Factsheet for VIT_18s0166g00290.t01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc04g071120.2.1	Tomato	cytosol	73.45	74.68
KRG91637	Soybean	cytosol	73.27	72.35
KRH35162	Soybean	cytosol	75.64	71.36
GSMUA_Achr6P25310_001	Banana	cytosol	64.73	68.2
HORVU5Hr1G040040.6	Barley	cytosol	55.82	67.18
GSMUA_Achr9P08830_001	Banana	cytosol	64.0	66.92
Os12t0163800-01	Rice	cytosol	63.09	65.1
Zm00001d041918_P001	Maize	cytosol	61.82	64.76
TraesCS5B01G124400.1	Wheat	cytosol	62.0	64.71
TraesCS5A01G124800.3	Wheat	cytosol	61.82	64.52
TraesCS5D01G132600.2	Wheat	cytosol	61.82	64.52
EES16697	Sorghum	cytosol	62.0	64.1
Os07t0203925-00	Rice	cytosol	26.55	62.39
Zm00001d023510_P002	Maize	cytosol	61.45	60.9
VIT_00s0684g00010.t01	Wine grape	mitochondrion	25.45	60.61
GSMUA_Achr7P03190_001	Banana	cytosol	64.36	60.2
KXG27800	Sorghum	cytosol	55.82	57.06
Zm00001d053168_P001	Maize	cytosol	55.64	54.06
VIT_18s0001g00720.t01	Wine grape	cytosol	46.91	49.43
VIT_03s0038g03040.t01	Wine grape	cytosol	51.82	49.14
VIT_00s1430g00010.t01	Wine grape	nucleus	17.45	41.38
VIT_04s0023g01350.t01	Wine grape	cytosol	14.73	38.39
VIT_04s0008g03020.t01	Wine grape	cytosol	27.45	36.21
VIT_11s0065g00140.t01	Wine grape	cytosol	26.18	35.12
VIT_08s0058g01180.t01	Wine grape	cytosol	21.09	34.42
VIT_17s0000g08240.t01	Wine grape	cytosol	22.36	34.36
VIT_14s0066g00370.t01	Wine grape	cytosol	21.27	33.24
VIT_17s0000g09290.t01	Wine grape	cytosol	20.73	32.39

Protein Annotations

Gene3D:1.10.510.10	EntrezGene:100246204	wikigene:100246204	MapMan:18.4.1.30	Gene3D:3.30.200.20	InterPro:ACT_dom
ProteinID:CBI35506	ProteinID:CBI35506.3	ncoils:Coil	UniProt:D7TYD1	EMBL:FN596264	GO:GO:0000166
GO:GO:0003674	GO:GO:0003824	GO:GO:0004672	GO:GO:0004674	GO:GO:0004871	GO:GO:0005488
GO:GO:0005524	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005829
GO:GO:0006464	GO:GO:0006468	GO:GO:0007154	GO:GO:0007165	GO:GO:0008150	GO:GO:0008152
GO:GO:0009987	GO:GO:0016301	GO:GO:0016740	GO:GO:0019538	GO:GO:0035556	InterPro:IPR000719
InterPro:IPR002912	InterPro:Kinase-like_dom_sf	EntrezGene:LOC100246204	wikigene:LOC100246204	PFAM:PF07714	PRINTS:PR00109
ScanProsite:PS00108	PFscan:PS50011	PFscan:PS51671	PANTHER:PTHR44012	PANTHER:PTHR44012:SF2	InterPro:Prot_kinase_dom
SMART:SM00220	SUPFAM:SSF55021	SUPFAM:SSF56112	InterPro:Ser-Thr/Tyr_kinase_cat_dom	InterPro:Ser/Thr_kinase_AS	UniParc:UPI0001BE4128
ArrayExpress:VIT_18s0166g00290	EnsemblPlantsGene:VIT_18s0166g00290	EnsemblPlants:VIT_18s0166g00290.t01	RefSeq:XP_002264745	RefSeq:XP_002264745.2	SEG:seg

Description

No Description!

Coordinates

chr18:-:14296029..14329589

Molecular Weight (calculated)

61812.1 Da

IEP (calculated)

4.865

GRAVY (calculated)

-0.397

Length

550 amino acids

Sequence
(BLAST)

001: MDLIEGVGES SSPPRSFGCF GVYDVRNDVY NRLMESGNEE AVSNPEFREQ LDAHFNRLPP SYGLDVNIDR VDDVLLHQKL LALAKEPDKR PVYHVRFLEN
101: LSTKVDGNDD QQSMSVLSTA RPCCNADNEG VVPSHNRNEI DFEPCSKLED LNLDVKKDST DMERRCLMEN SSRRQETSNV PIHEVIFSTI DKPKLLSQLS
201: ALLSDIGLNI REAHVFSTID GYSLDVFVVD GWPVEDTDGL SEAMEKAIAR SEGSWSGSSH SHSAVEKALA AQVKSGDWEI DRRLLKIGER IASGSCGDLY
301: RGVYLGQDVA VKILRSEHLN ESLEDEFEQE VAILREVQHR NVVRFIGACT RSPHLCIVTE YMPGGSLYDY LHKNHNVLKL PQLLKFAIDV CKGMGYLHQN
401: NIIHRDLKTA NLLMDTHNVV KVADFGVARF QNQEGVMTAE TGTYRWMAPE VINHLPYDQK ADVFSFAIVL WELTTAKIPY DNMTPLQAAL GVRQGLRPDL
501: PENTHPKLVD MMQRCWEAVP GNRPSFSEIT VELEELLQEV QGTSRASNGN

Best Arabidopsis Sequence Match ( AT4G35780.1 )
(BLAST)

001: MAIKEETEES CGSRAVVASI TKESPRQHRM KLEVYGEVLQ RIQESNYEEA NFPGFDDLLW LHFNRLPARY ALDVNVERAE DVLTHQRLLK LAEDPATRPV
101: FEVRCVQVSP TLNGNSGDVD PSDPAVNEDA QSSYNSRSLA PPTFGSSPNF EALTQAYKDH AQDDDSAVNA QLPNSRPMHE ITFSTIDRPK LLSQLTSMLG
201: ELGLNIQEAH AFSTADGFSL DVFVVDGWSQ EETEGLKDAL KKEIRKFKDQ PCSKQKSITF FEHDKSTNEL LPACVEIPTD GTDEWEIDMK QLKIEKKVAC
301: GSYGELFRGT YCSQEVAIKI LKPERVNAEM LREFSQEVYI MRKVRHKNVV QFIGACTRSP NLCIVTEFMT RGSIYDFLHK HKGVFKIQSL LKVALDVSKG
401: MNYLHQNNII HRDLKTANLL MDEHEVVKVA DFGVARVQTE SGVMTAETGT YRWMAPEVIE HKPYDHRADV FSYAIVLWEL LTGELPYSYL TPLQAAVGVV
501: QKGLRPKIPK ETHPKLTELL EKCWQQDPAL RPNFAEIIEM LNQLIREVGD DERHKDKHGG YFSGLKKGHR

Arabidopsis Description

STY17Serine/threonine-protein kinase STY17 [Source:UniProtKB/Swiss-Prot;Acc:Q8RWL6]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.