Factsheet for Zm00001d032310_P001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 2
mitochondrion 1
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
Zm00001d000402_P001
Zm00001d003996_P001
Zm00001d013859_P002
Zm00001d018961_P002
Zm00001d025208_P002
Zm00001d032464_P008
Zm00001d034443_P001

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G58950.1	Zm00001d000402_P001	AT3G11590.1	21798944
AT5G58950.1	Zm00001d003996_P001	AT3G11590.1	21798944
AT5G58950.1	Zm00001d025208_P002	AT3G11590.1	21798944
AT5G58950.1	Zm00001d018961_P002	AT3G22960.1	21798944
AT5G58950.1	Zm00001d034443_P001	AT3G22960.1	21798944
AT5G58950.1	Zm00001d013859_P002	AT4G39050.1	21798944
AT5G58950.1	Zm00001d032464_P008	AT4G39050.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
OQU80422	Sorghum	cytosol	89.8	86.2
TraesCS3D01G273200.1	Wheat	cytosol	69.73	69.38
TraesCS3A01G274000.1	Wheat	cytosol	69.4	69.05
Os01t0747400-01	Rice	cytosol	73.24	68.76
TraesCS3B01G307700.2	Wheat	cytosol	69.06	68.72
HORVU3Hr1G071240.2	Barley	cytosol	68.73	68.27
Zm00001d000396_P001	Maize	cytosol	57.36	58.33
GSMUA_Achr9P05820_001	Banana	cytosol	42.81	51.82
KRH21427	Soybean	cytosol	39.8	51.4
KRH10889	Soybean	cytosol	39.63	51.3
Zm00001d038809_P008	Maize	cytosol	56.19	50.6
CDX80321	Canola	cytosol	39.3	49.47
KRH50054	Soybean	cytosol, plastid	40.8	49.0
PGSC0003DMT400033356	Potato	cytosol, plastid	39.46	48.76
KRH20446	Soybean	cytosol, plastid	40.13	48.58
Solyc03g006400.2.1	Tomato	cytosol	38.96	48.54
CDX88676	Canola	cytosol, plastid	38.8	48.54
CDX71145	Canola	cytosol, plastid	38.46	48.52
GSMUA_Achr10P...	Banana	cytosol	45.48	48.48
PGSC0003DMT400076363	Potato	cytosol	40.3	47.82
CDY69707	Canola	cytosol, plastid	39.46	47.77
CDY32673	Canola	cytosol	38.29	47.71
Solyc02g078140.2.1	Tomato	cytosol	40.13	47.62
Bra002606.1-P	Field mustard	cytosol, plastid	39.3	47.57
Bra006738.1-P	Field mustard	cytosol, plastid	39.8	47.32
CDY02848	Canola	cytosol	37.29	46.36
KRH13893	Soybean	cytosol	25.42	46.34
KRH13899	Soybean	cytosol	25.42	46.34
CDY32674	Canola	cytosol, plastid	37.79	46.31
GSMUA_Achr4P30980_001	Banana	cytosol	44.48	46.1
AT5G58950.1	Thale cress	plastid	40.3	45.9
Bra020343.1-P	Field mustard	cytosol, plastid	39.13	45.7
GSMUA_Achr2P15610_001	Banana	cytosol	44.31	45.14
KRH43461	Soybean	cytosol	24.75	45.12
KRH27396	Soybean	cytosol	20.23	44.65
CDX99086	Canola	cytosol, plastid	33.11	44.49
CDX86103	Canola	cytosol	34.62	44.42
Bra018183.1-P	Field mustard	cytosol	34.45	42.21
AT3G46930.2	Thale cress	cytosol	35.95	41.75
Zm00001d040160_P001	Maize	cytosol	25.08	40.76
Zm00001d008875_P001	Maize	cytosol	37.79	40.29
Zm00001d039427_P002	Maize	cytosol	38.29	39.9
Zm00001d046643_P001	Maize	mitochondrion	23.91	36.11
Zm00001d036771_P001	Maize	cytosol, mitochondrion	24.25	35.89
GSMUA_Achr6P26170_001	Banana	cytosol	41.81	33.51
Zm00001d050947_P007	Maize	cytosol	19.06	32.29
Zm00001d024338_P006	Maize	cytosol	22.07	31.21
Zm00001d049361_P004	Maize	cytosol	21.91	30.97
Zm00001d002371_P001	Maize	cytosol	21.24	30.6
Zm00001d026267_P002	Maize	cytosol	21.07	30.36
Zm00001d053770_P001	Maize	cytosol	16.89	28.61
Zm00001d041918_P001	Maize	cytosol	19.57	22.29
Zm00001d015032_P003	Maize	cytosol	21.07	21.99
Zm00001d023510_P002	Maize	cytosol	20.07	21.62
Zm00001d021336_P004	Maize	cytosol, plastid	20.4	21.48
Zm00001d026677_P001	Maize	cytosol	20.07	21.35
Zm00001d021473_P002	Maize	cytosol	21.07	21.18
Zm00001d006267_P002	Maize	cytosol	21.4	20.81
Zm00001d053168_P001	Maize	cytosol	18.9	19.96
Zm00001d052763_P001	Maize	plastid	17.39	19.05

Protein Annotations

Gene3D:1.10.510.10	EntrezGene:100281480	MapMan:18.4.1.30	Gene3D:3.30.200.20	EMBL:BT064057	UniProt:C0P6Y8
GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004672	GO:GO:0005488	GO:GO:0005524
GO:GO:0006464	GO:GO:0006468	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016301
GO:GO:0016310	GO:GO:0016740	GO:GO:0019538	InterPro:IPR000719	InterPro:Kinase-like_dom_sf	ProteinID:ONM04814.1
PFAM:PF07714	PRINTS:PR00109	ScanProsite:PS00108	PFscan:PS50011	PANTHER:PTHR44581	PANTHER:PTHR44581:SF1
InterPro:Prot_kinase_dom	SMART:SM00220	SUPFAM:SSF56112	InterPro:Ser-Thr/Tyr_kinase_cat_dom	InterPro:Ser/Thr_kinase_AS	UniParc:UPI0001949060
EnsemblPlantsGene:Zm00001d032310	EnsemblPlants:Zm00001d032310_P001	EnsemblPlants:Zm00001d032310_T001	SEG:seg	:	:

Description

Protein kinase superfamily protein

Coordinates

chr1:-:221630345..221634888

Molecular Weight (calculated)

66087.7 Da

IEP (calculated)

9.461

GRAVY (calculated)

-0.482

Length

598 amino acids

Sequence
(BLAST)

001: MDDEDYSWVR RTRFSHSVVR SNSGREQFGA FVEQFNRGAA LRQKGSASGF KLHGLNMEPG TRLSTSSLPT TSSFCAQPKP KPKDMSSSDA KPGQHAKAVS
101: DRPSSQEASA RKEDDAKASN GKKGIGKLSV AVPRVPAVQS AEVESPGALE FSFHPDEQSL KLQRACSSPA PFPRKKTPGD DALTRSSSLS VLGEAPKTKQ
201: RARSPLPSRH VAEVFQEAKS ATKRFSTPPP PRRSASSLEL NGCPPAPVTV RAPGKLKNRK EGHANGRMKV AATALEVLEK WSVDRSQLLI GHRFASGAHS
301: RLFHGIYKEQ PVAVKFIRQP DDEEDAELAA QLEKQFHTEV ATLSRLNHPN VIKLVGACSS PPVFCVITEF LSGGSLRAFL HKLDHKALPL GKIISISLDI
401: ARGMSYIHSQ GVVHRDVKPE NIIFDDVFCA KIVDFGIACE EEYCDPLAND TGTFRWMAPE MMKHKAYGRK VDVYSFGLIL WEMFSGTIPY EELNPFQAAF
501: AVFDKNVRPA IPTSCPTPVR LLIEQCWASH PEKRPDFSQI VQILEKFKSV LDRDGTLDNM PSSICQETHD HKNWLAHWVQ RLKHSQPDLS GPPPPKLL

Best Arabidopsis Sequence Match ( AT1G62400.1 )
(BLAST)

001: MSGLCFNPFR LRWSLRSKLP LEPSLPNLPC NPSSSKTNRY AEAETMEKKR FDSMESWSMI LESENVETWE ASKGEREEWT ADLSQLFIGN KFASGAHSRI
101: YRGIYKQRAV AVKMVRIPTH KEETRAKLEQ QFKSEVALLS RLFHPNIVQF IAACKKPPVY CIITEYMSQG NLRMYLNKKE PYSLSIETVL RLALDISRGM
201: EYLHSQGVIH RDLKSNNLLL NDEMRVKVAD FGTSCLETQC REAKGNMGTY RWMAPEMIKE KPYTRKVDVY SFGIVLWELT TALLPFQGMT PVQAAFAVAE
301: KNERPPLPAS CQPALAHLIK RCWSENPSKR PDFSNIVAVL EKYDECVKEG LPLTSHASLT KTKKAILDHL KGCVTSISSP FSSSSVPVNA

Arabidopsis Description

HT1Serine/threonine-protein kinase HT1 [Source:UniProtKB/Swiss-Prot;Acc:Q2MHE4]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.