Factsheet for Solyc04g077850.2.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 3
cytosol 3
nucleus 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400027542	Potato	cytosol	98.6	98.6
Solyc12g088360.1.1	Tomato	cytosol	66.29	85.82
KRH15451	Soybean	cytosol	62.92	82.66
Bra040513.1-P	Field mustard	cytosol	60.39	81.75
CDY28679	Canola	cytosol	60.39	81.75
KRH05594	Soybean	cytosol	79.49	80.4
CDX74298	Canola	plastid	78.93	79.38
AT3G01400.1	Thale cress	cytosol	78.93	79.15
Bra001006.1-P	Field mustard	plastid	78.65	79.1
CDX91947	Canola	plastid	76.97	77.62
CDY02828	Canola	cytosol	73.88	74.29
Bra020360.1-P	Field mustard	cytosol	72.47	73.09
CDY32692	Canola	peroxisome	72.19	72.8
VIT_18s0001g09130.t01	Wine grape	cytosol	77.81	71.39
KRH52088	Soybean	cytosol	65.17	70.95
AT5G58680.1	Thale cress	cytosol	70.79	70.59
GSMUA_Achr4P03430_001	Banana	cytosol	48.31	63.94
GSMUA_Achr6P07710_001	Banana	cytosol	59.83	59.66
Os07t0587500-01	Rice	cytosol	57.87	56.91
GSMUA_Achr3P18890_001	Banana	cytosol	57.3	56.82
GSMUA_Achr10P...	Banana	cytosol	58.99	56.45
Zm00001d006726_P001	Maize	cytosol	56.46	55.83
Zm00001d021978_P001	Maize	cytosol	56.74	55.8
EER97464	Sorghum	cytosol	56.74	55.8
TraesCS2B01G213900.1	Wheat	cytosol	56.46	55.68
TraesCS2A01G193000.1	Wheat	cytosol	56.18	55.4
TraesCS2D01G194400.1	Wheat	cytosol	55.9	55.12
GSMUA_Achr4P14130_001	Banana	cytosol	49.16	50.43
GSMUA_Achr4P10960_001	Banana	endoplasmic reticulum	56.46	49.51
GSMUA_Achr7P26200_001	Banana	extracellular, golgi	55.62	47.83
GSMUA_Achr5P16030_001	Banana	cytosol	58.99	44.59
Os03t0435300-00	Rice	cytosol	41.85	37.25
Solyc11g012440.1.1	Tomato	cytosol, plastid	46.63	36.17
Zm00001d003967_P001	Maize	plastid	44.38	35.11
Solyc04g014810.2.1	Tomato	plastid	44.1	34.81
Solyc09g056450.2.1	Tomato	cytosol	30.34	24.05
Solyc04g050770.1.1	Tomato	cytosol	27.25	21.9
Solyc04g050780.1.1	Tomato	cytosol	26.4	21.81
Solyc09g025270.2.1	Tomato	cytosol	45.51	21.63
Solyc06g051090.1.1	Tomato	cytosol	33.71	21.35
Solyc11g008390.1.1	Tomato	cytosol	35.96	20.51
Solyc05g008230.2.1	Tomato	cytosol	37.08	20.31
Solyc04g007640.2.1	Tomato	cytosol	36.8	20.25
Solyc11g066040.1.1	Tomato	cytosol	36.8	19.76
Solyc12g094610.1.1	Tomato	cytosol	29.78	19.74
Solyc01g014230.2.1	Tomato	cytosol	44.94	19.73
Solyc12g100000.1.1	Tomato	cytosol, plastid	44.94	19.54
Solyc06g076040.2.1	Tomato	cytosol	35.96	19.36
Solyc04g082440.2.1	Tomato	cytosol	30.34	16.64
Solyc02g072080.1.1	Tomato	cytosol, mitochondrion	30.06	14.78
Solyc05g005670.1.1	Tomato	cytosol, mitochondrion	26.69	13.87
Solyc03g114160.1.1	Tomato	cytosol	24.72	12.9
Solyc09g018230.1.1	Tomato	plastid	22.75	11.77

Protein Annotations

Gene3D:1.25.10.10	MapMan:35.1	InterPro:ARM-like	InterPro:ARM-type_fold	InterPro:Armadillo	GO:GO:0003674
GO:GO:0005488	GO:GO:0005515	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634
GO:GO:0005737	InterPro:IPR000225	InterPro:IPR011989	UniProt:K4BUM2	PFAM:PF00514	PFscan:PS50176
PANTHER:PTHR23315	PANTHER:PTHR23315:SF64	SMART:SM00185	SUPFAM:SSF48371	EnsemblPlantsGene:Solyc04g077850.2	EnsemblPlants:Solyc04g077850.2.1
UniParc:UPI000276684C	:	:	:	:	:

Description

No Description!

Coordinates

chr4:+:62728726..62731135

Molecular Weight (calculated)

37972.7 Da

IEP (calculated)

5.647

GRAVY (calculated)

-0.023

Length

356 amino acids

Sequence
(BLAST)

001: METEIQSNFT YMGRTFTNLS INGSSSAFSD CNSDVSGEFP TASSQSRRLF LACASENSDE LIEQLVSDLE SSSIDEQKQA AIEIRLLAKN KPENRIKIAR
101: AGAIKPLISL ISSTDPQLQE NGVTAILNLS LCDENKELIA ASGAIKPLVR ALKVGTSTAR ENAACALLRL SQVEENKIAI GRSGAIPPLV NLLETGNFRG
201: KKDASTALYS LCSVKENKVR AVQAGVMKPL VELMADFSSN MVDKSAFVVS ELISVPEARP ALVDEGGIPV LVEIVEVGSQ RQKEIAVSIL LQICEDSVAY
301: RTMVAREGAI PPLVALSQSG TSRAKRKAEK LIDLLRQPRS GNGAATAVAR TSGVPV

Best Arabidopsis Sequence Match ( AT3G01400.1 )
(BLAST)

001: MEMENHRPGS FTYMGRKFSD LSLNDDSSAF SDCNSDRSGE FPTASSESRR LLLSCASENS DDLINHLVSH LDSSYSIDEQ KQAAMEIRLL SKNKPENRIK
101: IAKAGAIKPL ISLISSSDLQ LQEYGVTAIL NLSLCDENKE SIASSGAIKP LVRALKMGTP TAKENAACAL LRLSQIEENK VAIGRSGAIP LLVNLLETGG
201: FRAKKDASTA LYSLCSAKEN KIRAVQSGIM KPLVELMADF GSNMVDKSAF VMSLLMSVPE SKPAIVEEGG VPVLVEIVEV GTQRQKEMAV SILLQLCEES
301: VVYRTMVARE GAIPPLVALS QAGTSRAKQK AEALIELLRQ PRSISNGGAR SSSQL

Arabidopsis Description

ARM repeat superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q9SGH8]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.