Factsheet for Zm00001d045632_P004

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, cytosol

Predictor Summary:

cytosol 2
mitochondrion 3
plasma membrane 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, mitochondrion
Any Predictor:	cytosol, mitochondrion
MultiLoc:	cytosol
Predotar:	mitochondrion
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	plasma membrane
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
Zm00001d000396_P001
Zm00001d008875_P001
Zm00001d017475_P002
Zm00001d032310_P001
Zm00001d034028_P003
Zm00001d037616_P001
Zm00001d038809_P008
Zm00001d039427_P002
Zm00001d045632_P004

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT3G54850.1	Zm00001d034028_P003	AT1G04130.1	21798944
AT3G54850.1	Zm00001d017475_P002	AT3G48150.1	21798944
AT3G54850.1	Zm00001d045632_P004	AT3G54850.1	21798944
AT3G54850.1	Zm00001d037616_P001	AT4G39470.1	21798944
AT3G54850.1	Zm00001d000396_P001	AT5G58950.1	21798944
AT3G54850.1	Zm00001d008875_P001	AT5G58950.1	21798944
AT3G54850.1	Zm00001d032310_P001	AT5G58950.1	21798944
AT3G54850.1	Zm00001d038809_P008	AT5G58950.1	21798944
AT3G54850.1	Zm00001d039427_P002	AT5G58950.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EER87680	Sorghum	cytosol	91.11	95.51
TraesCS7A01G001900.1	Wheat	cytosol	69.84	83.02
Os06t0102700-01	Rice	plasma membrane	79.21	82.62
TraesCS7D01G001600.2	Wheat	cytosol, plastid	78.1	81.73
HORVU7Hr1G000780.1	Barley	cytosol	75.24	80.34
TraesCS4A01G498700.1	Wheat	plastid	76.19	75.83
KRH04403	Soybean	mitochondrion	36.83	64.09
VIT_13s0019g04710.t01	Wine grape	cytosol	59.68	59.87
PGSC0003DMT400019235	Potato	cytosol	57.3	57.85
Solyc11g008390.1.1	Tomato	cytosol	57.3	57.85
KRG91959	Soybean	cytosol	57.3	57.21
KRH34817	Soybean	cytosol	57.14	56.96
GSMUA_Achr3P00280_001	Banana	cytosol	53.81	56.22
CDX78273	Canola	cytosol	55.4	55.05
Bra007105.1-P	Field mustard	cytosol	55.08	54.73
GSMUA_Achr1P24290_001	Banana	cytosol	52.54	54.17
AT3G54850.1	Thale cress	cytosol	54.29	54.11
Zm00001d030732_P001	Maize	cytosol	50.0	47.37
Zm00001d041548_P002	Maize	cytosol	50.16	47.02
Zm00001d028623_P001	Maize	cytosol	49.68	43.11
Zm00001d000381_P001	Maize	cytosol	40.32	39.81
CDX73439	Canola	plastid	55.24	38.62
Zm00001d014845_P001	Maize	cytosol	38.25	37.6
Zm00001d031263_P001	Maize	cytosol	37.62	36.74
Zm00001d021978_P001	Maize	cytosol	20.48	35.64
Zm00001d016501_P001	Maize	cytosol	26.03	35.27
Zm00001d006726_P001	Maize	cytosol	19.84	34.72
Zm00001d021951_P001	Maize	plastid	20.79	28.17
Zm00001d053544_P001	Maize	mitochondrion, plastid	31.11	27.8
Zm00001d006705_P001	Maize	plastid	20.32	27.59
Zm00001d038471_P001	Maize	cytosol, plasma membrane, plastid	29.05	27.31
Zm00001d016225_P001	Maize	plastid	30.95	26.75
Zm00001d043043_P001	Maize	cytosol	28.1	26.7
Zm00001d012494_P001	Maize	cytosol	27.62	26.24
Zm00001d035040_P007	Maize	mitochondrion	36.19	26.15
Zm00001d049708_P007	Maize	cytosol	35.4	25.28
Zm00001d050308_P001	Maize	mitochondrion, plasma membrane	27.14	24.64
Zm00001d020332_P001	Maize	cytosol	26.51	23.93
Zm00001d042608_P002	Maize	cytosol	33.65	22.92
Zm00001d003967_P001	Maize	plastid	16.19	22.67

Protein Annotations

Gene3D:1.25.10.10	MapMan:19.2.2.1.5.2.1	Gene3D:3.30.40.10	ProteinID:AQL02851.1	InterPro:ARM-like	InterPro:ARM-type_fold
InterPro:Armadillo	ncoils:Coil	GO:GO:0003674	GO:GO:0003824	GO:GO:0004842	GO:GO:0005102
GO:GO:0005488	GO:GO:0005515	GO:GO:0006464	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987
GO:GO:0016567	GO:GO:0016740	GO:GO:0019538	GO:GO:0070696	InterPro:IPR000225	InterPro:IPR003613
InterPro:IPR011989	InterPro:IPR013083	UniProt:K7W7S8	PFAM:PF00514	PFAM:PF04564	PFscan:PS50176
PFscan:PS51698	PANTHER:PTHR23315	PANTHER:PTHR23315:SF111	SMART:SM00185	SMART:SM00504	SUPFAM:SSF48371
SUPFAM:SSF57850	UniParc:UPI0002211E78	InterPro:Ubox_domain	EnsemblPlantsGene:Zm00001d045632	EnsemblPlants:Zm00001d045632_P004	EnsemblPlants:Zm00001d045632_T004
InterPro:Znf_RING/FYVE/PHD	SEG:seg	:	:	:	:

Description

U-box domain-containing protein 14

Coordinates

chr9:+:29535352..29540388

Molecular Weight (calculated)

68164.1 Da

IEP (calculated)

6.890

GRAVY (calculated)

-0.164

Length

630 amino acids

Sequence
(BLAST)

001: MLARVAAEIA ALPEPRGPMR RLCGDLARRI RLLAPLLQHL QDRDLDDALR LADALGAARD LLRAVHDGSK IYQVRAVALL APQSNSIQPM NEHHHEPTNQ
101: AMQGDAVLQR FATVNSHIHL ALDALPYKTF DLPEEVLEQV DLVHSQFKRA ATTAAPPDAQ LSKDICFALA DKAFDPRVLT RISDKLQLHS MADIKKESLA
201: LHEMVISSGG EPDACVDEMS SLLKKLKDCV VTEAPTTETP NAQSTSIKHT SPIIPDEFRC PISLELMQDP VIVSSGQTYE RSGIQKWLDS GHKTCPKTQQ
301: LLSHTSLTPN FVLKSLIAQW CEANGIELPK NKANSRDKKA AKSSDYDHAG LVSLMNRLRS GSQDEQRAAA GEIRLLAKRN VNNRICIADA GAIPLLVNLL
401: SSTDPRTQEH AVTALLNLSI HENNKASIVS SHAIPKIVEV LKTGSMEARE NAAATLFSLS VVDENKVTIG GAGAIPPLIN LLCDGSPRGK KDAATAIFNL
501: CIYQGNKIRA VKAGIVIHLM NFLVDPTGGM IDEALTLLAI LAGNPEAKAV ISQSDPIPPL VEVIKTGSPR NRENAAAILW SLCCTDIDQT RAAKAAGAED
601: ALKELSDSGT ERAKRKASSI LELMRQAEEA

Best Arabidopsis Sequence Match ( AT3G54850.1 )
(BLAST)

001: MGLTNCCSHE ELMSRLVDSV KEISGFSSSR GFIGKIQGDL VRRITLLSPF FEELIDVNVE LKKDQITGFE AMRIALDSSL ELFRSVNGGS KLFQLFDRDS
101: LVEKFRDMTV EIEAALSQIP YEKIEVSEEV REQVQLLHFQ FKRAKERWEE SDLQLSHDLA MAENVMDPDP IILKRLSQEL QLTTIDELKK ESHAIHEYFL
201: SYDGDPDDCF ERMSSLLKNL VDFVTMESSD PDPSTGSRIV SRHRSPVIPE YFRCPISLEL MKDPVIVSTG QTYERSSIQK WLDAGHKTCP KSQETLLHAG
301: LTPNYVLKSL IALWCESNGI ELPQNQGSCR TTKIGGSSSS DCDRTFVLSL LEKLANGTTE QQRAAAGELR LLAKRNVDNR VCIAEAGAIP LLVELLSSPD
401: PRTQEHSVTA LLNLSINEGN KGAIVDAGAI TDIVEVLKNG SMEARENAAA TLFSLSVIDE NKVAIGAAGA IQALISLLEE GTRRGKKDAA TAIFNLCIYQ
501: GNKSRAVKGG IVDPLTRLLK DAGGGMVDEA LAILAILSTN QEGKTAIAEA ESIPVLVEII RTGSPRNREN AAAILWYLCI GNIERLNVAR EVGADVALKE
601: LTENGTDRAK RKAASLLELI QQTEGVAVTT VP

Arabidopsis Description

PUB14U-box domain-containing protein 14 [Source:UniProtKB/Swiss-Prot;Acc:Q8VZ40]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.