Factsheet for Bra006452.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY51234	Canola	cytosol	98.8	99.03
Bra006451.1-P	Field mustard	cytosol	22.88	81.37
AT5G18320.1	Thale cress	cytosol	15.65	56.77
AT5G18340.1	Thale cress	nucleus	13.97	50.88
AT5G18330.1	Thale cress	cytosol	13.31	49.66
GSMUA_Achr6P06560_001	Banana	cytosol	7.83	34.85
GSMUA_Achr10P...	Banana	cytosol	7.83	34.76
KRH68828	Soybean	cytosol	8.97	34.65
PGSC0003DMT400011486	Potato	cytosol	7.41	34.45
PGSC0003DMT400016998	Potato	cytosol	9.27	34.3
Solyc09g056450.2.1	Tomato	cytosol	9.27	34.3
VIT_00s0524g00030.t01	Wine grape	cytosol	9.21	34.08
Bra001247.1-P	Field mustard	cytosol	9.33	33.99
Bra040374.1-P	Field mustard	cytosol	9.21	33.92
VIT_04s0043g00840.t01	Wine grape	cytosol	9.21	33.63
PGSC0003DMT400039084	Potato	cytosol	8.79	32.96
KRG97080	Soybean	cytosol, nucleus	8.73	32.95
Solyc04g050780.1.1	Tomato	cytosol	8.31	32.02
Bra029642.1-P	Field mustard	cytosol	8.85	31.82
KRG99581	Soybean	cytosol	8.79	31.67
GSMUA_Achr9P01670_001	Banana	cytosol	8.85	31.55
KRH46608	Soybean	cytosol	8.73	31.45
Solyc04g050770.1.1	Tomato	cytosol	8.37	31.38
KRG92593	Soybean	cytosol	8.31	31.15
Os02t0488600-01	Rice	cytosol, nucleus	7.83	30.73
Zm00001d016501_P001	Maize	cytosol	8.19	29.25
EES06804	Sorghum	cytosol	8.13	29.09
Os04t0348400-01	Rice	cytosol	7.89	28.54
TraesCS2D01G275400.1	Wheat	nucleus	7.89	28.48
TraesCS2B01G294100.1	Wheat	nucleus	7.89	28.48
TraesCS2A01G276400.1	Wheat	nucleus	7.89	28.48
HORVU2Hr1G067610.6	Barley	cytosol	7.95	27.85
Bra040513.1-P	Field mustard	cytosol	3.97	25.1
Bra020360.1-P	Field mustard	cytosol	4.76	22.38
Bra001006.1-P	Field mustard	plastid	4.76	22.32
Bra018212.1-P	Field mustard	cytosol	8.07	20.58
Bra033820.1-P	Field mustard	cytosol	8.01	20.21
Bra012355.1-P	Field mustard	plasma membrane	7.04	19.9
Bra007105.1-P	Field mustard	cytosol	7.34	19.24
Bra035665.1-P	Field mustard	cytosol	7.53	19.17
Bra024559.1-P	Field mustard	cytosol, plasma membrane	6.98	19.05
Bra002153.1-P	Field mustard	cytosol	15.59	18.96
Bra027977.1-P	Field mustard	cytosol	7.04	17.94
Bra016165.1-P	Field mustard	cytosol, plasma membrane	6.62	17.86
Bra012155.1-P	Field mustard	cytosol	6.74	17.0
Bra007097.1-P	Field mustard	cytosol	7.04	16.67
Bra014787.1-P	Field mustard	cytosol	7.34	16.53
Bra001998.1-P	Field mustard	cytosol	5.78	16.08
Bra037117.1-P	Field mustard	cytosol, plastid	6.98	15.8
Bra032309.1-P	Field mustard	plastid	6.68	15.77
Bra010834.1-P	Field mustard	mitochondrion	6.8	15.72
Bra038470.1-P	Field mustard	plastid	4.39	15.6
Bra012713.1-P	Field mustard	cytosol	4.21	15.38
Bra019022.1-P	Field mustard	cytosol	6.2	15.28
Bra021899.1-P	Field mustard	plastid	6.02	15.13
Bra032180.1-P	Field mustard	cytosol	5.3	15.07
Bra019924.1-P	Field mustard	mitochondrion	6.14	14.68
Bra031521.1-P	Field mustard	cytosol	5.06	12.41

Protein Annotations

Gene3D:1.25.10.10	MapMan:26.8.2.1	Gene3D:3.30.40.10	Gene3D:3.40.50.10140	Gene3D:3.40.50.300	Gene3D:3.80.10.10
InterPro:ARM-like	InterPro:ARM-type_fold	EnsemblPlantsGene:Bra006452	EnsemblPlants:Bra006452.1	EnsemblPlants:Bra006452.1-P	GO:GO:0000166
GO:GO:0003674	GO:GO:0003824	GO:GO:0004842	GO:GO:0005488	GO:GO:0005515	GO:GO:0006464
GO:GO:0006950	GO:GO:0006952	GO:GO:0007154	GO:GO:0007165	GO:GO:0008150	GO:GO:0008152
GO:GO:0009987	GO:GO:0016567	GO:GO:0016740	GO:GO:0019538	GO:GO:0043531	InterPro:IPR000157
InterPro:IPR003613	InterPro:IPR011989	InterPro:IPR013083	InterPro:IPR032675	InterPro:IPR035897	InterPro:LRR_dom_sf
InterPro:Leu-rich_rpt_3	UniProt:M4CQG3	InterPro:NB-ARC	InterPro:P-loop_NTPase	PFAM:PF00931	PFAM:PF01582
PFAM:PF04564	PFAM:PF07725	PRINTS:PR00364	PFscan:PS50104	PFscan:PS51698	PANTHER:PTHR43904
PANTHER:PTHR43904:SF1	SMART:SM00255	SMART:SM00504	SUPFAM:SSF46785	SUPFAM:SSF48371	SUPFAM:SSF52058
SUPFAM:SSF52200	SUPFAM:SSF52540	SUPFAM:SSF57850	InterPro:TIR_dom	InterPro:Toll_tir_struct_dom_sf	UniParc:UPI000253FE60
InterPro:Ubox_domain	InterPro:WH_DNA-bd_sf	InterPro:Znf_RING/FYVE/PHD	SEG:seg	:	:

Description

AT5G18320 (E=1e-126) | armadillo/beta-catenin repeat family protein / U-box domain-containing protein

Coordinates

chrA03:-:3550082..3558713

Molecular Weight (calculated)

186835.0 Da

IEP (calculated)

7.233

GRAVY (calculated)

-0.149

Length

1661 amino acids

Sequence
(BLAST)

0001: MEESTAESTA ATADALRMEL KKTIAEILDD GGVSEDRGET DGSSRVLKAI DEAVRMLNLL REVESKLPDS DTSSSSPTSL PEVPKEFKCM LSHAIMSEPV
0101: VIASGQTYER RYIQQWLMCK VTCPKTREVL SHRLWSPNYL VAELIAQWCQ ANKYDRPEPS DKPIGLFNDD IDLLLQRISS PSSVEDQTKA ANELRRQTKR
0201: FDNVPASFVA EIPESITRLL TPLSALGEDI DSNPGFQKDI ITALLYISGL EENKTAVAQH PLVIPLLTKS LKQGTAKTRR NSAEALWLLS KLDSNKTIIG
0301: NSDTLKALVH VIKEDHFTAA ISASYAVFHL CCLPENREKV VSEGLIPALI NRIKERSYVY VYFALLALMT AQNGVIEEIE DLGFVDGMFS ILRNTSCSVT
0401: GENGTLIFRR MCGLNTGDRD RERTRLKLIK EEEDKYSTFS KLAKQGSQRA MMEAEAILQW IKRSGTEATA GMTWQRRKQQ AEIDVFSPAI QAPLLLTHLP
0501: IWSRYSIRRR PRRPPAPEMV RSATVRLPPL SSRSPELPPF PPPVTILLLP PNLIRDSSLL MVAKRALEFG SEFGNEPELF VQIIWTAKCY EKMANGQLAE
0601: LHVYNGQLEK MWGGPMLHGN RSGSKSFVIL FKISWCLLVM ASSSCSSLYD VFLSFRGEDV RKGFLSHVVK EFKSKGIEAF IDNEMERGKS VGPTLEKAIR
0701: QSRVAIVLLS RNYASSSWCL DELVEIMKCR EEDKQRVITV FYEVDPSDVR KQIGDFGKAF DDTCVGRTEE VTHVWRQALK EVADIAGYAS SNCGSEADLI
0801: NELASNVMDV KVIGIWGPAG IGKTTAARVL YDQVSPEFQF STFLENIKGC FKRSFGNDHQ LKLRFQEKLL SQIFNQKDIV VRHLGGAPQK LSDQKVLVVL
0901: DEVDSWWQLE EVANRAWFGR GSMVIITTED RKLLKALGLE ANQIYKMKFP TTDEALQILC LYAFGQKFPN YDFETLAWEV TELAGNLPLG LRVMGSYLRG
1001: MSKKEWIDAL PSLRSSLDSE IESTLKLSYN VLSNKEKSLF LHIACFFAGF KVDRVKSILE KSDLNVNHGL QTLAYRSLIY RENGYVEMHS LLQQMGKEIG
1101: TGTVLGIKLL KLEGEEIKIS KSAFQGIRNL QFLDIDGGTL NTPEGLNCLP NKLRYIHWKQ SPLRFWPSKF SEKLLVELIM PNSNFEKLWE GIKPFPCLKR
1201: MDLSSSEYLK EIPDLSKATS LEILDLHYCR SLLELPSSIG RLINLEKLDL HYCRSLEKLS GCSNLEKISG CSSLKELDLS DSGIGALELP SSVSTWSCFY
1301: RLNMSGLSDL KKFPNVPYSI VELVLSGTGI EEVPPWIENL FRLQQLIMFG CRNLEIVSPN ISKLENLQTI ALCKHDDVPE MSYGDEVFTA VIVGGPDSHG
1401: IWRFRSDLNV HYILPICLPK KALTSPISLH LFSGGLKTIP DCIRRLSGLS ELSITGCIIL TELPQLPGSC LSLDAHFCRS LRRINSSFQN PNICLNFAGC
1501: YNLNQKARKL IQTSVCKYAL LPGNIVPAHF THRAFSSSLT IDLTPRPLPS SFRFKACILL SKVSFHYLRE QNVFCRVRGK QNGLTVLYGS NQIHHMHCLG
1601: TSQNHLYIFE DSFSLNQHFP EAEVTTFSEL SFLFTVDDYK ALVVYGCGVR ILEVLDGKET E

Best Arabidopsis Sequence Match ( AT5G18350.1 )
(BLAST)

0001: MQPNRASSSL SSTPTRTWTH HVFLSFRGED VRKGFLSHIQ KEFERKGIFP FVDTKMKRGS SIGPVLSDAI IVSKIAIVLL SKNYASSTWC LNELVNIMKC
0101: REEFGQTVMT VFYEVDPSDV RKQTGDFGIA FETTCVGKTE EVKQSWRQAL IDVSNIVGEV YRIWSKESDL IDKIAEDVLD ELNYTMSRDF DGYVGIGRHM
0201: RKMKSLLCLE SGDVRMIGIV GPPGIGKTTI ARALRDQISE NFQLTAFIDD IRLTYPRRCY GESGLKPPTA FMNDDRRKIV LQTNFLSEIL NQKDIVIHNL
0301: NAAPNWLKDR KVLVILDDVD HLEQLDAMAK ETGWFGYGSR IIITTQDRKL LKAHNIDYIY EVGLPRKDDA LQIFCLSAFG QNFPHDDFQY LACEVTQLAG
0401: ELPLGLKVLG SYLKGMSLEE WKNALPRLKT CLDGDIEKTL RYSYDALSRK DQALFLHIAC LFRGYEVGHV KQWLGKSDLD VDHGLDVLRQ KSLISIDMGF
0501: LNMHSLLQQL GVEIVRNQSS QEPRERQFLV DVNDISDVFT YNTAGTKSIL GIRLNVPEIE EKIVIDELVF DGMTNLQFLF VNEGFGDKLS LPRGLNCLPG
0601: KLRVLHWNYC PLRLWPSKFS ANFLVELVMR GNNFEKLWEK ILPLKSLKRM DLSHSKDLKE IPDLSNATNL EELDLSSCSG LLELTDSIGK ATNLKRLKLA
0701: CCSLLKKLPS SIGDATNLQV LDLFHCESFE ELPKSIGKLT NLKVLELMRC YKLVTLPNSI KTPKLPVLSM SECEDLQAFP TYINLEDCTQ LKMFPEISTN
0801: VKELDLRNTA IENVPSSICS WSCLYRLDMS ECRNLKEFPN VPVSIVELDL SKTEIEEVPS WIENLLLLRT LTMVGCKRLN IISPNISKLK NLEDLELFTD
0901: GVSGDAASFY AFVEFSDRHD WTLESDFQVH YILPICLPKM AISLRFWSYD FETIPDCINC LPGLSELDVS GCRNLVSLPQ LPGSLLSLDA NNCESLERIN
1001: GSFQNPEICL NFANCINLNQ EARKLIQTSA CEYAILPGAE VPAHFTDQDT SGSLTINITT KTLPSRLRYK ACILLSKGNI NLEDEDEDSF MSVSCHVTGK
1101: QNILILPSPV LRGYTDHLYI FDYSFSLHED FPEAKEATFS ELMFDFIVHT KSWNVKSCGV HLFEEKNLPE KNEVTPCVCV ISLKQMDLSK SENLKEIPDL
1201: SKAINIEELC LSYCGSLVPR SRLYHTSLQA AFSEFIRINL QQERE

Arabidopsis Description

Disease resistance protein (TIR-NBS-LRR class) family [Source:UniProtKB/TrEMBL;Acc:F4JWL7]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.