Factsheet for PGSC0003DMT400032959

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc02g085620.2.1	Tomato	cytosol	95.97	96.23
VIT_04s0023g01350.t01	Wine grape	cytosol	40.32	71.09
CDX81373	Canola	cytosol	49.46	46.46
Bra037152.1-P	Field mustard	cytosol	48.92	45.96
CDY57129	Canola	cytosol	48.92	45.96
CDY53853	Canola	cytosol	48.39	45.23
Bra012094.1-P	Field mustard	cytosol, nucleus, plastid	48.39	44.89
CDY30760	Canola	cytosol	47.85	44.72
AT5G66710.1	Thale cress	cytosol	48.66	44.69
PGSC0003DMT400032824	Potato	cytosol	41.13	43.34
AT3G50720.1	Thale cress	cytosol	43.82	43.24
AT3G50730.1	Thale cress	cytosol	41.94	42.05
KRH08313	Soybean	cytosol	40.86	38.29
PGSC0003DMT400022377	Potato	cytosol	27.69	31.89
PGSC0003DMT400060698	Potato	cytosol	28.76	31.47
PGSC0003DMT400062959	Potato	cytosol, mitochondrion	29.57	31.34
PGSC0003DMT400034519	Potato	cytosol	27.69	30.47
PGSC0003DMT400007577	Potato	cytosol	28.23	28.3
PGSC0003DMT400007578	Potato	cytosol	29.57	27.5
PGSC0003DMT400033356	Potato	cytosol, plastid	29.84	22.93
PGSC0003DMT400076363	Potato	cytosol	30.38	22.42
PGSC0003DMT400007574	Potato	cytosol	17.74	21.22
PGSC0003DMT400047982	Potato	cytosol	31.99	21.1
PGSC0003DMT400048730	Potato	cytosol	30.91	20.46

Protein Annotations

Gene3D:1.10.510.10	EntrezGene:102583819	MapMan:18.4.1.30	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824
GO:GO:0004672	GO:GO:0005488	GO:GO:0005524	GO:GO:0006464	GO:GO:0006468	GO:GO:0008150
GO:GO:0008152	GO:GO:0009987	GO:GO:0016301	GO:GO:0016740	GO:GO:0019538	InterPro:IPR000719
InterPro:Kinase-like_dom_sf	UniProt:M1AYD5	PFAM:PF07714	EnsemblPlantsGene:PGSC0003DMG400012659	PGSC:PGSC0003DMG400012659	EnsemblPlants:PGSC0003DMT400032959
PIRSF:PIRSF000654	PRINTS:PR00109	ScanProsite:PS00108	PFscan:PS50011	PANTHER:PTHR23257	PANTHER:PTHR23257:SF611
InterPro:Prot_kinase_dom	SMART:SM00220	SUPFAM:SSF56112	InterPro:Ser-Thr/Tyr_kinase_cat_dom	InterPro:Ser/Thr_kinase_AS	UniParc:UPI000296E21D
RefSeq:XP_006363141.1	:	:	:	:	:

Description

Serine/threonine-protein kinase HT1 [Source:PGSC_GENE;Acc:PGSC0003DMG400012659]

Coordinates

chr2:-:40842380..40849023

Molecular Weight (calculated)

41825.4 Da

IEP (calculated)

5.463

GRAVY (calculated)

-0.201

Length

372 amino acids

Sequence
(BLAST)

001: MVDTKDFINL ERSLSNPFGN FSDGSAIDDD FSAQNSVSID KKLLIDLQHL SIGHVISEGP YSVVYEGLYK SMPVAIKIIQ PDMSANVSPE RKVKFQREVT
101: LLSKVKHENI VKFIGASMEP TLMLVTELMR GGTLQKFLWS TRPQCPDLKL SLSFALGISR AMEYLHAIGI IHRDLKPSNL LLTEDKTIIK LADFGLARED
201: AEAEMTTEAG TYRWMAPEMF SMDPIRIGVK KYYNHKVDVY SFSMILWELL TNSTPFKGRS NIMVAYATAT KMRPSMDNIP SEIEPLLSSC WAEDPAERPE
301: FEQISDFLAN ILRNVCGSLT CSPNLFETEH PTGNELVNSP VTNCLMDKDA ENSKKKHRSS CCCFMSAYDN SL

Best Arabidopsis Sequence Match ( AT5G66710.1 )
(BLAST)

001: MRPRGYQRAP SMQKPTDYPT DKTLHPNYPF LMSSHGLKSF ESDDEDDDSD SSNDQFAFTI NTELLVDVKD ISIGDFIGEG SSSTVYRGLF RRVVPVSVKI
101: FQPKRTSALS IEQRKKFQRE VLLLSKFRHE NIVRFIGACI EPKLMIITEL MEGNTLQKFM LSVRPKPLDL KLSISFALDI ARGMEFLNAN GIIHRDLKPS
201: NMLLTGDQKH VKLADFGLAR EETKGFMTFE AGTYRWMAPE LFSYDTLEIG EKKHYDHKVD VYSFAIVFWE LLTNKTPFKG KNNIFVAYAA SKNQRPSVEN
301: LPEGVVSILQ SCWAENPDAR PEFKEITYSL TNLLRSLSSD TDATSSNSKA NIATEDSTSS LVQERVVCDC PGLKMSKTKK LKKKTNKLMN MIVPFLKIFK
401: SCMSK

Arabidopsis Description

Protein kinase ATN1-like protein [Source:UniProtKB/TrEMBL;Acc:Q9LVQ9]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.