Factsheet for PGSC0003DMT400076363

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 1
cytosol 2
nucleus 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
ChloroP:	plastid
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
PGSC0003DMT400008772
PGSC0003DMT400072353

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G58950.1	PGSC0003DMT400072353	AT3G11590.1	21798944
AT5G58950.1	PGSC0003DMT400008772	AT4G39050.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc02g078140.2.1	Tomato	cytosol	97.42	97.42
PGSC0003DMT400033356	Potato	cytosol, plastid	74.21	77.27
KRH10889	Soybean	cytosol	64.88	70.78
KRH21427	Soybean	cytosol	64.48	70.19
KRH20446	Soybean	cytosol, plastid	66.47	67.81
KRH50054	Soybean	cytosol, plastid	66.67	67.47
CDX71145	Canola	cytosol, plastid	59.92	63.71
CDX88676	Canola	cytosol, plastid	59.92	63.18
CDY32673	Canola	cytosol	58.73	61.67
CDX80321	Canola	cytosol	57.94	61.47
Bra006738.1-P	Field mustard	cytosol, plastid	60.32	60.44
CDY02848	Canola	cytosol	57.54	60.29
CDY32674	Canola	cytosol, plastid	58.33	60.25
Bra002606.1-P	Field mustard	cytosol, plastid	58.73	59.92
CDY69707	Canola	cytosol, plastid	58.73	59.92
AT5G58950.1	Thale cress	plastid	60.52	58.1
Bra020343.1-P	Field mustard	cytosol, plastid	58.93	58.01
GSMUA_Achr9P05820_001	Banana	cytosol	54.56	55.67
KRH13893	Soybean	cytosol	34.92	53.66
KRH13899	Soybean	cytosol	34.92	53.66
KRH43461	Soybean	cytosol	34.33	52.74
CDX99086	Canola	cytosol, plastid	46.03	52.13
KRH27396	Soybean	cytosol	27.98	52.03
CDX86103	Canola	cytosol	47.62	51.5
GSMUA_Achr10P...	Banana	cytosol	56.75	50.98
OQU87530	Sorghum	cytosol	38.1	50.66
AT3G46930.2	Thale cress	cytosol	51.59	50.49
Bra018183.1-P	Field mustard	cytosol	48.61	50.2
GSMUA_Achr4P30980_001	Banana	cytosol	56.94	49.74
GSMUA_Achr2P15610_001	Banana	cytosol	57.34	49.23
PGSC0003DMT400062959	Potato	cytosol, mitochondrion	30.95	44.44
PGSC0003DMT400060698	Potato	cytosol	29.76	44.12
PGSC0003DMT400034519	Potato	cytosol	29.17	43.49
Os01t0201200-01	Rice	nucleus	47.82	42.81
TraesCS3D01G140700.1	Wheat	cytosol	47.02	42.32
TraesCS3B01G158300.1	Wheat	nucleus	46.83	42.14
KXG31606	Sorghum	cytosol	47.82	42.13
TraesCS3A01G313600.1	Wheat	cytosol	46.63	41.96
Zm00001d008875_P001	Maize	cytosol	46.03	41.35
TraesCS3A01G274000.1	Wheat	cytosol	48.81	40.93
Zm00001d039427_P002	Maize	cytosol	46.23	40.59
HORVU3Hr1G071240.2	Barley	cytosol	48.41	40.53
TraesCS3D01G273200.1	Wheat	cytosol	48.21	40.43
TraesCS3B01G307700.2	Wheat	cytosol	48.21	40.43
Zm00001d032310_P001	Maize	cytosol	47.82	40.3
KXG22364	Sorghum	cytosol	48.21	39.97
Zm00001d000396_P001	Maize	cytosol	46.03	39.46
OQU80422	Sorghum	cytosol	48.61	39.33
HORVU3Hr1G026870.1	Barley	cytosol	44.84	39.24
Os05t0519200-02	Rice	cytosol	46.63	38.91
Os01t0747400-01	Rice	cytosol	48.61	38.46
TraesCS1B01G351900.1	Wheat	nucleus	45.24	38.13
PGSC0003DMT400007577	Potato	cytosol	27.98	38.01
TraesCS1D01G341600.1	Wheat	nucleus	45.04	37.96
TraesCS1A01G339600.1	Wheat	cytosol	45.04	37.83
PGSC0003DMT400007578	Potato	cytosol	29.56	37.25
HORVU1Hr1G076110.1	Barley	nucleus	44.25	37.1
Zm00001d038809_P008	Maize	cytosol	48.02	36.45
PGSC0003DMT400022377	Potato	cytosol	23.02	35.91
GSMUA_Achr6P26170_001	Banana	cytosol	52.78	35.66
PGSC0003DMT400032824	Potato	cytosol	24.01	34.28
PGSC0003DMT400032959	Potato	cytosol	22.42	30.38
PGSC0003DMT400007574	Potato	cytosol	18.25	29.58
PGSC0003DMT400047982	Potato	cytosol	28.97	25.89
PGSC0003DMT400048730	Potato	cytosol	28.57	25.62

Protein Annotations

Gene3D:1.10.510.10	EntrezGene:102588783	MapMan:18.4.1.30	Gene3D:3.30.200.20	GO:GO:0000166	GO:GO:0003674
GO:GO:0003824	GO:GO:0004672	GO:GO:0005488	GO:GO:0005524	GO:GO:0006464	GO:GO:0006468
GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016301	GO:GO:0016740	GO:GO:0019538
InterPro:IPR000719	InterPro:Kinase-like_dom_sf	UniProt:M1CWL5	PFAM:PF07714	EnsemblPlantsGene:PGSC0003DMG400029693	PGSC:PGSC0003DMG400029693
EnsemblPlants:PGSC0003DMT400076363	PIRSF:PIRSF000615	PRINTS:PR00109	ScanProsite:PS00108	PFscan:PS50011	PANTHER:PTHR44581
PANTHER:PTHR44581:SF2	InterPro:Prot_kinase_dom	SMART:SM00220	SUPFAM:SSF56112	InterPro:Ser-Thr/Tyr_kinase_cat_dom	InterPro:Ser/Thr_kinase_AS
UniParc:UPI000294CB6F	RefSeq:XP_006347030.1	RefSeq:XP_006347031.1	:	:	:

Description

Protein kinase (PK) [Source:PGSC_GENE;Acc:PGSC0003DMG400029693]

Coordinates

chr2:-:33903937..33907194

Molecular Weight (calculated)

57318.0 Da

IEP (calculated)

9.795

GRAVY (calculated)

-0.488

Length

504 amino acids

Sequence
(BLAST)

001: MDDEVNSWIR RTKFSHTVCH RLDSARLTSI PISTIQSGRI AGAKTRPGTG SFNSRPEPTV APLQRNPTTN KHRTVSPHPE TSVPDTFKEA RSSQKRFSTP
101: RPQRKEHEKK IVSKSFYKDS RESKSPMLRS PGSRSPSNTS PLRHFTSFKF HDKSKSRKDS AWSRYFDHGV GRVSSVETAD EYTIDLSKLF LGLRFAHGAH
201: SQLYHGKYKD EAVAVKIIRV PDDDEIGALG IRLENQFIRE VTLLSRLHHP NIIKFVGACK QPPVFCVVTE YISEGSLRAH LHKLEHKSLA LNKLIALAMD
301: IALGMEYIHS QGIIHRDLKP ENILIDEDFH PKIADFGIAC EEAYCDLLVD DPGTYRWMAP EMIKRKSYGR KVDVYGFGLI LWEMVSGTIP YEDMTPVQAA
401: FAVVNKNMRP PIHGDCPPAM RALIELCWAL QPDKRPEFWQ IVKVLEQFES SVARDGTLNL VQKTMCLDHK KGLHHWIQKL GHVHQNASLH QNILSMPMPK
501: PKFA

Best Arabidopsis Sequence Match ( AT5G58950.1 )
(BLAST)

001: MDEEATSWIR RAKFSQTVSY RLNSSKLASL PFMINQDKFS GLKAIPQRSS SSSSASSSDP KLVSSNSQTT GDTSSLEAAD VYVVDSEIQT NPVTHKQRSV
101: SPSPQMAVPD VFKEARSERK RFSTPHPRRV ESEKGMKPKL SHKNSFDKRS FNLRSPSGPI RDLGTLRIQE RVKSKKDTGW SKLFDNTGRR VSAVEASEEF
201: RVDMSKLFFG LKFAHGLYSR LYHGKYEDKA VAVKLITVPD DDDNGCLGAR LEKQFTKEVT LLSRLTHPNV IKFVGAYKDP PVYCVLTQYL PEGSLRSFLH
301: KPENRSLPLK KLIEFAIDIA RGMEYIHSRR IIHRDLKPEN VLIDEEFHLK IADFGIACEE EYCDMLADDP GTYRWMAPEM IKRKPHGRKA DVYSFGLVLW
401: EMVAGAIPYE DMNPIQAAFA VVHKNIRPAI PGDCPVAMKA LIEQCWSVAP DKRPEFWQIV KVLEQFAISL EREGNLNLSS SKICKDPRKG LKHWIQKLGP
501: VHAGGGGGSS SSGLGGSALP KPKFA

Arabidopsis Description

At5g58950 [Source:UniProtKB/TrEMBL;Acc:Q9FIL6]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.