Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 2
- mitochondrion 1
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr4P03430_001 | Banana | cytosol | 59.37 | 76.58 |
| GSMUA_Achr6P07710_001 | Banana | cytosol | 65.42 | 63.59 |
| GSMUA_Achr10P... | Banana | cytosol | 64.84 | 60.48 |
| GSMUA_Achr3P18890_001 | Banana | cytosol | 61.96 | 59.89 |
| GSMUA_Achr4P10960_001 | Banana | endoplasmic reticulum | 69.16 | 59.11 |
| Bra040513.1-P | Field mustard | cytosol | 43.8 | 57.79 |
| CDY28679 | Canola | cytosol | 43.52 | 57.41 |
| GSMUA_Achr7P26200_001 | Banana | extracellular, golgi | 68.01 | 57.0 |
| KRH15451 | Soybean | cytosol | 43.52 | 55.72 |
| TraesCS2D01G194400.1 | Wheat | cytosol | 55.91 | 53.74 |
| TraesCS2B01G213900.1 | Wheat | cytosol | 55.91 | 53.74 |
| TraesCS2A01G193000.1 | Wheat | cytosol | 55.91 | 53.74 |
| Os07t0587500-01 | Rice | cytosol | 55.91 | 53.59 |
| Zm00001d006726_P001 | Maize | cytosol | 55.04 | 53.06 |
| Solyc12g088360.1.1 | Tomato | cytosol | 41.79 | 52.73 |
| EER97464 | Sorghum | cytosol | 54.18 | 51.93 |
| Zm00001d021978_P001 | Maize | cytosol | 54.18 | 51.93 |
| KRH52088 | Soybean | cytosol | 46.97 | 49.85 |
| PGSC0003DMT400027542 | Potato | cytosol | 50.43 | 49.16 |
| Solyc04g077850.2.1 | Tomato | cytosol | 50.43 | 49.16 |
| GSMUA_Achr5P16030_001 | Banana | cytosol | 65.71 | 48.41 |
| KRH05594 | Soybean | cytosol | 48.99 | 48.3 |
| CDX91947 | Canola | plastid | 48.99 | 48.16 |
| Bra001006.1-P | Field mustard | plastid | 48.99 | 48.02 |
| CDX74298 | Canola | plastid | 48.99 | 48.02 |
| CDY32692 | Canola | peroxisome | 48.7 | 47.88 |
| Bra020360.1-P | Field mustard | cytosol | 48.7 | 47.88 |
| CDY02828 | Canola | cytosol | 48.7 | 47.74 |
| AT3G01400.1 | Thale cress | cytosol | 48.7 | 47.61 |
| PGSC0003DMT400030161 | Potato | cytosol | 48.13 | 46.65 |
| AT5G58680.1 | Thale cress | cytosol | 46.97 | 45.66 |
| VIT_18s0001g09130.t01 | Wine grape | cytosol | 48.41 | 43.3 |
| GSMUA_Achr9P12570_001 | Banana | cytosol | 36.02 | 41.67 |
| Os03t0435300-00 | Rice | cytosol | 42.94 | 37.25 |
| GSMUA_Achr4P06990_001 | Banana | plastid | 40.92 | 35.24 |
| GSMUA_Achr4P11070_001 | Banana | cytosol | 41.5 | 34.12 |
| Zm00001d003967_P001 | Maize | plastid | 44.09 | 34.0 |
| GSMUA_Achr3P29830_001 | Banana | cytosol | 39.48 | 32.93 |
| GSMUA_Achr1P22790_001 | Banana | mitochondrion | 40.35 | 30.91 |
| GSMUA_Achr6P06560_001 | Banana | cytosol | 25.36 | 23.59 |
| GSMUA_Achr10P... | Banana | cytosol | 25.36 | 23.53 |
| GSMUA_Achr4P01530_001 | Banana | plasma membrane | 39.19 | 22.26 |
| GSMUA_Achr9P01670_001 | Banana | cytosol | 26.8 | 19.96 |
| GSMUA_Achr8P25140_001 | Banana | plastid | 23.92 | 19.76 |
| GSMUA_Achr6P36530_001 | Banana | cytosol | 37.18 | 19.55 |
| GSMUA_Achr5P21360_001 | Banana | cytosol | 39.77 | 18.18 |
| GSMUA_Achr3P00280_001 | Banana | cytosol | 26.22 | 15.09 |
| GSMUA_Achr3P06160_001 | Banana | plastid | 23.63 | 14.46 |
| GSMUA_Achr10P... | Banana | cytosol | 25.65 | 14.22 |
| GSMUA_Achr9P15600_001 | Banana | cytosol | 27.38 | 14.05 |
| GSMUA_Achr1P24290_001 | Banana | cytosol | 24.21 | 13.75 |
| GSMUA_Achr9P14560_001 | Banana | cytosol | 23.05 | 13.68 |
| GSMUA_Achr6P34170_001 | Banana | cytosol | 25.07 | 13.1 |
| GSMUA_Achr4P00200_001 | Banana | plastid | 26.22 | 12.93 |
| GSMUA_Achr4P04900_001 | Banana | cytosol | 19.31 | 12.69 |
| GSMUA_Achr2P15530_001 | Banana | mitochondrion | 23.34 | 12.27 |
| GSMUA_Achr7P22130_001 | Banana | cytosol | 22.19 | 12.16 |
| GSMUA_Achr4P05030_001 | Banana | cytosol | 17.87 | 11.83 |
| GSMUA_Achr5P28670_001 | Banana | cytosol | 18.73 | 11.4 |
| GSMUA_Achr5P07140_001 | Banana | cytosol | 19.88 | 10.99 |
| GSMUA_Achr10P... | Banana | cytosol | 26.8 | 10.76 |
| GSMUA_Achr9P28820_001 | Banana | mitochondrion | 18.44 | 10.68 |
| GSMUA_Achr7P09440_001 | Banana | mitochondrion | 18.73 | 10.19 |
| GSMUA_Achr10P... | Banana | mitochondrion | 8.36 | 6.42 |
Protein Annotations
| Gene3D:1.25.10.10 | MapMan:35.1 | InterPro:ARM-like | InterPro:ARM-type_fold | InterPro:Armadillo | GO:GO:0003674 |
| GO:GO:0005488 | GO:GO:0005515 | EnsemblPlantsGene:GSMUA_Achr4G14130_001 | EnsemblPlants:GSMUA_Achr4P14130_001 | EnsemblPlants:GSMUA_Achr4T14130_001 | InterPro:IPR000225 |
| InterPro:IPR011989 | UniProt:M0SNS8 | PFAM:PF00514 | PFscan:PS50176 | PANTHER:PTHR23315 | PANTHER:PTHR23315:SF64 |
| SMART:SM00185 | SUPFAM:SSF48371 | UniParc:UPI0002954D06 | : | : | : |
Description
Putative U-box domain-containing protein 4 [Source:GMGC_GENE;Acc:GSMUA_Achr4G14130_001]
Coordinates
chr4:+:10562237..10563578
Molecular Weight (calculated)
37032.9 Da
IEP (calculated)
5.934
GRAVY (calculated)
0.020
Length
347 amino acids
Sequence
(BLAST)
(BLAST)
001: MMMMGSPPES HRRMSRSYSE TTDSTAPFSE CRSDRTGDLD GLLVCSDDDF SDEMVRGFIL DLESPSVESQ LRAVMVLRFL AKNSTENRLR IARAGAVAPL
101: VALLSHPDPQ MQEHGVTAIL NLSLCDENKA PIAAAGAVCH LVRALRAGTP AARENAASAL FRLAQLDDLR AVLAHSGAIP PLVALLETGS PRGKKDAATA
201: LYVLLATKDN VAPAVEAGVV HPLLDLMADP KSGMVDKAAF VLLCVLATPD GRAATVDEGG VPVLVDMLET GRGKQKKVAM LSLLQICQES DAHRRLVVRE
301: GAIPPLIALS QSSRDCEKKA EALVELLRQP TENGVSRRCG QLETMVA
101: VALLSHPDPQ MQEHGVTAIL NLSLCDENKA PIAAAGAVCH LVRALRAGTP AARENAASAL FRLAQLDDLR AVLAHSGAIP PLVALLETGS PRGKKDAATA
201: LYVLLATKDN VAPAVEAGVV HPLLDLMADP KSGMVDKAAF VLLCVLATPD GRAATVDEGG VPVLVDMLET GRGKQKKVAM LSLLQICQES DAHRRLVVRE
301: GAIPPLIALS QSSRDCEKKA EALVELLRQP TENGVSRRCG QLETMVA
001: MAEQSENNAE VEFLDQLIVI VNRMHERLLL IKQTQTSSVA ILADFFCPLS LEVMTDPVIV SSGQTYEKAF IKRWIDLGLK VCPKTRQTLT HTTLIPNYTV
101: KALIANWCET NDVKLPDPNK STSLNELSPL LSCTDSIPST GADVSARKVS NKSHDWDASS SETGKPSFSS RATEREGASP SRPASALGAS SPGISGNGYG
201: LDARRGSLND FEDRSNDSRE LRTDAPGRSS VSSTTRGSVE NGQTSENHHH RSPSATSTVS NEEFPRADAN ENSEESAHAT PYSSDASGEI RSGPLAATTS
301: AATRRDLSDF SPKFMDRRTR GQFWRRPSER LGSRIVSAPS NETRRDLSEV ETQVKKLVEE LKSSSLDTQR QATAELRLLA KHNMDNRIVI GNSGAIVLLV
401: ELLYSTDSAT QENAVTALLN LSINDNNKKA IADAGAIEPL IHVLENGSSE AKENSAATLF SLSVIEENKI KIGQSGAIGP LVDLLGNGTP RGKKDAATAL
501: FNLSIHQENK AMIVQSGAVR YLIDLMDPAA GMVDKAVAVL ANLATIPEGR NAIGQEGGIP LLVEVVELGS ARGKENAAAA LLQLSTNSGR FCNMVLQEGA
601: VPPLVALSQS GTPRAREKAQ ALLSYFRNQR HGNAGRG
101: KALIANWCET NDVKLPDPNK STSLNELSPL LSCTDSIPST GADVSARKVS NKSHDWDASS SETGKPSFSS RATEREGASP SRPASALGAS SPGISGNGYG
201: LDARRGSLND FEDRSNDSRE LRTDAPGRSS VSSTTRGSVE NGQTSENHHH RSPSATSTVS NEEFPRADAN ENSEESAHAT PYSSDASGEI RSGPLAATTS
301: AATRRDLSDF SPKFMDRRTR GQFWRRPSER LGSRIVSAPS NETRRDLSEV ETQVKKLVEE LKSSSLDTQR QATAELRLLA KHNMDNRIVI GNSGAIVLLV
401: ELLYSTDSAT QENAVTALLN LSINDNNKKA IADAGAIEPL IHVLENGSSE AKENSAATLF SLSVIEENKI KIGQSGAIGP LVDLLGNGTP RGKKDAATAL
501: FNLSIHQENK AMIVQSGAVR YLIDLMDPAA GMVDKAVAVL ANLATIPEGR NAIGQEGGIP LLVEVVELGS ARGKENAAAA LLQLSTNSGR FCNMVLQEGA
601: VPPLVALSQS GTPRAREKAQ ALLSYFRNQR HGNAGRG
Arabidopsis Description
RING-type E3 ubiquitin transferase [Source:UniProtKB/TrEMBL;Acc:F4ILG6]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.