.15 |
| VIT_00s2269g00010.t01 | Wine grape | plastid | 55.05 | 53.1 |
| KRH51173 | Soybean | cytosol | 51.61 | 52.57 |
| KRH01984 | Soybean | cytosol | 51.15 | 52.47 |
| PGSC0003DMT400060674 | Potato | plastid | 53.67 | 51.88 |
| Solyc04g014810.2.1 | Tomato | plastid | 53.67 | 51.88 |
| Solyc11g012440.1.1 | Tomato | cytosol, plastid | 53.44 | 50.76 |
| PGSC0003DMT400034564 | Potato | nucleus, plastid | 52.98 | 50.44 |
| KRH36562 | Soybean | plastid | 52.75 | 50.22 |
| KRH11541 | Soybean | plastid | 52.06 | 49.67 |
| Bra012713.1-P | Field mustard | cytosol | 51.61 | 49.45 |
| CDX90518 | Canola | plastid | 51.61 | 49.45 |
| CDY09688 | Canola | cytosol | 51.15 | 49.12 |
| Bra038470.1-P | Field mustard | plastid | 51.83 | 48.29 |
| AT4G16490.1 | Thale cress | plastid | 51.15 | 47.25 |
| TraesCS2A01G193000.1 | Wheat | cytosol | 35.78 | 43.21 |
| TraesCS3A01G390200.1 | Wheat | cytosol | 35.32 | 35.08 |
| TraesCS3A01G410000.1 | Wheat | cytosol | 34.4 | 23.66 |
| TraesCS3A01G410100.1 | Wheat | cytosol | 28.67 | 23.63 |
| TraesCS7A01G001900.1 | Wheat | cytosol | 28.21 | 23.21 |
| TraesCS6A01G293600.1 | Wheat | cytosol | 30.05 | 20.44 |
| TraesCS3A01G521300.1 | Wheat | cytosol | 38.3 | 20.1 |
| TraesCS4A01G498700.1 | Wheat | plastid | 28.44 | 19.59 |
| TraesCS2A01G276400.1 | Wheat | nucleus | 19.04 | 18.04 |
| TraesCS5A01G078400.1 | Wheat | cytosol | 27.75 | 17.69 |
| TraesCS4A01G097700.1 | Wheat | cytosol | 28.9 | 17.62 |
| TraesCS7A01G293900.1 | Wheat | cytosol | 24.77 | 16.77 |
| TraesCS1A01G300000.1 | Wheat | cytosol | 24.77 | 16.17 |
| TraesCS3A01G345800.1 | Wheat | plastid | 24.54 | 15.67 |
| TraesCS7A01G549700.1 | Wheat | cytosol | 22.71 | 15.33 |
| TraesCS5A01G198800.1 | Wheat | cytosol, plasma membrane | 23.17 | 14.41 |
| TraesCS6A01G190700.1 | Wheat | plastid | 23.62 | 14.21 |
| TraesCS2A01G475600.1 | Wheat | cytosol, plasma membrane | 22.48 | 14.18 |
Protein Annotations
| EnsemblPlants:TraesCS2A01G190800.1 | EnsemblPlantsGene:TraesCS2A01G190800 | Gene3D:1.25.10.10 | Gene3D:1.25.10.110 | GO:GO:0003674 | GO:GO:0005488 |
| GO:GO:0005515 | InterPro:ARM-like | InterPro:ARM-type_fold | InterPro:Armadillo | InterPro:IPR000225 | InterPro:IPR011989 |
| PANTHER:PTHR23315 | PANTHER:PTHR23315:SF129 | PFAM:PF00514 | PFscan:PS50176 | SEG:seg | SMART:SM00185 |
| SUPFAM:SSF48371 | MapMan:35.1 | : | : | : | : |
Description
No Description!
Coordinates
chr2A:+:157534567..157536714
Molecular Weight (calculated)
44746.3 Da
IEP (calculated)
5.541
GRAVY (calculated)
0.057
Length
436 amino acids
Sequence
(BLAST)
(BLAST)
001: MRTIRSALLH PDSPPGPSSR PRAAAAADEG DSDIENLTDS VIDFRLSELA ATAGPAHPAA VAKSSSANAA ATEMLELSRD FSDYSSFNSD ISGELERLAA
101: AAATLRSDAP DLAAVDLNDL ESMDLSADAA PLDRVEPFVL ACVQALGPDA APDARRAAAA RIRLLAKHRS DIRELVGVSG AIPALVPLLR STDPVAQENA
201: VTALLNLSLE ERNRSAITAA GAIKPLVYAL RTGTASAKQN AACALLSLSG IEENRATIGA CGAIAPLVAL LSAGSTRGKK DALTTLYRLC SARRNKERAV
301: SAGAVVPLVH LIGERGTGTS EKAMVVLASL ASIAEGRDAV VEAGGIPALV ETIEDGPARE KEFAVVALLQ LCSECSSNCA LLVREGAIPP LVALSQSGSA
401: RAKHKSETLL GYLREQRQGG GGCRAGPGGA ATSMAR
101: AAATLRSDAP DLAAVDLNDL ESMDLSADAA PLDRVEPFVL ACVQALGPDA APDARRAAAA RIRLLAKHRS DIRELVGVSG AIPALVPLLR STDPVAQENA
201: VTALLNLSLE ERNRSAITAA GAIKPLVYAL RTGTASAKQN AACALLSLSG IEENRATIGA CGAIAPLVAL LSAGSTRGKK DALTTLYRLC SARRNKERAV
301: SAGAVVPLVH LIGERGTGTS EKAMVVLASL ASIAEGRDAV VEAGGIPALV ETIEDGPARE KEFAVVALLQ LCSECSSNCA LLVREGAIPP LVALSQSGSA
401: RAKHKSETLL GYLREQRQGG GGCRAGPGGA ATSMAR
001: MVSVEEPLSH SNSTRFPLTT DFYGSSSPSA ARLHRQAGRS MRTVRSNFYQ SGDQSCSFVG SIGDKSEYAS EFLSDSVIDM RLGELALKNS NSLNSNASSM
101: KEEAFLDISQ AFSDFSACSS DISGELQRLA CLPSPEADRN ESGGDNEAEH DPELEREPCL GFLQRENFST EIIECISPED LQPTVKLCID GLRSSSVAIK
201: RSAAAKLRLL AKNRADNRVL IGESGAIQAL IPLLRCNDPW TQEHAVTALL NLSLHDQNKA VIAAGGAIKS LVWVLKTGTE TSKQNAACAL LSLALLEENK
301: GSIGACGAIP PLVSLLLNGS CRGKKDALTT LYKLCTLQQN KERAVTAGAV KPLVDLVAEE GTGMAEKAMV VLSSLAAIDD GKEAIVEEGG IAALVEAIED
401: GSVKGKEFAI LTLLQLCSDS VRNRGLLVRE GAIPPLVGLS QSGSVSVRAK RKAERLLGYL REPRKEASSS SP
101: KEEAFLDISQ AFSDFSACSS DISGELQRLA CLPSPEADRN ESGGDNEAEH DPELEREPCL GFLQRENFST EIIECISPED LQPTVKLCID GLRSSSVAIK
201: RSAAAKLRLL AKNRADNRVL IGESGAIQAL IPLLRCNDPW TQEHAVTALL NLSLHDQNKA VIAAGGAIKS LVWVLKTGTE TSKQNAACAL LSLALLEENK
301: GSIGACGAIP PLVSLLLNGS CRGKKDALTT LYKLCTLQQN KERAVTAGAV KPLVDLVAEE GTGMAEKAMV VLSSLAAIDD GKEAIVEEGG IAALVEAIED
401: GSVKGKEFAI LTLLQLCSDS VRNRGLLVRE GAIPPLVGLS QSGSVSVRAK RKAERLLGYL REPRKEASSS SP
Arabidopsis Description
ARM repeat superfamily protein [Source:UniProtKB/TrEMBL;Acc:F4JMH0]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.