Factsheet for GSMUA_Achr5P16030_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr6P07710_001	Banana	cytosol	67.73	89.36
GSMUA_Achr10P...	Banana	cytosol	66.03	83.6
GSMUA_Achr3P18890_001	Banana	cytosol	62.84	82.45
GSMUA_Achr4P03430_001	Banana	cytosol	43.31	75.84
Bra040513.1-P	Field mustard	cytosol	36.73	65.78
GSMUA_Achr4P14130_001	Banana	cytosol	48.41	65.71
CDY28679	Canola	cytosol	36.52	65.4
GSMUA_Achr4P10960_001	Banana	endoplasmic reticulum	55.63	64.53
KRH15451	Soybean	cytosol	36.94	64.21
Os07t0587500-01	Rice	cytosol	49.26	64.09
TraesCS2B01G213900.1	Wheat	cytosol	49.04	63.99
TraesCS2D01G194400.1	Wheat	cytosol	49.04	63.99
TraesCS2A01G193000.1	Wheat	cytosol	48.83	63.71
EER97464	Sorghum	cytosol	48.2	62.71
Zm00001d021978_P001	Maize	cytosol	48.2	62.71
Zm00001d006726_P001	Maize	cytosol	47.35	61.94
KRH05594	Soybean	cytosol	44.37	59.38
Solyc12g088360.1.1	Tomato	cytosol	34.61	59.27
Solyc04g077850.2.1	Tomato	cytosol	44.59	58.99
GSMUA_Achr7P26200_001	Banana	extracellular, golgi	51.8	58.94
PGSC0003DMT400027542	Potato	cytosol	44.37	58.71
Bra001006.1-P	Field mustard	plastid	43.95	58.47
CDX74298	Canola	plastid	43.95	58.47
KRH52088	Soybean	cytosol	40.13	57.8
CDX91947	Canola	plastid	43.31	57.79
PGSC0003DMT400030161	Potato	cytosol	43.52	57.26
AT3G01400.1	Thale cress	cytosol	43.1	57.18
CDY32692	Canola	peroxisome	42.68	56.94
Bra020360.1-P	Field mustard	cytosol	42.46	56.66
CDY02828	Canola	cytosol	42.25	56.21
AT5G58680.1	Thale cress	cytosol	40.55	53.5
VIT_18s0001g09130.t01	Wine grape	cytosol	43.31	52.58
Os03t0435300-00	Rice	cytosol	39.49	46.5
GSMUA_Achr9P12570_001	Banana	cytosol	29.51	46.33
GSMUA_Achr4P06990_001	Banana	plastid	34.18	39.95
Zm00001d003967_P001	Maize	plastid	38.0	39.78
GSMUA_Achr4P11070_001	Banana	cytosol	34.61	38.63
GSMUA_Achr1P22790_001	Banana	mitochondrion	34.39	35.76
GSMUA_Achr3P29830_001	Banana	cytosol	31.21	35.34
GSMUA_Achr10P...	Banana	cytosol	20.81	26.2
GSMUA_Achr6P06560_001	Banana	cytosol	20.17	25.47
GSMUA_Achr4P01530_001	Banana	plasma membrane	32.27	24.88
GSMUA_Achr6P36530_001	Banana	cytosol	31.21	22.27
GSMUA_Achr8P25140_001	Banana	plastid	19.75	22.14
GSMUA_Achr9P01670_001	Banana	cytosol	21.44	21.67
GSMUA_Achr5P21360_001	Banana	cytosol	30.57	18.97
GSMUA_Achr3P00280_001	Banana	cytosol	22.93	17.91
GSMUA_Achr1P24290_001	Banana	cytosol	21.66	16.69
GSMUA_Achr10P...	Banana	cytosol	21.66	16.29
GSMUA_Achr9P15600_001	Banana	cytosol	22.93	15.98
GSMUA_Achr3P06160_001	Banana	plastid	18.68	15.52
GSMUA_Achr9P14560_001	Banana	cytosol	18.26	14.7
GSMUA_Achr2P15530_001	Banana	mitochondrion	20.38	14.55
GSMUA_Achr4P00200_001	Banana	plastid	21.23	14.2
GSMUA_Achr6P34170_001	Banana	cytosol	19.96	14.16
GSMUA_Achr7P22130_001	Banana	cytosol	18.68	13.9
GSMUA_Achr9P28820_001	Banana	mitochondrion	17.2	13.52
GSMUA_Achr5P28670_001	Banana	cytosol	15.71	12.98
GSMUA_Achr5P07140_001	Banana	cytosol	17.2	12.9
GSMUA_Achr4P04900_001	Banana	cytosol	14.23	12.69
GSMUA_Achr10P...	Banana	cytosol	22.72	12.38
GSMUA_Achr4P05030_001	Banana	cytosol	13.38	12.02
GSMUA_Achr7P09440_001	Banana	mitochondrion	16.14	11.91
GSMUA_Achr10P...	Banana	mitochondrion	8.07	8.41

Protein Annotations

EnsemblPlants:GSMUA_Achr5P16030_001	EnsemblPlants:GSMUA_Achr5T16030_001	EnsemblPlantsGene:GSMUA_Achr5G16030_001	Gene3D:1.25.10.10	GO:GO:0003674	GO:GO:0005488
GO:GO:0005515	InterPro:ARM-like	InterPro:ARM-type_fold	InterPro:Armadillo	InterPro:IPR000225	InterPro:IPR011989
PANTHER:PTHR23315	PANTHER:PTHR23315:SF64	PFAM:PF00514	PFscan:PS50176	SEG:seg	SMART:SM00185
SUPFAM:SSF48371	UniParc:UPI000296B7A0	UniProt:M0SYY2	MapMan:35.1	:	:

Description

spotted leaf 11, putative, expressed [Source:GMGC_GENE;Acc:GSMUA_Achr5G16030_001]

Coordinates

chr5:+:12645351..12646979

Molecular Weight (calculated)

50772.7 Da

IEP (calculated)

8.422

GRAVY (calculated)

-0.020

Length

471 amino acids

Sequence
(BLAST)

001: MEMGIPSNYR YMGRSYSDGG DSSGAFSDCN SDRSGEFPSY GSPTSSSSSS SGGGGLQRLL VACAADYSDE VVRGLISDLE SPAATVESQR RAAMELRLLA
101: KHNPENRLRI VAAGAVGPLV ALLSHPDPLL QEHGVTAILN LSLCEENKTL IAAAGAIRPL VRALRTGTPA ARENAACALV RLAQLDDLRA AIGRYGAIPP
201: LVALLESSAP RGKKDAATAL FTLLASRENK IRAVEAGIVR PLLDLMADPE SGMVDKAAYV LHAVVEVAEG RAAAVVEYGV PVLVEMVETG TPRQKEIAVR
301: SLFEICRESA IYRKMVTHEG AIPPLVALSQ SGTKKAKEKA EALIELLRQP RTAGVDEERK ILLRLFLGVF SSRKKSKCNI RIGEAGREMA RCGAWGRSVY
401: AKVARKDDCR MVAEWRSMWA CDMVLWVCFP SATMEIVTKP SMCMCRTVIR ANISKMFVNE GENVCEARCG I

Best Arabidopsis Sequence Match ( AT3G01400.1 )
(BLAST)

001: MEMENHRPGS FTYMGRKFSD LSLNDDSSAF SDCNSDRSGE FPTASSESRR LLLSCASENS DDLINHLVSH LDSSYSIDEQ KQAAMEIRLL SKNKPENRIK
101: IAKAGAIKPL ISLISSSDLQ LQEYGVTAIL NLSLCDENKE SIASSGAIKP LVRALKMGTP TAKENAACAL LRLSQIEENK VAIGRSGAIP LLVNLLETGG
201: FRAKKDASTA LYSLCSAKEN KIRAVQSGIM KPLVELMADF GSNMVDKSAF VMSLLMSVPE SKPAIVEEGG VPVLVEIVEV GTQRQKEMAV SILLQLCEES
301: VVYRTMVARE GAIPPLVALS QAGTSRAKQK AEALIELLRQ PRSISNGGAR SSSQL

Arabidopsis Description

ARM repeat superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q9SGH8]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.