Factsheet for Bra040513.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY28679	Canola	cytosol	98.48	98.48
KRH15451	Soybean	cytosol	80.99	78.6
Solyc12g088360.1.1	Tomato	cytosol	79.47	76.0
Bra001006.1-P	Field mustard	plastid	90.49	67.23
GSMUA_Achr4P03430_001	Banana	cytosol	64.64	63.2
Bra020360.1-P	Field mustard	cytosol	82.51	61.47
KRH05594	Soybean	cytosol	81.75	61.08
Solyc04g077850.2.1	Tomato	cytosol	81.75	60.39
PGSC0003DMT400027542	Potato	cytosol	80.99	59.83
PGSC0003DMT400030161	Potato	cytosol	79.47	58.38
KRH52088	Soybean	cytosol	71.86	57.8
VIT_18s0001g09130.t01	Wine grape	cytosol	78.33	53.09
GSMUA_Achr6P07710_001	Banana	cytosol	66.92	49.3
Zm00001d021978_P001	Maize	cytosol	67.3	48.9
EER97464	Sorghum	cytosol	67.3	48.9
GSMUA_Achr3P18890_001	Banana	cytosol	66.16	48.47
Zm00001d006726_P001	Maize	cytosol	66.16	48.33
Os07t0587500-01	Rice	cytosol	66.16	48.07
TraesCS2B01G213900.1	Wheat	cytosol	65.02	47.37
TraesCS2D01G194400.1	Wheat	cytosol	65.02	47.37
TraesCS2A01G193000.1	Wheat	cytosol	64.64	47.09
GSMUA_Achr10P...	Banana	cytosol	65.02	45.97
GSMUA_Achr4P14130_001	Banana	cytosol	57.79	43.8
GSMUA_Achr4P10960_001	Banana	endoplasmic reticulum	66.54	43.1
GSMUA_Achr7P26200_001	Banana	extracellular, golgi	61.98	39.37
GSMUA_Achr5P16030_001	Banana	cytosol	65.78	36.73
Os03t0435300-00	Rice	cytosol	51.33	33.75
Zm00001d003967_P001	Maize	plastid	57.03	33.33
Bra012713.1-P	Field mustard	cytosol	54.75	31.65
Bra038470.1-P	Field mustard	plastid	53.61	30.13
Bra012355.1-P	Field mustard	plasma membrane	46.01	20.58
Bra024559.1-P	Field mustard	cytosol, plasma membrane	47.15	20.36
Bra001247.1-P	Field mustard	cytosol	34.6	19.96
Bra040374.1-P	Field mustard	cytosol	33.46	19.51
Bra016165.1-P	Field mustard	cytosol, plasma membrane	45.63	19.48
Bra029642.1-P	Field mustard	cytosol	33.84	19.26
Bra007105.1-P	Field mustard	cytosol	44.11	18.3
Bra007097.1-P	Field mustard	cytosol	48.29	18.09
Bra014787.1-P	Field mustard	cytosol	50.57	18.02
Bra037117.1-P	Field mustard	cytosol, plastid	47.91	17.17
Bra035665.1-P	Field mustard	cytosol	42.21	17.02
Bra033820.1-P	Field mustard	cytosol	42.59	17.02
Bra018212.1-P	Field mustard	cytosol	41.83	16.9
Bra027977.1-P	Field mustard	cytosol	41.44	16.72
Bra012155.1-P	Field mustard	cytosol	41.83	16.69
Bra006451.1-P	Field mustard	cytosol	25.1	14.13
Bra001998.1-P	Field mustard	cytosol	31.18	13.74
Bra032309.1-P	Field mustard	plastid	35.74	13.35
Bra021899.1-P	Field mustard	plastid	32.32	12.86
Bra010834.1-P	Field mustard	mitochondrion	34.98	12.8
Bra019022.1-P	Field mustard	cytosol	31.56	12.31
Bra032180.1-P	Field mustard	cytosol	24.71	11.13
Bra019924.1-P	Field mustard	mitochondrion	28.52	10.79
Bra031521.1-P	Field mustard	cytosol	27.76	10.78
Bra002153.1-P	Field mustard	cytosol	27.76	5.34
Bra006452.1-P	Field mustard	cytosol	25.1	3.97

Protein Annotations

EnsemblPlants:Bra040513.1	EnsemblPlants:Bra040513.1-P	EnsemblPlantsGene:Bra040513	Gene3D:1.25.10.10	GO:GO:0003674	GO:GO:0005488
GO:GO:0005515	InterPro:ARM-like	InterPro:ARM-type_fold	InterPro:Armadillo	InterPro:IPR000225	InterPro:IPR011989
PANTHER:PTHR23315	PANTHER:PTHR23315:SF64	PFAM:PF00514	PFscan:PS50176	SEG:seg	SMART:SM00185
SUPFAM:SSF48371	UniParc:UPI000254508E	UniProt:M4FHD5	MapMan:35.1	:	:

Description

AT3G01400 (E=3e-117) | armadillo/beta-catenin repeat family protein

Coordinates

chrA01:-:28549782..28550573

Molecular Weight (calculated)

28204.7 Da

IEP (calculated)

7.945

GRAVY (calculated)

0.126

Length

263 amino acids

Sequence
(BLAST)

001: MEIRLLSKHK PENRVKIAEA GAIKPLVSLI SSSDPLLQEY GVTAILNLSL CDENKDLIAS SGAVKPLVWA LKMGTPTAKE NAACALLRLS QLEDNKIAIG
101: RSGAIPLLVN LLETGGFRAK KDASTALYSL CSAKENKIRA VEAGIMKPLV ELMADFGSNM VDKSAFVMSL LMSVPESKAA VVEEGGVPVL VEIVEDGTQR
201: QKEMAVSILL QICEESVVYR TMVAREGAIP PLVALSQAGG TSRAKHKAEA LIELLRQPRS HSY

Best Arabidopsis Sequence Match ( AT3G01400.1 )
(BLAST)

001: MEMENHRPGS FTYMGRKFSD LSLNDDSSAF SDCNSDRSGE FPTASSESRR LLLSCASENS DDLINHLVSH LDSSYSIDEQ KQAAMEIRLL SKNKPENRIK
101: IAKAGAIKPL ISLISSSDLQ LQEYGVTAIL NLSLCDENKE SIASSGAIKP LVRALKMGTP TAKENAACAL LRLSQIEENK VAIGRSGAIP LLVNLLETGG
201: FRAKKDASTA LYSLCSAKEN KIRAVQSGIM KPLVELMADF GSNMVDKSAF VMSLLMSVPE SKPAIVEEGG VPVLVEIVEV GTQRQKEMAV SILLQLCEES
301: VVYRTMVARE GAIPPLVALS QAGTSRAKQK AEALIELLRQ PRSISNGGAR SSSQL

Arabidopsis Description

ARM repeat superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q9SGH8]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.