CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 2
mitochondrion 1
endoplasmic reticulum 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, endoplasmic reticulum, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	endoplasmic reticulum
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH15451	Soybean	cytosol	72.16	93.73
Bra040513.1-P	Field mustard	cytosol	61.08	81.75
CDY28679	Canola	cytosol	61.08	81.75
Solyc12g088360.1.1	Tomato	cytosol	63.07	80.73
AT3G01400.1	Thale cress	cytosol	80.4	79.72
Solyc04g077850.2.1	Tomato	cytosol	80.4	79.49
PGSC0003DMT400027542	Potato	cytosol	79.83	78.93
Bra001006.1-P	Field mustard	plastid	79.26	78.81
CDX74298	Canola	plastid	79.26	78.81
PGSC0003DMT400030161	Potato	cytosol	79.26	77.93
CDX91947	Canola	plastid	77.84	77.62
KRH52088	Soybean	cytosol	68.75	74.01
CDY02828	Canola	cytosol	73.86	73.45
Bra020360.1-P	Field mustard	cytosol	73.3	73.09
CDY32692	Canola	peroxisome	73.01	72.8
AT5G58680.1	Thale cress	cytosol	71.59	70.59
VIT_18s0001g09130.t01	Wine grape	cytosol	76.42	69.33
GSMUA_Achr4P03430_001	Banana	cytosol	46.59	60.97
GSMUA_Achr6P07710_001	Banana	cytosol	59.66	58.82
Os07t0587500-01	Rice	cytosol	58.81	57.18
GSMUA_Achr3P18890_001	Banana	cytosol	57.95	56.82
Zm00001d021978_P001	Maize	cytosol	58.24	56.63
EER97464	Sorghum	cytosol	58.24	56.63
GSMUA_Achr10P...	Banana	cytosol	59.66	56.45
Zm00001d006726_P001	Maize	cytosol	57.67	56.39
TraesCS2B01G213900.1	Wheat	cytosol	57.67	56.23
TraesCS2D01G194400.1	Wheat	cytosol	57.39	55.96
TraesCS2A01G193000.1	Wheat	cytosol	57.1	55.68
KRH17146	Soybean	cytosol	33.81	50.0
GSMUA_Achr4P14130_001	Banana	cytosol	48.3	48.99
GSMUA_Achr4P10960_001	Banana	endoplasmic reticulum	55.4	48.03
GSMUA_Achr7P26200_001	Banana	extracellular, golgi	54.55	46.38
GSMUA_Achr5P16030_001	Banana	cytosol	59.38	44.37
Os03t0435300-00	Rice	cytosol	44.6	39.25
KRH01984	Soybean	cytosol	45.45	37.65
KRH51173	Soybean	cytosol	45.17	37.15
KRH11541	Soybean	plastid	48.01	36.98
KRH36562	Soybean	plastid	48.01	36.9
Zm00001d003967_P001	Maize	plastid	44.6	34.89
KRH04403	Soybean	mitochondrion	32.95	32.04
KRH68828	Soybean	cytosol	30.68	25.12
KRG92593	Soybean	cytosol	30.11	23.93
KRG97080	Soybean	cytosol, nucleus	29.83	23.86
KRG99581	Soybean	cytosol	28.98	22.13
KRH46608	Soybean	cytosol	28.41	21.69
KRG91959	Soybean	cytosol	34.94	19.49
KRH30135	Soybean	cytosol	46.31	19.45
KRG89279	Soybean	cytosol	35.51	19.2
KRH34817	Soybean	cytosol	34.38	19.15
KRH72794	Soybean	plasma membrane	44.03	19.07
KRG98177	Soybean	cytosol	45.45	19.02
KRH24807	Soybean	cytosol	35.51	18.88
KRH50347	Soybean	nucleus	34.66	18.65
KRH29807	Soybean	cytosol	34.94	18.61
KRG95672	Soybean	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	42.61	18.43
KRH40395	Soybean	cytosol	31.53	17.48
KRH00831	Soybean	cytosol	31.53	17.48
KRH33490	Soybean	cytosol	25.85	17.33
KRH67390	Soybean	cytosol, plastid	40.91	16.82
KRG99865	Soybean	cytosol	28.12	16.05
KRH59027	Soybean	mitochondrion	31.25	15.38
KRH42917	Soybean	mitochondrion	30.97	15.24
KRH11061	Soybean	mitochondrion, plastid	30.97	15.22
KRH21208	Soybean	mitochondrion	30.4	14.94
KRH73275	Soybean	cytosol	21.31	14.73
KRH76105	Soybean	cytosol, plastid	24.15	12.11
KRH03317	Soybean	cytosol, plastid	23.01	11.98
KRH54418	Soybean	cytosol, plastid	22.44	11.57
KRH69547	Soybean	cytosol, plastid	23.3	11.5
KRH32190	Soybean	cytosol	21.02	11.16
KRH65448	Soybean	plastid	10.51	7.58

Protein Annotations

Gene3D:1.25.10.10	EntrezGene:100797550	MapMan:35.1	UniProt:A0A0R0FHK0	EMBL:ACUP02010760	InterPro:ARM-like
InterPro:ARM-type_fold	InterPro:Armadillo	EnsemblPlantsGene:GLYMA_17G235600	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0005737	InterPro:IPR000225
InterPro:IPR011989	EnsemblPlants:KRH05594	ProteinID:KRH05594	ProteinID:KRH05594.1	PFAM:PF00514	PFscan:PS50176
PANTHER:PTHR23315	PANTHER:PTHR23315:SF64	SMART:SM00185	SUPFAM:SSF48371	UniParc:UPI000189D671	SEG:seg

Description

hypothetical protein

Coordinates

chr17:-:39067324..39069617

Molecular Weight (calculated)

37626.4 Da

IEP (calculated)

7.068

GRAVY (calculated)

0.001

Length

352 amino acids

Sequence
(BLAST)

001: MGTEGYTYMG RSLSELRIND DSSSSAFSDC NSDRSGEFAT ASSQTRRFLI ACATENSDDL IRQLVADLHS SSIDDQKQAA MEIRLLAKNK PENRIKIAKA
101: GAIKPLISLI SSPDLQLQEY GVTAILNLSL CDENKEVIAS SGAIKPLVRA LNSGTATAKE NAACALLRLS QVEENKAAIG RSGAIPLLVS LLESGGFRAK
201: KDASTALYSL CTVKENKIRA VKAGIMKVLV ELMADFESNM VDKSAYVVSV LVAVPEARVA LVEEGGVPVL VEIVEVGTQR QKEIAVVILL QVCEDSVTYR
301: TMVAREGAIP PLVALSQSGT NRAKQKAEKL IELLRQPRSG NGAARSTSEV VA

Best Arabidopsis Sequence Match ( AT3G01400.1 )
(BLAST)

001: MEMENHRPGS FTYMGRKFSD LSLNDDSSAF SDCNSDRSGE FPTASSESRR LLLSCASENS DDLINHLVSH LDSSYSIDEQ KQAAMEIRLL SKNKPENRIK
101: IAKAGAIKPL ISLISSSDLQ LQEYGVTAIL NLSLCDENKE SIASSGAIKP LVRALKMGTP TAKENAACAL LRLSQIEENK VAIGRSGAIP LLVNLLETGG
201: FRAKKDASTA LYSLCSAKEN KIRAVQSGIM KPLVELMADF GSNMVDKSAF VMSLLMSVPE SKPAIVEEGG VPVLVEIVEV GTQRQKEMAV SILLQLCEES
301: VVYRTMVARE GAIPPLVALS QAGTSRAKQK AEALIELLRQ PRSISNGGAR SSSQL

Arabidopsis Description

ARM repeat superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q9SGH8]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.