CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra006452.1-P	Field mustard	cytosol	99.03	98.8
CDX70810	Canola	cytosol	24.62	86.44
CDY51235	Canola	extracellular, golgi	22.21	70.91
AT5G18320.1	Thale cress	cytosol	15.39	55.68
CDY38506	Canola	cytosol	15.21	55.26
CDY68352	Canola	cytosol	15.15	55.04
AT5G18340.1	Thale cress	nucleus	13.82	50.22
AT5G18330.1	Thale cress	cytosol	13.28	49.44
CDX70805	Canola	cytosol	36.63	39.39
GSMUA_Achr6P06560_001	Banana	cytosol	7.85	34.85
GSMUA_Achr10P...	Banana	cytosol	7.85	34.76
KRH68828	Soybean	cytosol	8.99	34.65
PGSC0003DMT400011486	Potato	cytosol	7.42	34.45
Solyc09g056450.2.1	Tomato	cytosol	9.29	34.3
PGSC0003DMT400016998	Potato	cytosol	9.29	34.3
VIT_00s0524g00030.t01	Wine grape	cytosol	9.23	34.08
CDX74050	Canola	cytosol	9.29	33.77
VIT_04s0043g00840.t01	Wine grape	cytosol	9.23	33.63
CDY08002	Canola	cytosol	9.17	33.41
PGSC0003DMT400039084	Potato	cytosol	8.81	32.96
KRG97080	Soybean	cytosol, nucleus	8.75	32.95
Solyc04g050780.1.1	Tomato	cytosol	8.33	32.02
CDY71737	Canola	cytosol	8.87	31.82
CDY28059	Canola	cytosol	8.87	31.82
KRG99581	Soybean	cytosol	8.81	31.67
GSMUA_Achr9P01670_001	Banana	cytosol	8.87	31.55
KRH46608	Soybean	cytosol	8.75	31.45
Solyc04g050770.1.1	Tomato	cytosol	8.39	31.38
KRG92593	Soybean	cytosol	8.33	31.15
Os02t0488600-01	Rice	cytosol, nucleus	7.85	30.73
Zm00001d016501_P001	Maize	cytosol	8.21	29.25
EES06804	Sorghum	cytosol	8.15	29.09
Os04t0348400-01	Rice	cytosol	7.91	28.54
TraesCS2A01G276400.1	Wheat	nucleus	7.91	28.48
TraesCS2B01G294100.1	Wheat	nucleus	7.91	28.48
TraesCS2D01G275400.1	Wheat	nucleus	7.91	28.48
HORVU2Hr1G067610.6	Barley	cytosol	7.97	27.85
CDY28679	Canola	cytosol	4.04	25.48
CDX74298	Canola	plastid	4.83	22.6
CDX91947	Canola	plastid	4.77	22.38
CDY32692	Canola	peroxisome	4.71	22.1
CDY02828	Canola	cytosol	4.65	21.75
CDX99112	Canola	cytosol	8.03	20.31
CDY25764	Canola	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	7.12	20.07
CDX68379	Canola	cytosol	7.97	20.06
CDX86080	Canola	cytosol	7.91	19.97
CDX68380	Canola	cytosol	6.34	19.74
CDY12497	Canola	cytosol	7.06	19.6
CDY31736	Canola	cytosol	7.48	19.31
CDY21412	Canola	cytosol, endoplasmic reticulum	7.0	19.08
CDY04746	Canola	cytosol, endoplasmic reticulum	7.0	19.05
CDX77213	Canola	cytosol	7.36	18.97
CDX78273	Canola	cytosol	7.24	18.93
CDX96295	Canola	cytosol, plasma membrane	6.64	17.86
CDX72769	Canola	cytosol	6.58	17.81
CDY68037	Canola	cytosol	7.0	17.71
CDY04747	Canola	cytosol, golgi	4.71	17.69
CDX95193	Canola	cytosol	6.88	17.4
CDY57440	Canola	cytosol	6.76	17.0
CDX73449	Canola	cytosol	7.06	16.62
CDX78262	Canola	cytosol	7.0	16.52
CDY12838	Canola	cytosol	6.94	16.45
CDY02891	Canola	cytosol	7.3	16.42
CDY64696	Canola	cytosol, extracellular, mitochondrion, plastid	7.3	16.4
CDY18649	Canola	cytosol, plastid	6.94	16.15
CDX90186	Canola	mitochondrion	6.82	15.85
CDX81323	Canola	cytosol, plastid	6.88	15.77
CDY43332	Canola	mitochondrion	6.76	15.58
CDY48332	Canola	mitochondrion, plastid	6.58	15.48
CDX94661	Canola	plastid	6.64	15.47
CDX99816	Canola	plastid	6.76	15.47
CDY09688	Canola	cytosol	4.22	15.42
CDX90518	Canola	plastid	4.22	15.38
CDX71307	Canola	cytosol	6.22	15.3
CDY31406	Canola	cytosol	6.22	15.28
CDX76873	Canola	cytosol, plastid	6.76	14.99
CDY43686	Canola	plastid	5.97	14.98
CDY37666	Canola	cytosol, plastid	5.91	14.83
CDY55050	Canola	cytosol	6.04	14.37
CDX93411	Canola	mitochondrion	6.04	14.33
CDY38931	Canola	cytosol	5.31	14.31
CDX73439	Canola	plastid	7.3	13.43
CDY24520	Canola	cytosol	5.01	12.31
CDY54132	Canola	cytosol	4.95	12.06
CDY46092	Canola	endoplasmic reticulum, golgi, plasma membrane, plastid	6.88	11.04
CDY04344	Canola	cytosol	1.51	7.84
CDY04342	Canola	cytosol	1.45	7.21

Protein Annotations

Gene3D:1.25.10.10	MapMan:26.8.2.1	Gene3D:3.30.40.10	Gene3D:3.40.50.10140	Gene3D:3.40.50.300	Gene3D:3.80.10.10
GO:A0A078IP99	UniProt:A0A078IP99	InterPro:ARM-like	InterPro:ARM-type_fold	EnsemblPlants:CDY51234	ProteinID:CDY51234
ProteinID:CDY51234.1	ncoils:Coil	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004842
GO:GO:0005488	GO:GO:0005515	GO:GO:0006464	GO:GO:0006950	GO:GO:0006952	GO:GO:0007154
GO:GO:0007165	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016567	GO:GO:0016740
GO:GO:0019538	GO:GO:0043531	EnsemblPlantsGene:GSBRNA2T00002994001	InterPro:IPR000157	InterPro:IPR003613	InterPro:IPR011989
InterPro:IPR013083	InterPro:IPR032675	InterPro:IPR035897	InterPro:LRR_dom_sf	InterPro:Leu-rich_rpt_3	InterPro:NB-ARC
InterPro:P-loop_NTPase	PFAM:PF00931	PFAM:PF01582	PFAM:PF04564	PFAM:PF07725	PRINTS:PR00364
PFscan:PS50104	PFscan:PS51698	PANTHER:PTHR43904	PANTHER:PTHR43904:SF1	SMART:SM00255	SMART:SM00504
SUPFAM:SSF46785	SUPFAM:SSF48371	SUPFAM:SSF52058	SUPFAM:SSF52200	SUPFAM:SSF52540	SUPFAM:SSF57850
InterPro:TIR_dom	InterPro:Toll_tir_struct_dom_sf	UniPathway:UPA00143	UniParc:UPI0004EDDE6F	InterPro:Ubox_domain	InterPro:WH_DNA-bd_sf
InterPro:Znf_RING/FYVE/PHD	SEG:seg	:	:	:	:

Description

BnaA03g07040DRING-type E3 ubiquitin transferase [Source:UniProtKB/TrEMBL;Acc:A0A078IP99]

Coordinates

chrLK032977:+:34574..42762

Molecular Weight (calculated)

186664.0 Da

IEP (calculated)

7.423

GRAVY (calculated)

-0.133

Length

1657 amino acids

Sequence
(BLAST)

0001: MEESTAESTA ATADALRMEL KKTIAEILDD GGVSEDRAID EAVRMLNLLR EVESKLPDSD TSSSSPTSLP EVPKEFKCML SHAIMSEPVV IASGQTYERR
0101: YIQQWLMCKV TCPKTREVLS HRLWSPNYLV AELIAQWCQA NKYDRPEPSD KPIGLFNDDI DLLLQRISSP SSVEDQTKAA NELRRQTKRF DNVPASFVAE
0201: IPESITRLLT PLSALGEDID SNPGFQKDII TALLYISGLE ENKTAVAQHP LVIPLLTKSL KQGTAKTRRN SAEALWLLSK LDSNKTIIGN SDTLKALVHV
0301: IKEDHFTAAI SASYAVFHLC CLPENREKVV SEGLIPALIN RIKERSYVYV YFALLALMTA QNGVIEEIED LGFVDGMFSI LRNTSCSVTG ENGTLIFRRM
0401: CGLNTGDRDR ERTRLKLIKE EEDKYSTFSK LAKQGSQRAM MEAEAILQWI KRSGTEATAG MTWQRRKQQA EIDVFSPAIQ APLLLTHLPI WSRYSIRRRP
0501: RRPPAPEMVR SATVRLPPLS SRSPELPPFP PPVTILLLPP NLIRDSSLLM VAKRALEFGS EFGNEPELFV QIIWTAKCYE KMANGQLAEL HVYNGQLEKM
0601: WGRTHGNLLV FYNIKSCLLS KSFVILFKIS WCLLVMASSS CSSLYDVFLS FRGEDVRKGF LSHVVKEFKS KGIEAFIDNE MERGKSVGPT LEKAIRQSRV
0701: AIVLLSRNYA SSSWCLDELV EIMKCREEDK QRVITVFYEV DPSDVRKQIG DFGKAFDDTC VGRTEEVTHV WRQALKEVAD IAGYASSNCG SEADLINELA
0801: SNVMDVKVIG IWGPAGIGKT TAARVLYDQV SPEFQFSTFL ENIKGCFKRS FGNDHQLKLR FQEKLLSQIF NQKDIVVRHL GGAPQKLSDQ KVLVVLDEVD
0901: SWWQLEEVAN RAWFGRGSMV IITTEDRKLL KALGLEANQI YKMKFPTTDE ALQILCLYAF GQKFPNYDFE TLAWEVTELA GNLPLGLRVM GSYLRGMSKK
1001: EWIDALPSLR SSLDSEIEST LKLSYNVLSN KEKSLFLHIA CFFAGFKVDR VKSILEKSDL NVNHGLQTLA YRSLIYRENG YVEMHSLLQQ MGKEIGTGTV
1101: LGIKLLKLEG EEIKISKSAF QGIRNLQFLD IDGGTLNTPE GLNCLPNKLR YIHWKQSPLR FWPSKFSEKL LVELIMPNSN FEKLWEGIKP FPCLKRMDLS
1201: SSEYLKEIPD LSKATSLEIL DLHYCRSLLE LPSSIGRLIN LEKLDLHYCR SLEKLSGCSN LEKISGCSSL KELDLSDSGI GALELPSSVS TWSCFYRLNM
1301: SGLSDLKKFP KVPYSIVELV LSGTGIEEVP PWIENLFRLQ QLIMFGCRNL EIVSPNISKL ENLQTIALCK HDDVPEMSYG DEVFTAVIVG GPDSHGIWRF
1401: RSDLNVHYIL PICLPKKALT SPISLHLFSG GLKTIPDCIR RLSGLSELSI TGCIILTELP QLPGSCLSLD AHFCRSLRRI NSSFQNPNIC LNFAGCYNLN
1501: QKARKLIQTS VCKYALLPGN IVPAHFTRRA FSSSLTIDLT PRPLPSSFRF KACILLSKVS FHYLREQNVF CRVRGKQNGL TVLYGSNQIH HMPCLGTSQN
1601: HLYIFEDSFS LNQHFPEAEV TTFSELSFLF TVDDYKALVV YGCGVRILEV LDGKETE

Best Arabidopsis Sequence Match ( AT5G18350.1 )
(BLAST)

0001: MQPNRASSSL SSTPTRTWTH HVFLSFRGED VRKGFLSHIQ KEFERKGIFP FVDTKMKRGS SIGPVLSDAI IVSKIAIVLL SKNYASSTWC LNELVNIMKC
0101: REEFGQTVMT VFYEVDPSDV RKQTGDFGIA FETTCVGKTE EVKQSWRQAL IDVSNIVGEV YRIWSKESDL IDKIAEDVLD ELNYTMSRDF DGYVGIGRHM
0201: RKMKSLLCLE SGDVRMIGIV GPPGIGKTTI ARALRDQISE NFQLTAFIDD IRLTYPRRCY GESGLKPPTA FMNDDRRKIV LQTNFLSEIL NQKDIVIHNL
0301: NAAPNWLKDR KVLVILDDVD HLEQLDAMAK ETGWFGYGSR IIITTQDRKL LKAHNIDYIY EVGLPRKDDA LQIFCLSAFG QNFPHDDFQY LACEVTQLAG
0401: ELPLGLKVLG SYLKGMSLEE WKNALPRLKT CLDGDIEKTL RYSYDALSRK DQALFLHIAC LFRGYEVGHV KQWLGKSDLD VDHGLDVLRQ KSLISIDMGF
0501: LNMHSLLQQL GVEIVRNQSS QEPRERQFLV DVNDISDVFT YNTAGTKSIL GIRLNVPEIE EKIVIDELVF DGMTNLQFLF VNEGFGDKLS LPRGLNCLPG
0601: KLRVLHWNYC PLRLWPSKFS ANFLVELVMR GNNFEKLWEK ILPLKSLKRM DLSHSKDLKE IPDLSNATNL EELDLSSCSG LLELTDSIGK ATNLKRLKLA
0701: CCSLLKKLPS SIGDATNLQV LDLFHCESFE ELPKSIGKLT NLKVLELMRC YKLVTLPNSI KTPKLPVLSM SECEDLQAFP TYINLEDCTQ LKMFPEISTN
0801: VKELDLRNTA IENVPSSICS WSCLYRLDMS ECRNLKEFPN VPVSIVELDL SKTEIEEVPS WIENLLLLRT LTMVGCKRLN IISPNISKLK NLEDLELFTD
0901: GVSGDAASFY AFVEFSDRHD WTLESDFQVH YILPICLPKM AISLRFWSYD FETIPDCINC LPGLSELDVS GCRNLVSLPQ LPGSLLSLDA NNCESLERIN
1001: GSFQNPEICL NFANCINLNQ EARKLIQTSA CEYAILPGAE VPAHFTDQDT SGSLTINITT KTLPSRLRYK ACILLSKGNI NLEDEDEDSF MSVSCHVTGK
1101: QNILILPSPV LRGYTDHLYI FDYSFSLHED FPEAKEATFS ELMFDFIVHT KSWNVKSCGV HLFEEKNLPE KNEVTPCVCV ISLKQMDLSK SENLKEIPDL
1201: SKAINIEELC LSYCGSLVPR SRLYHTSLQA AFSEFIRINL QQERE

Arabidopsis Description

Disease resistance protein (TIR-NBS-LRR class) family [Source:UniProtKB/TrEMBL;Acc:F4JWL7]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.