Factsheet for Bra014787.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
mitochondrion 3
cytosol 2
plastid 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY64696	Canola	cytosol, extracellular, mitochondrion, plastid	99.46	99.46
Bra007097.1-P	Field mustard	cytosol	82.93	87.18
AT3G54790.1	Thale cress	cytosol	87.53	85.0
VIT_07s0005g03520.t01	Wine grape	cytosol	56.64	53.11
Bra040513.1-P	Field mustard	cytosol	18.02	50.57
GSMUA_Achr6P36530_001	Banana	cytosol	43.63	48.79
PGSC0003DMT400026700	Potato	cytosol	50.81	48.2
Solyc09g025270.2.1	Tomato	cytosol	48.78	48.06
KRG95672	Soybean	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	52.85	47.91
GSMUA_Achr5P21360_001	Banana	cytosol	46.88	45.59
KRH67390	Soybean	cytosol, plastid	51.76	44.63
KRH32190	Soybean	cytosol	37.67	41.93
Bra001006.1-P	Field mustard	plastid	19.65	40.96
Bra020360.1-P	Field mustard	cytosol	19.38	40.51
Bra037117.1-P	Field mustard	cytosol, plastid	38.89	39.1
Bra012155.1-P	Field mustard	cytosol	32.93	36.87
Bra007105.1-P	Field mustard	cytosol	28.86	33.6
Bra032180.1-P	Field mustard	cytosol	26.42	33.39
Bra012713.1-P	Field mustard	cytosol	20.33	32.97
Bra038470.1-P	Field mustard	plastid	20.6	32.48
Bra035665.1-P	Field mustard	cytosol	28.32	32.06
Bra040374.1-P	Field mustard	cytosol	19.38	31.71
Bra018212.1-P	Field mustard	cytosol	27.78	31.49
Bra033820.1-P	Field mustard	cytosol	28.05	31.46
Bra027977.1-P	Field mustard	cytosol	27.64	31.29
Bra001247.1-P	Field mustard	cytosol	19.11	30.92
Bra012355.1-P	Field mustard	plasma membrane	24.53	30.78
Bra029642.1-P	Field mustard	cytosol	19.24	30.74
Bra024559.1-P	Field mustard	cytosol, plasma membrane	24.8	30.05
Bra016165.1-P	Field mustard	cytosol, plasma membrane	24.66	29.55
Bra001998.1-P	Field mustard	cytosol	20.19	24.96
Bra032309.1-P	Field mustard	plastid	23.44	24.57
Bra006451.1-P	Field mustard	cytosol	15.18	23.98
Bra021899.1-P	Field mustard	plastid	21.14	23.6
Bra019022.1-P	Field mustard	cytosol	21.54	23.59
Bra010834.1-P	Field mustard	mitochondrion	22.76	23.37
Bra019924.1-P	Field mustard	mitochondrion	19.65	20.86
Bra031521.1-P	Field mustard	cytosol	18.7	20.38
Bra002153.1-P	Field mustard	cytosol	17.48	9.44
Bra006452.1-P	Field mustard	cytosol	16.53	7.34

Protein Annotations

Gene3D:1.25.10.10	Gene3D:3.30.40.10	MapMan:35.1	InterPro:ARM-like	InterPro:ARM-type_fold	InterPro:Armadillo
EnsemblPlantsGene:Bra014787	EnsemblPlants:Bra014787.1	EnsemblPlants:Bra014787.1-P	GO:GO:0003674	GO:GO:0003824	GO:GO:0004842
GO:GO:0005488	GO:GO:0005515	GO:GO:0006464	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987
GO:GO:0016567	GO:GO:0016740	GO:GO:0019538	InterPro:IPR000225	InterPro:IPR003613	InterPro:IPR011989
InterPro:IPR013083	UniProt:M4DE68	PFAM:PF00514	PFAM:PF04564	PFscan:PS50176	PFscan:PS51698
PANTHER:PTHR23315	PANTHER:PTHR23315:SF119	SMART:SM00185	SMART:SM00504	SUPFAM:SSF48371	SUPFAM:SSF57850
UniParc:UPI0002544D00	InterPro:Ubox_domain	InterPro:Znf_RING/FYVE/PHD	SEG:seg	:	:

Description

AT3G54790 (E=1e-169) | armadillo/beta-catenin repeat family protein / U-box domain-containing protein

Coordinates

chrA04:+:3149586..3151959

Molecular Weight (calculated)

81386.4 Da

IEP (calculated)

6.035

GRAVY (calculated)

-0.247

Length

738 amino acids

Sequence
(BLAST)

001: MDPVPVRCLL NSISRYLHLV ACQTIRYKPI QTCIGNVVHL LKLLKPFLDD VVDCKVPPDD CLNSACEDLD SVVNQAREFL EDWSPKMSKL FGVFHSELLL
101: EKVQTCSLEI SRILVQLSQS SPVTSSVQGV EVNLLQRCMQ EIECFKQERT LSEHMKDTVP LDTDDLDSII HMMGLISNQD LLKESIAVEK ARIRSQTSKS
201: KEKMEQMDQL IDLVSCIREH MLKTEFLEVA KGVSIPPYFR CPLSTELMLD PVIVASGQTF DRTSIKKWLD NGLDVCPRTR QVLTHQELIP NYTVKAMIAS
301: WLEENSIKLP ANCDGGGDAS SMANNMGSND FNRTESFRFS LRSSSFTSRS SLETGNGFEK VKINVPASLC GESQCKDLEN FELSSSGQSY THSRSESVCS
401: VVSSVDYVPS VTNETQSIQE NHQSCSEMSP KKQNSESSSN VNHEYSECSS HTMKLVQDLK DGSSKEKTAA AAEIRQLTIN NVENRVQIGR CGAITPLLSL
501: LYSEEELTQE HAVTALLNLS ISEVNKAMIA EAGATEPLVH VLNTGNDRAK ENSAATLFSL SVLQVNRERI GQSNAAIQAL VNLLGKGTFR GKKDAASALF
601: NLSITHENKA RIVQAKAVKY LVELLDPELE MVDKAVALLA NLSAVGEGRQ AIVREGGIPL LVETVDSGSQ RGKENAASVL LQLCLNSPKF CTLVLQEGAI
701: PPLVALSQSG TQRAKEKAQQ LLSHFRNQRD ARMKKGRS

Best Arabidopsis Sequence Match ( AT3G54790.3 )
(BLAST)

001: MDPVPVRCLL NSISRYLHLV ACQTIRFNPI QTCIGNMVLL LKLLKPLLDE VVDCKIPSDD CLYKGCEDLD SVVNQAREFL EDWSPKLSKL FGVFQCEVLL
101: GKVQTCSLEI SRILLQLSQS SPVTSSVQSV ERCVQETESF KQEGTLMELM ENALRNQKDD ITSLDNNHLE SIIQMLGLIS NQDLLKESIT VEKERIRSQA
201: SKSEEDMEQT EQLIELVLCI REHMLKTEFL EVAKGISIPP YFRCPLSTEL MLDPVIVASG QTFDRTSIKK WLDNGLAVCP RTRQVLTHQE LIPNYTVKAM
301: IASWLEANRI NLATNSCHQY DGGDASSMAN NMGSQDFNRT ESFRFSLRSS SLTSRSSLET GNGFEKLKIN VSASLCGESQ SKDLEIFELL SPGQSYTHSR
401: SESVCSVVSS VDYVPSVTHE TESILGNHQS SSEMSPKKNL ESSNNVNHEH SAAKTYECSV HDLDDSGTMT TSHTIKLVED LKSGSNKVKT AAAAEIRHLT
501: INSIENRVHI GRCGAITPLL SLLYSEEKLT QEHAVTALLN LSISELNKAM IVEVGAIEPL VHVLNTGNDR AKENSAASLF SLSVLQVNRE RIGQSNAAIQ
601: ALVNLLGKGT FRGKKDAASA LFNLSITHDN KARIVQAKAV KYLVELLDPD LEMVDKAVAL LANLSAVGEG RQAIVREGGI PLLVETVDLG SQRGKENAAS
701: VLLQLCLNSP KFCTLVLQEG AIPPLVALSQ SGTQRAKEKA QQLLSHFRNQ RDARMKKGRS

Arabidopsis Description

PUB3U-box domain-containing protein 3 [Source:UniProtKB/Swiss-Prot;Acc:Q8GWV5]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.