Factsheet for VIT_14s0066g00370.t01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
VIT_05s0020g04420.t01
VIT_06s0009g01910.t01
VIT_08s0040g00470.t01

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G40540.1	VIT_06s0009g01910.t01	AT2G41100.1	17360592
AT5G40540.1	VIT_08s0040g00470.t01	AT2G41100.1	17360592
AT5G40540.1	VIT_05s0020g04420.t01	AT4G14640.1	17360592

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc02g093410.2.1	Tomato	cytosol	89.77	89.52
PGSC0003DMT400032824	Potato	cytosol	89.49	89.24
VIT_17s0000g09290.t01	Wine grape	cytosol	87.78	87.78
KRG93193	Soybean	cytosol	76.7	86.82
KRH56528	Soybean	cytosol	84.38	85.84
KRG94025	Soybean	cytosol	83.81	84.77
KRH07131	Soybean	cytosol	83.52	84.24
GSMUA_Achr6P06670_001	Banana	cytosol	81.53	81.53
Bra025563.1-P	Field mustard	cytosol	80.68	81.38
CDY36362	Canola	cytosol	80.4	81.09
KXG27334	Sorghum	cytosol	78.69	80.76
AT5G40540.1	Thale cress	cytosol	80.97	80.74
CDY42570	Canola	cytosol	79.83	80.52
Os02t0594100-01	Rice	cytosol	80.4	80.4
Zm00001d050947_P007	Maize	cytosol	80.11	79.89
TraesCS6D01G192100.1	Wheat	cytosol	79.26	79.71
TraesCS6A01G208500.1	Wheat	cytosol	79.26	79.71
AT3G27560.1	Thale cress	cytosol	80.4	79.49
HORVU6Hr1G053310.1	Barley	cytosol	79.26	79.26
CDY13723	Canola	cytosol	79.83	78.93
Bra025286.1-P	Field mustard	cytosol	79.83	78.93
TraesCS6B01G237600.2	Wheat	cytosol	79.26	78.81
GSMUA_Achr9P01860_001	Banana	cytosol	78.41	78.63
EES05353	Sorghum	cytosol	78.12	78.12
GSMUA_AchrUn_...	Banana	cytosol	46.59	77.0
GSMUA_AchrUn_...	Banana	cytosol	33.81	76.28
CDX83708	Canola	cytosol	78.41	75.82
VIT_08s0058g01180.t01	Wine grape	cytosol	59.94	62.61
VIT_04s0023g01350.t01	Wine grape	cytosol	33.52	55.92
VIT_00s0684g00010.t01	Wine grape	mitochondrion	24.72	37.66
VIT_17s0000g08240.t01	Wine grape	cytosol	33.24	32.68
VIT_04s0008g03020.t01	Wine grape	cytosol	36.08	30.46
VIT_11s0065g00140.t01	Wine grape	cytosol	35.23	30.24
VIT_18s0166g00290.t01	Wine grape	cytosol	33.24	21.27
VIT_18s0001g00720.t01	Wine grape	cytosol	30.4	20.5
VIT_03s0038g03040.t01	Wine grape	cytosol	32.67	19.83
VIT_00s1430g00010.t01	Wine grape	nucleus	0.57	0.86

Protein Annotations

Gene3D:1.10.510.10	EntrezGene:100254246	wikigene:100254246	MapMan:18.4.1.30	Gene3D:3.30.200.20	ProteinID:CBI34850
ProteinID:CBI34850.3	UniProt:D7TWH5	EMBL:FN596252	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824
GO:GO:0004672	GO:GO:0004674	GO:GO:0004871	GO:GO:0005488	GO:GO:0005524	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0006464	GO:GO:0006468	GO:GO:0007154	GO:GO:0007165
GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016301	GO:GO:0016740	GO:GO:0019538
GO:GO:0035556	InterPro:IPR000719	InterPro:Kinase-like_dom_sf	EntrezGene:LOC100254246	wikigene:LOC100254246	PFAM:PF07714
PIRSF:PIRSF000654	PRINTS:PR00109	ScanProsite:PS00107	ScanProsite:PS00108	PFscan:PS50011	PANTHER:PTHR44258
PANTHER:PTHR44258:SF2	InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS	SMART:SM00220	SUPFAM:SSF56112	InterPro:Ser-Thr/Tyr_kinase_cat_dom
InterPro:Ser/Thr_kinase_AS	UniParc:UPI00015C9C9E	ArrayExpress:VIT_14s0066g00370	EnsemblPlantsGene:VIT_14s0066g00370	EnsemblPlants:VIT_14s0066g00370.t01	unigene:Vvi.15593
RefSeq:XP_002272486	RefSeq:XP_002272486.1	SEG:seg	:	:	:

Description

No Description!

Coordinates

chr14:-:26886985..26893383

Molecular Weight (calculated)

39535.8 Da

IEP (calculated)

7.370

GRAVY (calculated)

-0.263

Length

352 amino acids

Sequence
(BLAST)

001: MGSGNGFYES EEFNLDAKWL VDPKLLFVGP RIGEGAHAKV YEGKYKNQNV AIKIVHRGET PEEIAKREGR FAREVAMLSR VQHKNLVKFI GACKEPVMVI
101: VTELLLGGTL RKYLLNLRPR CLDTKVAVGF ALDIARAMEC LHSHGIIHRD LKPENLILTA DHKTVKLADF GLAREESLTE MMTAETGTYR WMAPELYSTV
201: TLRHGEKKHY NHKVDAYSFA IVLWELVHNK LPFEGMSNLQ AAYAAAFKNM RPSAEDLPED LALIVTSCWK EDPNTRPNFS QIIQMLLHYL STISPPEPMV
301: PPRVFTSENA VLPPESPGTS SLMAVRDGSG ETPKTSMETN PRGCFSCFNH CY

Best Arabidopsis Sequence Match ( AT3G27560.1 )
(BLAST)

001: MGSASGFYSN EEFELDPKWL VDPRHLFVGP KIGEGAHAKV YEGKYRNQTV AIKIIKRGES PEEIAKRDNR FAREIAMLSK VQHKNLVKFI GACKEPMMVI
101: VTELLLGGTL RKYLVSLRPK RLDIRLAVGF ALDIARAMEC LHSHGIIHRD LKPENLILSA DHKTVKLADF GLAREESLTE MMTAETGTYR WMAPELYSTV
201: TLRQGEKKHY NHKVDAYSFA IVLWELILNK LPFEGMSNLQ AAYAAAFKNL RPSAEDLPGD LEMIVTSCWK EDPNERPNFT EIIQMLLRYL TTVSAPQIIP
301: PPNRRVFSSE NIVLSPESPG TCSLMSVRDG DVSRQTVNTA DSSEKQTKGS FFSCCS

Arabidopsis Description

ATN1AT3g27560/MMJ24_11 [Source:UniProtKB/TrEMBL;Acc:Q9LT56]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.