Factsheet for Zm00001d003967_P001

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 3
mitochondrion 2
cytosol 1
extracellular 1
endoplasmic reticulum 1
vacuole 2
plasma membrane 1
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, mitochondrion, plastid, secretory
ChloroP:	plastid
iPSORT:	mitochondrion
MultiLoc:	cytosol
Predotar:	secretory
PProwler:	mitochondrion
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	vacuole

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d021978_P001	Maize	cytosol	49.56	61.6
GSMUA_Achr4P03430_001	Banana	cytosol	36.44	60.97
EER97464	Sorghum	cytosol	48.67	60.5
Zm00001d006726_P001	Maize	cytosol	46.89	58.61
TraesCS2B01G213900.1	Wheat	cytosol	46.22	57.62
Os07t0587500-01	Rice	cytosol	46.22	57.46
TraesCS2A01G193000.1	Wheat	cytosol	46.0	57.34
TraesCS2D01G194400.1	Wheat	cytosol	45.78	57.06
Bra040513.1-P	Field mustard	cytosol	33.33	57.03
CDY28679	Canola	cytosol	33.11	56.65
KRH15451	Soybean	cytosol	33.11	54.98
Solyc12g088360.1.1	Tomato	cytosol	32.89	53.82
GSMUA_Achr6P07710_001	Banana	cytosol	39.33	49.58
GSMUA_Achr3P18890_001	Banana	cytosol	38.89	48.75
GSMUA_Achr10P...	Banana	cytosol	40.22	48.66
Bra020360.1-P	Field mustard	cytosol	36.22	46.18
CDY32692	Canola	peroxisome	36.0	45.89
CDX74298	Canola	plastid	35.78	45.48
Bra001006.1-P	Field mustard	plastid	35.56	45.2
CDY02828	Canola	cytosol	35.56	45.2
KRH52088	Soybean	cytosol	32.67	44.95
GSMUA_Achr4P10960_001	Banana	endoplasmic reticulum	40.44	44.83
PGSC0003DMT400030161	Potato	cytosol	35.56	44.69
KRH05594	Soybean	cytosol	34.89	44.6
CDX91947	Canola	plastid	34.89	44.48
PGSC0003DMT400027542	Potato	cytosol	35.11	44.38
Solyc04g077850.2.1	Tomato	cytosol	35.11	44.38
AT3G01400.1	Thale cress	cytosol	34.89	44.23
GSMUA_Achr4P14130_001	Banana	cytosol	34.0	44.09
AT5G58680.1	Thale cress	cytosol	33.78	42.58
GSMUA_Achr7P26200_001	Banana	extracellular, golgi	38.22	41.55
VIT_18s0001g09130.t01	Wine grape	cytosol	34.44	39.95
GSMUA_Achr5P16030_001	Banana	cytosol	39.78	38.0
Zm00001d021951_P001	Maize	plastid	28.67	27.74
Zm00001d006705_P001	Maize	plastid	28.22	27.37
Zm00001d016501_P001	Maize	cytosol	18.89	18.28
Zm00001d045632_P004	Maize	cytosol, mitochondrion	22.67	16.19
Zm00001d000381_P001	Maize	cytosol	22.22	15.67
Zm00001d030732_P001	Maize	cytosol	22.22	15.04
Zm00001d041548_P002	Maize	cytosol	22.44	15.03
Zm00001d031263_P001	Maize	cytosol	20.22	14.11
Zm00001d028623_P001	Maize	cytosol	22.67	14.05
Zm00001d035040_P007	Maize	mitochondrion	26.89	13.88
Zm00001d042608_P002	Maize	cytosol	28.44	13.84
Zm00001d049708_P007	Maize	cytosol	26.22	13.38
Zm00001d014845_P001	Maize	cytosol	18.89	13.26
Zm00001d038471_P001	Maize	cytosol, plasma membrane, plastid	18.22	12.24
Zm00001d012494_P001	Maize	cytosol	17.11	11.61
Zm00001d043043_P001	Maize	cytosol	16.89	11.46
Zm00001d053544_P001	Maize	mitochondrion, plastid	17.56	11.21
Zm00001d016225_P001	Maize	plastid	17.56	10.84
Zm00001d050308_P001	Maize	mitochondrion, plasma membrane	15.78	10.23
Zm00001d020332_P001	Maize	cytosol	15.78	10.17

Protein Annotations

EnsemblPlants:Zm00001d003967_P001	EnsemblPlants:Zm00001d003967_T001	EnsemblPlantsGene:Zm00001d003967	Gene3D:1.25.10.10	GO:GO:0003674	GO:GO:0005488
GO:GO:0005515	InterPro:ARM-like	InterPro:ARM-type_fold	InterPro:Armadillo	InterPro:IPR000225	InterPro:IPR011989
PANTHER:PTHR23315	PANTHER:PTHR23315:SF64	PFAM:PF00514	PFscan:PS50176	ProteinID:ONM18093.1	SEG:seg
SMART:SM00185	SUPFAM:SSF48371	UniParc:UPI00084373CA	UniProt:A0A1D6ECR6	MapMan:35.1	:

Description

ARM repeat superfamily protein

Coordinates

chr2:+:72663143..72665832

Molecular Weight (calculated)

48292.8 Da

IEP (calculated)

6.678

GRAVY (calculated)

-0.146

Length

450 amino acids

Sequence
(BLAST)

001: MFFSKKGPYP FLLTTFTFPS PAKDDQNSPP TLSSRLLTTA DKSSPLPPLN LALPLVRLLS HADPLLQEHG VTALLNLSIC DENKATIVEA GAIRPLVHAL
101: KSAVSPAARE NAACVLLRLS QLDGASTAAI GRAGAIPLLV SLVETGGARG KKDAATALYA LCSGARENRQ RAVETGAVRP LLDLMADPES GMVDKAAYVL
201: HSLVSSSEGR AAAIEEGGIP VLVEMVEVGT SCQKEIATLS LLQIYEDNIV YRTMVAHEGA IPPLIALSQS SSARPKLKTK VHTTSQCPHS TKKRGVADRD
301: AAAAAESEPT HAASGSRCHS RPPGTTIPNT VYDPIRRDSL PLEEIKDVYL LDFVGPPGFV EDIAPKVERN KLLTEVSTLR GNESGKDVGE VKYVPDNKAE
401: TVHKLFKFIE DGDLWRWKIP NSKAFISGLK DLDIEFNVNA NNKLFDQGLD

Best Arabidopsis Sequence Match ( AT3G01400.1 )
(BLAST)

001: MEMENHRPGS FTYMGRKFSD LSLNDDSSAF SDCNSDRSGE FPTASSESRR LLLSCASENS DDLINHLVSH LDSSYSIDEQ KQAAMEIRLL SKNKPENRIK
101: IAKAGAIKPL ISLISSSDLQ LQEYGVTAIL NLSLCDENKE SIASSGAIKP LVRALKMGTP TAKENAACAL LRLSQIEENK VAIGRSGAIP LLVNLLETGG
201: FRAKKDASTA LYSLCSAKEN KIRAVQSGIM KPLVELMADF GSNMVDKSAF VMSLLMSVPE SKPAIVEEGG VPVLVEIVEV GTQRQKEMAV SILLQLCEES
301: VVYRTMVARE GAIPPLVALS QAGTSRAKQK AEALIELLRQ PRSISNGGAR SSSQL

Arabidopsis Description

ARM repeat superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q9SGH8]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.