Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- nucleus 1
- plastid 3
- cytosol 2
- peroxisome 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra001006.1-P | Field mustard | plastid | 99.15 | 99.15 |
| CDX91947 | Canola | plastid | 96.61 | 96.88 |
| CDY28679 | Canola | cytosol | 67.23 | 90.49 |
| AT3G01400.1 | Thale cress | cytosol | 88.42 | 88.17 |
| KRH15451 | Soybean | cytosol | 62.99 | 82.29 |
| CDY02828 | Canola | cytosol | 79.38 | 79.38 |
| KRH05594 | Soybean | cytosol | 78.81 | 79.26 |
| Solyc04g077850.2.1 | Tomato | cytosol | 79.38 | 78.93 |
| Solyc12g088360.1.1 | Tomato | cytosol | 61.3 | 78.91 |
| CDY32692 | Canola | peroxisome | 78.25 | 78.47 |
| PGSC0003DMT400027542 | Potato | cytosol | 78.53 | 78.09 |
| PGSC0003DMT400030161 | Potato | cytosol | 75.99 | 75.14 |
| KRH52088 | Soybean | cytosol | 64.12 | 69.42 |
| VIT_18s0001g09130.t01 | Wine grape | cytosol | 73.45 | 67.01 |
| GSMUA_Achr4P03430_001 | Banana | cytosol | 46.61 | 61.34 |
| GSMUA_Achr3P18890_001 | Banana | cytosol | 59.32 | 58.5 |
| GSMUA_Achr6P07710_001 | Banana | cytosol | 58.76 | 58.26 |
| Os07t0587500-01 | Rice | cytosol | 58.76 | 57.46 |
| Zm00001d006726_P001 | Maize | cytosol | 57.63 | 56.67 |
| EER97464 | Sorghum | cytosol | 57.91 | 56.63 |
| Zm00001d021978_P001 | Maize | cytosol | 57.91 | 56.63 |
| TraesCS2D01G194400.1 | Wheat | cytosol | 57.63 | 56.51 |
| TraesCS2B01G213900.1 | Wheat | cytosol | 57.63 | 56.51 |
| TraesCS2A01G193000.1 | Wheat | cytosol | 57.34 | 56.23 |
| GSMUA_Achr10P... | Banana | cytosol | 58.47 | 55.65 |
| GSMUA_Achr4P14130_001 | Banana | cytosol | 48.02 | 48.99 |
| GSMUA_Achr4P10960_001 | Banana | endoplasmic reticulum | 55.65 | 48.52 |
| GSMUA_Achr7P26200_001 | Banana | extracellular, golgi | 54.24 | 46.38 |
| GSMUA_Achr5P16030_001 | Banana | cytosol | 58.47 | 43.95 |
| Os03t0435300-00 | Rice | cytosol | 44.07 | 39.0 |
| CDX90518 | Canola | plastid | 50.0 | 38.9 |
| CDY09688 | Canola | cytosol | 49.15 | 38.33 |
| Zm00001d003967_P001 | Maize | plastid | 45.48 | 35.78 |
| CDX74050 | Canola | cytosol | 28.81 | 22.37 |
| CDY21412 | Canola | cytosol, endoplasmic reticulum | 37.01 | 21.55 |
| CDY04746 | Canola | cytosol, endoplasmic reticulum | 37.01 | 21.51 |
| CDY71737 | Canola | cytosol | 27.97 | 21.43 |
| CDY25764 | Canola | cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole | 35.59 | 21.43 |
| CDY08002 | Canola | cytosol | 27.4 | 21.32 |
| CDY28059 | Canola | cytosol | 27.68 | 21.21 |
| CDY12497 | Canola | cytosol | 35.31 | 20.94 |
| CDX76873 | Canola | cytosol, plastid | 44.07 | 20.88 |
| CDX78262 | Canola | cytosol | 40.68 | 20.51 |
| CDX73449 | Canola | cytosol | 40.4 | 20.31 |
| CDX78273 | Canola | cytosol | 35.88 | 20.03 |
| CDX72769 | Canola | cytosol | 34.18 | 19.77 |
| CDY02891 | Canola | cytosol | 40.96 | 19.67 |
| CDY64696 | Canola | cytosol, extracellular, mitochondrion, plastid | 40.68 | 19.51 |
| CDX96295 | Canola | cytosol, plasma membrane | 33.9 | 19.48 |
| CDY18649 | Canola | cytosol, plastid | 38.98 | 19.38 |
| CDX81323 | Canola | cytosol, plastid | 39.27 | 19.23 |
| CDY68037 | Canola | cytosol | 35.31 | 19.08 |
| CDX95193 | Canola | cytosol | 35.03 | 18.93 |
| CDY68352 | Canola | cytosol | 24.29 | 18.86 |
| CDY38506 | Canola | cytosol | 23.73 | 18.42 |
| CDY57440 | Canola | cytosol | 34.18 | 18.36 |
| CDX68379 | Canola | cytosol | 33.9 | 18.24 |
| CDX86080 | Canola | cytosol | 33.62 | 18.14 |
| CDY31736 | Canola | cytosol | 32.77 | 18.07 |
| CDX77213 | Canola | cytosol | 32.77 | 18.04 |
| CDY12838 | Canola | cytosol | 35.59 | 18.03 |
| CDX99112 | Canola | cytosol | 33.33 | 18.02 |
| CDX68380 | Canola | cytosol | 23.73 | 15.79 |
| CDX70810 | Canola | cytosol | 20.34 | 15.25 |
| CDY48332 | Canola | mitochondrion, plastid | 30.23 | 15.2 |
| CDX94661 | Canola | plastid | 30.51 | 15.19 |
| CDY46092 | Canola | endoplasmic reticulum, golgi, plasma membrane, plastid | 43.79 | 15.0 |
| CDX90186 | Canola | mitochondrion | 29.94 | 14.87 |
| CDX99816 | Canola | plastid | 29.66 | 14.5 |
| CDY43332 | Canola | mitochondrion | 29.38 | 14.46 |
| CDY51235 | Canola | extracellular, golgi | 21.19 | 14.45 |
| CDY37666 | Canola | cytosol, plastid | 26.84 | 14.37 |
| CDY38931 | Canola | cytosol | 24.58 | 14.15 |
| CDX73439 | Canola | plastid | 35.88 | 14.1 |
| CDY43686 | Canola | plastid | 26.27 | 14.07 |
| CDY04747 | Canola | cytosol, golgi | 16.1 | 12.93 |
| CDX71307 | Canola | cytosol | 23.45 | 12.33 |
| CDY31406 | Canola | cytosol | 23.45 | 12.31 |
| CDX93411 | Canola | mitochondrion | 23.16 | 11.75 |
| CDY55050 | Canola | cytosol | 22.88 | 11.64 |
| CDY54132 | Canola | cytosol | 22.32 | 11.62 |
| CDY24520 | Canola | cytosol | 22.03 | 11.57 |
| CDX70805 | Canola | cytosol | 22.6 | 5.19 |
| CDY51234 | Canola | cytosol | 22.6 | 4.83 |
| CDY04344 | Canola | cytosol | 0.56 | 0.63 |
| CDY04342 | Canola | cytosol | 0.56 | 0.6 |
Protein Annotations
| EnsemblPlants:CDX74298 | EnsemblPlantsGene:GSBRNA2T00112091001 | Gene3D:1.25.10.10 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 |
| InterPro:ARM-like | InterPro:ARM-type_fold | InterPro:Armadillo | InterPro:IPR000225 | InterPro:IPR011989 | PANTHER:PTHR23315 |
| PANTHER:PTHR23315:SF64 | PFAM:PF00514 | PFscan:PS50176 | ProteinID:CDX74298 | ProteinID:CDX74298.1 | SEG:seg |
| SMART:SM00185 | SUPFAM:SSF48371 | UniParc:UPI0004EEC3EE | MapMan:35.1 | : | : |
Description
BnaA03g27490D
Coordinates
chrLK031800:+:2116466..2117530
Molecular Weight (calculated)
37635.3 Da
IEP (calculated)
7.790
GRAVY (calculated)
-0.054
Length
354 amino acids
Sequence
(BLAST)
(BLAST)
001: MESDNSAGFT YLGRNFSNLS VNDHSSAFSD CNSDRSGEFP SASSESRRLL LSCASDNSDD LIRHLVAHLS SSSSSVDEQK QAAMEIRLLS KNKPENRIKI
101: ANAGAVKPLI SLISSSDPQL QEYGVTAILN LSLCDENKDL IASSGAIKPL VRALKMGTPT AKENAACALL RLSQVEDNKV AIGRSGAIPL LVSLLETGGF
201: RAKKDASTAL YSLCSAKENK LRAVQAGIMK PLVELMADFG SNMVDKSAFV MSLLMSVPES KPALVEEGGV PVLVEIVEVG TQRQKEIAVS ILLQLCEESV
301: VYRTMVAREG AIPPLVALTQ AGTSRAKQKA EALIGLLRQP RSGVSSNGGR SSQL
101: ANAGAVKPLI SLISSSDPQL QEYGVTAILN LSLCDENKDL IASSGAIKPL VRALKMGTPT AKENAACALL RLSQVEDNKV AIGRSGAIPL LVSLLETGGF
201: RAKKDASTAL YSLCSAKENK LRAVQAGIMK PLVELMADFG SNMVDKSAFV MSLLMSVPES KPALVEEGGV PVLVEIVEVG TQRQKEIAVS ILLQLCEESV
301: VYRTMVAREG AIPPLVALTQ AGTSRAKQKA EALIGLLRQP RSGVSSNGGR SSQL
001: MEMENHRPGS FTYMGRKFSD LSLNDDSSAF SDCNSDRSGE FPTASSESRR LLLSCASENS DDLINHLVSH LDSSYSIDEQ KQAAMEIRLL SKNKPENRIK
101: IAKAGAIKPL ISLISSSDLQ LQEYGVTAIL NLSLCDENKE SIASSGAIKP LVRALKMGTP TAKENAACAL LRLSQIEENK VAIGRSGAIP LLVNLLETGG
201: FRAKKDASTA LYSLCSAKEN KIRAVQSGIM KPLVELMADF GSNMVDKSAF VMSLLMSVPE SKPAIVEEGG VPVLVEIVEV GTQRQKEMAV SILLQLCEES
301: VVYRTMVARE GAIPPLVALS QAGTSRAKQK AEALIELLRQ PRSISNGGAR SSSQL
101: IAKAGAIKPL ISLISSSDLQ LQEYGVTAIL NLSLCDENKE SIASSGAIKP LVRALKMGTP TAKENAACAL LRLSQIEENK VAIGRSGAIP LLVNLLETGG
201: FRAKKDASTA LYSLCSAKEN KIRAVQSGIM KPLVELMADF GSNMVDKSAF VMSLLMSVPE SKPAIVEEGG VPVLVEIVEV GTQRQKEMAV SILLQLCEES
301: VVYRTMVARE GAIPPLVALS QAGTSRAKQK AEALIELLRQ PRSISNGGAR SSSQL
Arabidopsis Description
ARM repeat superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q9SGH8]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.