Factsheet for Solyc04g014810.2.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 7
cytosol 2
nucleus 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400060674	Potato	plastid	96.23	96.23
Solyc11g012440.1.1	Tomato	cytosol, plastid	82.26	80.83
VIT_00s2269g00010.t01	Wine grape	plastid	74.5	74.34
KRH36562	Soybean	plastid	72.51	71.4
KRH11541	Soybean	plastid	72.28	71.33
KRH51173	Soybean	cytosol	67.41	71.03
KRH01984	Soybean	cytosol	66.3	70.35
Bra012713.1-P	Field mustard	cytosol	68.74	68.13
CDY09688	Canola	cytosol	68.29	67.84
CDX90518	Canola	plastid	68.29	67.69
AT4G16490.1	Thale cress	plastid	70.07	66.95
Bra038470.1-P	Field mustard	plastid	68.96	66.45
GSMUA_Achr4P06990_001	Banana	plastid	53.22	59.55
HORVU7Hr1G038870.1	Barley	plastid	37.25	58.54
GSMUA_Achr3P29830_001	Banana	cytosol	51.88	56.25
GSMUA_Achr4P11070_001	Banana	cytosol	51.88	55.45
HORVU2Hr1G036080.15	Barley	plastid	55.21	54.37
TraesCS2D01G197200.1	Wheat	plastid	55.21	54.25
TraesCS2B01G216300.1	Wheat	plastid	54.99	54.15
Os07t0584900-01	Rice	plastid	55.88	53.96
GSMUA_Achr1P22790_001	Banana	mitochondrion	54.1	53.86
Zm00001d021951_P001	Maize	plastid	55.43	53.76
TraesCS2A01G190800.1	Wheat	cytosol	51.88	53.67
EER97453	Sorghum	plastid	55.65	53.63
Zm00001d006705_P001	Maize	plastid	53.88	52.37
Solyc12g088360.1.1	Tomato	cytosol	29.93	49.09
Solyc04g077850.2.1	Tomato	cytosol	34.81	44.1
Solyc06g051090.1.1	Tomato	cytosol	28.38	22.78
Solyc04g050780.1.1	Tomato	cytosol	20.84	21.81
Solyc09g056450.2.1	Tomato	cytosol	21.51	21.6
Solyc04g050770.1.1	Tomato	cytosol	21.06	21.44
Solyc12g094610.1.1	Tomato	cytosol	24.83	20.86
Solyc11g008390.1.1	Tomato	cytosol	28.82	20.83
Solyc11g066040.1.1	Tomato	cytosol	30.16	20.51
Solyc06g076040.2.1	Tomato	cytosol	29.71	20.27
Solyc01g014230.2.1	Tomato	cytosol	34.81	19.36
Solyc12g100000.1.1	Tomato	cytosol, plastid	35.03	19.29
Solyc09g025270.2.1	Tomato	cytosol	31.93	19.23
Solyc04g007640.2.1	Tomato	cytosol	26.83	18.7
Solyc05g008230.2.1	Tomato	cytosol	26.83	18.62
Solyc04g082440.2.1	Tomato	cytosol	25.5	17.72
Solyc02g072080.1.1	Tomato	cytosol, mitochondrion	24.61	15.33
Solyc03g114160.1.1	Tomato	cytosol	23.06	15.25
Solyc05g005670.1.1	Tomato	cytosol, mitochondrion	22.84	15.04
Solyc09g018230.1.1	Tomato	plastid	21.06	13.81

Protein Annotations

Gene3D:1.25.10.10	MapMan:35.1	InterPro:ARM-like	InterPro:ARM-type_fold	InterPro:Armadillo	GO:GO:0003674
GO:GO:0005488	GO:GO:0005515	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634
GO:GO:0005737	InterPro:IPR000225	InterPro:IPR011989	UniProt:K4BPY4	PFAM:PF00514	PFscan:PS50176
PANTHER:PTHR23315	PANTHER:PTHR23315:SF129	SMART:SM00185	SUPFAM:SSF48371	EnsemblPlantsGene:Solyc04g014810.2	EnsemblPlants:Solyc04g014810.2.1
UniParc:UPI00027667E2	SEG:seg	:	:	:	:

Description

No Description!

Coordinates

chr4:+:5050800..5053600

Molecular Weight (calculated)

48736.2 Da

IEP (calculated)

5.528

GRAVY (calculated)

-0.182

Length

451 amino acids

Sequence
(BLAST)

001: MVSLENSHSH VSSTTHHSQT RPYYYTPPPS SAKAHRRSIG RSMRTIRSNL FQPECENSGP VYENLTDSVV DFRLTELAKK PPVDKSSFSD AEFLEISQTF
101: SDFSAYSSDI SGELERLAYI PNSDPNQSSV SEPEPEPEPC VGFLQREMFS TEIIESIEPE DLQPTVKLCV DSLQSPSVAV KRSAAEKLRF LAKNRADNRA
201: LIGESGAIPA LLPLLRCSDP WTQEHAVTAL LNLSLHEPNK TLITNSGAIK SLIYVLKTGT ETSKQNAACG LLSLALIDEN KLTIGACGAI APLVALLING
301: TNRGKKDALT TLYKLCTVRL NKERAVSAGA VKPLVGLVCE EGTGLAEKAM VVLSSLTGIE MGQESIVEEG GIAALMEVIE DGSDKGREFA VMTLLQLCVD
401: SVRNRGLLVR EGGIPPLVAL SQTGTAKAKH KAETLLAYLR EPRQEASTST P

Best Arabidopsis Sequence Match ( AT4G16490.1 )
(BLAST)

001: MVSVEEPLSH SNSTRFPLTT DFYGSSSPSA ARLHRQAGRS MRTVRSNFYQ SGDQSCSFVG SIGDKSEYAS EFLSDSVIDM RLGELALKNS NSLNSNASSM
101: KEEAFLDISQ AFSDFSACSS DISGELQRLA CLPSPEADRN ESGGDNEAEH DPELEREPCL GFLQRENFST EIIECISPED LQPTVKLCID GLRSSSVAIK
201: RSAAAKLRLL AKNRADNRVL IGESGAIQAL IPLLRCNDPW TQEHAVTALL NLSLHDQNKA VIAAGGAIKS LVWVLKTGTE TSKQNAACAL LSLALLEENK
301: GSIGACGAIP PLVSLLLNGS CRGKKDALTT LYKLCTLQQN KERAVTAGAV KPLVDLVAEE GTGMAEKAMV VLSSLAAIDD GKEAIVEEGG IAALVEAIED
401: GSVKGKEFAI LTLLQLCSDS VRNRGLLVRE GAIPPLVGLS QSGSVSVRAK RKAERLLGYL REPRKEASSS SP

Arabidopsis Description

ARM repeat superfamily protein [Source:UniProtKB/TrEMBL;Acc:F4JMH0]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.