Factsheet for VIT_04s0023g01350.t01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 5
nucleus 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	cytosol
EpiLoc:	cytosol
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400032959	Potato	cytosol	71.09	40.32
Solyc02g085620.2.1	Tomato	cytosol	69.67	39.62
VIT_08s0058g01180.t01	Wine grape	cytosol	57.82	36.2
AT5G66710.1	Thale cress	cytosol	65.4	34.07
Bra037152.1-P	Field mustard	cytosol	63.51	33.84
CDX81373	Canola	cytosol	63.51	33.84
CDY57129	Canola	cytosol	63.51	33.84
VIT_14s0066g00370.t01	Wine grape	cytosol	55.92	33.52
AT3G50720.1	Thale cress	cytosol	59.72	33.42
VIT_17s0000g09290.t01	Wine grape	cytosol	54.5	32.67
CDY30760	Canola	cytosol	61.61	32.66
Bra012094.1-P	Field mustard	cytosol, nucleus, plastid	60.19	31.67
CDY53853	Canola	cytosol	59.72	31.66
VIT_00s0684g00010.t01	Wine grape	mitochondrion	34.6	31.6
AT3G50730.1	Thale cress	cytosol	55.45	31.54
KRH08313	Soybean	cytosol	52.61	27.96
VIT_17s0000g08240.t01	Wine grape	cytosol	40.28	23.74
VIT_04s0008g03020.t01	Wine grape	cytosol	42.65	21.58
VIT_11s0065g00140.t01	Wine grape	cytosol	41.23	21.22
VIT_18s0001g00720.t01	Wine grape	cytosol	39.81	16.09
VIT_18s0166g00290.t01	Wine grape	cytosol	38.39	14.73
VIT_03s0038g03040.t01	Wine grape	cytosol	39.81	14.48
VIT_00s1430g00010.t01	Wine grape	nucleus	0.0	0.0

Protein Annotations

Gene3D:1.10.510.10	EntrezGene:100246176	wikigene:100246176	MapMan:18.4.1.30	EMBL:AM482703	ProteinID:CAN83950
ProteinID:CAN83950.1	ProteinID:CCB44474	ProteinID:CCB44474.1	UniProt:F6GWY8	EMBL:FN594959	GO:GO:0000166
GO:GO:0003674	GO:GO:0003824	GO:GO:0004672	GO:GO:0004871	GO:GO:0005488	GO:GO:0005524
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0006464	GO:GO:0006468
GO:GO:0007154	GO:GO:0007165	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016301
GO:GO:0016740	GO:GO:0019538	GO:GO:0035556	InterPro:IPR000719	InterPro:Kinase-like_dom_sf	EntrezGene:LOC100246176
wikigene:LOC100246176	PFAM:PF07714	ScanProsite:PS00108	PFscan:PS50011	PANTHER:PTHR23257	PANTHER:PTHR23257:SF611
InterPro:Prot_kinase_dom	SMART:SM00220	SUPFAM:SSF56112	InterPro:Ser-Thr/Tyr_kinase_cat_dom	InterPro:Ser/Thr_kinase_AS	UniParc:UPI0002109CFC
ArrayExpress:VIT_04s0023g01350	EnsemblPlantsGene:VIT_04s0023g01350	EnsemblPlants:VIT_04s0023g01350.t01	RefSeq:XP_002268484	RefSeq:XP_002268484.1	:

Description

No Description!

Coordinates

chr4:+:17821355..17824440

Molecular Weight (calculated)

23834.2 Da

IEP (calculated)

9.736

GRAVY (calculated)

-0.199

Length

211 amino acids

Sequence
(BLAST)

001: MPVAIKMIQP NKTSAVSPDR KEKFQREVTI LSRVKHENIV KFIGASIEPT MMIITELMKG GTLQQYLWSI RPNSPDLKLS LSFALDISRV MEYLHANGII
101: HRDLKPSNLL LTEDKKQIKV CDFGLAREET AGDMTTEAGT YRWMAPELFS TVPLPRGAKI HYDHKVDVYS FAIILWELLT NRTPFKGVQS ILIAYAAANR
201: TCTTTPKGDK P

Best Arabidopsis Sequence Match ( AT5G66710.1 )
(BLAST)

001: MRPRGYQRAP SMQKPTDYPT DKTLHPNYPF LMSSHGLKSF ESDDEDDDSD SSNDQFAFTI NTELLVDVKD ISIGDFIGEG SSSTVYRGLF RRVVPVSVKI
101: FQPKRTSALS IEQRKKFQRE VLLLSKFRHE NIVRFIGACI EPKLMIITEL MEGNTLQKFM LSVRPKPLDL KLSISFALDI ARGMEFLNAN GIIHRDLKPS
201: NMLLTGDQKH VKLADFGLAR EETKGFMTFE AGTYRWMAPE LFSYDTLEIG EKKHYDHKVD VYSFAIVFWE LLTNKTPFKG KNNIFVAYAA SKNQRPSVEN
301: LPEGVVSILQ SCWAENPDAR PEFKEITYSL TNLLRSLSSD TDATSSNSKA NIATEDSTSS LVQERVVCDC PGLKMSKTKK LKKKTNKLMN MIVPFLKIFK
401: SCMSK

Arabidopsis Description

Protein kinase ATN1-like protein [Source:UniProtKB/TrEMBL;Acc:Q9LVQ9]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.