CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 2
mitochondrion 1
cytoskeleton 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytoskeleton
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra025286.1-P	Field mustard	cytosol	99.44	99.44
AT3G27560.1	Thale cress	cytosol	93.82	93.82
CDX83708	Canola	cytosol	94.1	92.03
CDY36362	Canola	cytosol	83.99	85.67
CDY42570	Canola	cytosol	83.99	85.67
VIT_14s0066g00370.t01	Wine grape	cytosol	78.93	79.83
Solyc02g093410.2.1	Tomato	cytosol	78.93	79.6
PGSC0003DMT400032824	Potato	cytosol	78.65	79.32
KRG93193	Soybean	cytosol	68.82	78.78
KRH56528	Soybean	cytosol	76.12	78.32
KRG94025	Soybean	cytosol	75.56	77.3
KRH07131	Soybean	cytosol	75.56	77.08
CDY34048	Canola	cytosol	73.88	74.93
CDY64638	Canola	cytosol	73.88	74.93
GSMUA_Achr6P06670_001	Banana	cytosol	73.31	74.15
KXG27334	Sorghum	cytosol	71.07	73.76
Zm00001d050947_P007	Maize	cytosol	73.03	73.65
TraesCS6A01G208500.1	Wheat	cytosol	72.19	73.43
Os02t0594100-01	Rice	cytosol	72.47	73.3
TraesCS6D01G192100.1	Wheat	cytosol	71.91	73.14
HORVU6Hr1G053310.1	Barley	cytosol	72.19	73.01
TraesCS6B01G237600.2	Wheat	cytosol	72.19	72.6
GSMUA_Achr9P01860_001	Banana	cytosol	71.35	72.36
GSMUA_AchrUn_...	Banana	cytosol	42.98	71.83
EES05353	Sorghum	cytosol	70.79	71.59
GSMUA_AchrUn_...	Banana	cytosol	30.9	70.51
CDY04825	Canola	cytosol	55.9	59.4
CDY53853	Canola	cytosol	43.26	38.69
CDY30760	Canola	cytosol	42.7	38.19
CDX81373	Canola	cytosol	42.42	38.13
CDY57129	Canola	cytosol	42.13	37.88
CDY55245	Canola	cytosol	37.08	32.35
CDY63734	Canola	cytosol, plastid	34.27	31.61
CDY19547	Canola	mitochondrion	34.27	31.52
CDY12945	Canola	mitochondrion	34.27	31.44
CDY08153	Canola	mitochondrion	34.27	31.36
CDY03279	Canola	mitochondrion	34.27	31.28
CDY28247	Canola	cytosol	36.24	31.23
CDX68725	Canola	cytosol	36.24	31.23
CDY23284	Canola	cytosol	35.67	31.05
CDY36453	Canola	cytosol	35.67	31.05
CDY39795	Canola	mitochondrion	33.99	31.03
CDX72296	Canola	cytosol	35.39	30.81
CDY13414	Canola	cytosol	35.39	30.81
CDY20306	Canola	cytosol	35.11	30.49
CDY55246	Canola	plasma membrane, vacuole	35.39	28.83
CDY46142	Canola	mitochondrion	35.67	27.73
CDX99086	Canola	cytosol, plastid	31.18	24.94
CDY02848	Canola	cytosol	31.74	23.49
CDX86103	Canola	cytosol	30.62	23.39
CDX80321	Canola	cytosol	30.9	23.16
CDY32674	Canola	cytosol, plastid	31.46	22.95
CDX71145	Canola	cytosol, plastid	30.34	22.78
CDY32673	Canola	cytosol	30.62	22.71
CDX88676	Canola	cytosol, plastid	30.34	22.59
CDY69707	Canola	cytosol, plastid	30.62	22.06
CDY70078	Canola	cytosol	32.58	21.85
CDX90274	Canola	cytosol	33.15	20.49
CDY12083	Canola	cytosol	33.15	20.49
CDY52799	Canola	cytosol	32.87	20.38
CDY07831	Canola	cytosol	31.74	20.0
CDY29191	Canola	cytosol	31.18	19.61
CDY20807	Canola	cytosol	30.9	19.4
CDY30351	Canola	cytosol	31.46	18.86
CDY61898	Canola	cytosol	28.65	18.78
CDY26822	Canola	cytosol	31.46	18.73
CDY38150	Canola	cytosol	28.65	18.68
CDY41632	Canola	plastid	31.74	17.77
CDY24360	Canola	cytosol	1.69	17.65
CDY34777	Canola	cytosol	37.08	16.1
CDY24361	Canola	cytosol	21.07	15.92

Protein Annotations

Gene3D:1.10.510.10	MapMan:18.4.1.30	Gene3D:3.30.200.20	GO:A0A078FMY4	UniProt:A0A078FMY4	EnsemblPlants:CDY13723
ProteinID:CDY13723	ProteinID:CDY13723.1	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004672
GO:GO:0004674	GO:GO:0005488	GO:GO:0005524	GO:GO:0006464	GO:GO:0006468	GO:GO:0008150
GO:GO:0008152	GO:GO:0009987	GO:GO:0016301	GO:GO:0016310	GO:GO:0016740	GO:GO:0019538
EnsemblPlantsGene:GSBRNA2T00078148001	InterPro:IPR000719	InterPro:Kinase-like_dom_sf	PFAM:PF07714	PIRSF:PIRSF000654	PRINTS:PR00109
ScanProsite:PS00107	ScanProsite:PS00108	PFscan:PS50011	PANTHER:PTHR44258	PANTHER:PTHR44258:SF2	InterPro:Prot_kinase_dom
InterPro:Protein_kinase_ATP_BS	SMART:SM00220	SUPFAM:SSF56112	InterPro:Ser-Thr/Tyr_kinase_cat_dom	InterPro:Ser/Thr_kinase_AS	UniParc:UPI0004EDC47D
SEG:seg	:	:	:	:	:

Description

BnaA06g32000DBnaA06g32000D protein [Source:UniProtKB/TrEMBL;Acc:A0A078FMY4]

Coordinates

chrLK032037:-:769066..771440

Molecular Weight (calculated)

39950.4 Da

IEP (calculated)

8.555

GRAVY (calculated)

-0.237

Length

356 amino acids

Sequence
(BLAST)

001: MGSASGFYSN EGFELDPKWL VDPRHLFVGP KIGEGAHAKV YEGKYRNQTV AIKIIKRGES PEEIAKRDSR FAREIAMLSK VQHKNLVKFI GACKEPMMVI
101: VTELLLGGTL RKYLVSLRPK RLDIRLAVAF ALDIARAMEC LHSHGIIHRD LKPENLILSA DHKTVKLADF GLAREESLTE MMTAETGTYR WMAPELYSTV
201: TLRHGEKKHY NHKVDAYSFA IVLWELILNK LPFEGMSNLQ AAYAAAFKNL RPSADDLPGE LGLIVTSCWK EDPNERPNFT EIIQMLLRYL STVSPPQIVP
301: PPVRRVFSSE NVVFSPESPG TCSLMNVRDK DGSGQKVNAA DSSEKETKGS FFFCCS

Best Arabidopsis Sequence Match ( AT3G27560.1 )
(BLAST)

001: MGSASGFYSN EEFELDPKWL VDPRHLFVGP KIGEGAHAKV YEGKYRNQTV AIKIIKRGES PEEIAKRDNR FAREIAMLSK VQHKNLVKFI GACKEPMMVI
101: VTELLLGGTL RKYLVSLRPK RLDIRLAVGF ALDIARAMEC LHSHGIIHRD LKPENLILSA DHKTVKLADF GLAREESLTE MMTAETGTYR WMAPELYSTV
201: TLRQGEKKHY NHKVDAYSFA IVLWELILNK LPFEGMSNLQ AAYAAAFKNL RPSAEDLPGD LEMIVTSCWK EDPNERPNFT EIIQMLLRYL TTVSAPQIIP
301: PPNRRVFSSE NIVLSPESPG TCSLMSVRDG DVSRQTVNTA DSSEKQTKGS FFSCCS

Arabidopsis Description

ATN1AT3g27560/MMJ24_11 [Source:UniProtKB/TrEMBL;Acc:Q9LT56]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.