Factsheet for VIT_00s1430g00010.t01

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
cytosol 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_03s0038g03040.t01	Wine grape	cytosol	65.52	26.21
VIT_18s0001g00720.t01	Wine grape	cytosol	46.12	20.5
VIT_18s0166g00290.t01	Wine grape	cytosol	41.38	17.45
VIT_04s0008g03020.t01	Wine grape	cytosol	8.19	4.56
VIT_11s0065g00140.t01	Wine grape	cytosol	6.9	3.9
VIT_17s0000g08240.t01	Wine grape	cytosol	2.16	1.4
VIT_17s0000g09290.t01	Wine grape	cytosol	1.29	0.85
VIT_14s0066g00370.t01	Wine grape	cytosol	0.86	0.57
VIT_00s0684g00010.t01	Wine grape	mitochondrion	0.0	0.0
VIT_04s0023g01350.t01	Wine grape	cytosol	0.0	0.0
VIT_08s0058g01180.t01	Wine grape	cytosol	0.0	0.0

Protein Annotations

EntrezGene:100253172	wikigene:100253172	MapMan:35.1	InterPro:ACT_dom	EMBL:AM427449	ProteinID:CAN77952
ProteinID:CAN77952.1	ProteinID:CBI14838	ProteinID:CBI14838.3	UniProt:D7U6Y2	EMBL:FN596577	GO:GO:0000166
GO:GO:0003674	GO:GO:0003824	GO:GO:0004672	GO:GO:0005488	GO:GO:0005524	GO:GO:0006464
GO:GO:0006468	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016301	GO:GO:0016740
GO:GO:0019538	InterPro:IPR002912	EntrezGene:LOC100253172	wikigene:LOC100253172	PFAM:PF01842	PFscan:PS51671
PANTHER:PTHR44012	PANTHER:PTHR44012:SF1	SUPFAM:SSF55021	UniParc:UPI0001BE4C51	ArrayExpress:VIT_00s1430g00010	EnsemblPlantsGene:VIT_00s1430g00010
EnsemblPlants:VIT_00s1430g00010.t01	RefSeq:XP_002263102	RefSeq:XP_002263102.2	:	:	:

Description

No Description!

Coordinates

chrUn:+:39135284..39138998

Molecular Weight (calculated)

26237.5 Da

IEP (calculated)

4.638

GRAVY (calculated)

-0.474

Length

232 amino acids

Sequence
(BLAST)

001: MAMDDTESCS SRAVDSSHAQ PRHHRQKLEV FNEVLRRIQE SDCEEAKLPD FDDQLWLHFN RLPARYVLDV NVERAEDVLT HQRLLHLAED PANRPVFEVR
101: LVQVHSASYE DSVDSAYSKS PMKEDPQSYS NYSSRQGIHP PPTFGSSPNL EVLALQVNRI QVEEGDSTVN STSALVRTMH EITFSTVDKP KLLSQLTSIL
201: AEVGLNIQEA HAFSTVDGFS LDVFVVDGWP YE

Best Arabidopsis Sequence Match ( AT2G17700.1 )
(BLAST)

001: MTIKDESESC GSRAVVASPS QENPRHYRMK LDVYSEVLQR LQESNYEEAT LPDFEDQLWL HFNRLPARYA LDVKVERAED VLTHQRLLKL AADPATRPVF
101: EVRSVQVSPR ISADSDPAVE EDAQSSHQPS GPGVLAPPTF GSSPNFEAIT QGSKIVEDVD SVVNATLSTR PMHEITFSTI DKPKLLSQLT SLLGELGLNI
201: QEAHAFSTVD GFSLDVFVVD GWSQEETDGL RDALSKEILK LKDQPGSKQK SISFFEHDKS SNELIPACIE IPTDGTDEWE IDVTQLKIEK KVASGSYGDL
301: HRGTYCSQEV AIKFLKPDRV NNEMLREFSQ EVFIMRKVRH KNVVQFLGAC TRSPTLCIVT EFMARGSIYD FLHKQKCAFK LQTLLKVALD VAKGMSYLHQ
401: NNIIHRDLKT ANLLMDEHGL VKVADFGVAR VQIESGVMTA ETGTYRWMAP EVIEHKPYNH KADVFSYAIV LWELLTGDIP YAFLTPLQAA VGVVQKGLRP
501: KIPKKTHPKV KGLLERCWHQ DPEQRPLFEE IIEMLQQIMK EVNVVV

Arabidopsis Description

STY8Serine/threonine-protein kinase STY8 [Source:UniProtKB/Swiss-Prot;Acc:O22558]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.