CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 2
mitochondrion 1
cytoskeleton 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytoskeleton, cytosol, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytoskeleton
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY13723	Canola	cytosol	92.03	94.1
AT3G27560.1	Thale cress	cytosol	87.36	89.33
CDY42570	Canola	cytosol	79.12	82.52
CDY36362	Canola	cytosol	79.12	82.52
VIT_14s0066g00370.t01	Wine grape	cytosol	75.82	78.41
Solyc02g093410.2.1	Tomato	cytosol	74.73	77.05
KRG93193	Soybean	cytosol	65.66	76.85
PGSC0003DMT400032824	Potato	cytosol	74.45	76.77
KRH56528	Soybean	cytosol	71.98	75.72
KRG94025	Soybean	cytosol	71.15	74.43
KRH07131	Soybean	cytosol	71.15	74.21
CDY34048	Canola	cytosol	70.33	72.93
CDY64638	Canola	cytosol	70.33	72.93
TraesCS6A01G208500.1	Wheat	cytosol	68.68	71.43
KXG27334	Sorghum	cytosol	67.31	71.43
Zm00001d050947_P007	Maize	cytosol	69.23	71.39
GSMUA_Achr6P06670_001	Banana	cytosol	68.96	71.31
TraesCS6D01G192100.1	Wheat	cytosol	68.41	71.14
HORVU6Hr1G053310.1	Barley	cytosol	68.68	71.02
Os02t0594100-01	Rice	cytosol	68.68	71.02
GSMUA_Achr9P01860_001	Banana	cytosol	68.41	70.94
TraesCS6B01G237600.2	Wheat	cytosol	68.68	70.62
GSMUA_AchrUn_...	Banana	cytosol	29.95	69.87
EES05353	Sorghum	cytosol	67.31	69.6
GSMUA_AchrUn_...	Banana	cytosol	39.84	68.08
CDY04825	Canola	cytosol	53.3	57.91
CDY53853	Canola	cytosol	41.21	37.69
CDY30760	Canola	cytosol	40.66	37.19
CDX81373	Canola	cytosol	40.38	37.12
CDY57129	Canola	cytosol	40.38	37.12
CDY55245	Canola	cytosol	35.44	31.62
CDY63734	Canola	cytosol, plastid	32.97	31.09
CDY19547	Canola	mitochondrion	32.97	31.01
CDY12945	Canola	mitochondrion	32.97	30.93
CDY08153	Canola	mitochondrion	32.97	30.85
CDY03279	Canola	mitochondrion	32.97	30.77
CDX68725	Canola	cytosol	34.89	30.75
CDY28247	Canola	cytosol	34.89	30.75
CDY36453	Canola	cytosol	34.34	30.56
CDY23284	Canola	cytosol	34.34	30.56
CDY39795	Canola	mitochondrion	32.69	30.51
CDX72296	Canola	cytosol	34.07	30.32
CDY13414	Canola	cytosol	34.07	30.32
CDY20306	Canola	cytosol	33.79	30.0
CDY55246	Canola	plasma membrane, vacuole	34.07	28.38
CDY46142	Canola	mitochondrion	34.07	27.07
CDX99086	Canola	cytosol, plastid	30.49	24.94
CDY02848	Canola	cytosol	31.32	23.7
CDX86103	Canola	cytosol	29.95	23.39
CDX80321	Canola	cytosol	30.22	23.16
CDY32674	Canola	cytosol, plastid	31.04	23.16
CDX71145	Canola	cytosol, plastid	29.67	22.78
CDY32673	Canola	cytosol	29.95	22.71
CDX88676	Canola	cytosol, plastid	29.67	22.59
CDY69707	Canola	cytosol, plastid	29.95	22.06
CDY70078	Canola	cytosol	31.87	21.85
CDY52799	Canola	cytosol	31.59	20.03
CDX90274	Canola	cytosol	31.59	19.97
CDY12083	Canola	cytosol	31.59	19.97
CDY07831	Canola	cytosol	30.77	19.82
CDY29191	Canola	cytosol	30.22	19.43
CDY20807	Canola	cytosol	29.67	19.05
CDY30351	Canola	cytosol	30.49	18.69
CDY61898	Canola	cytosol	27.75	18.6
CDY26822	Canola	cytosol	30.49	18.56
CDY38150	Canola	cytosol	27.47	18.32
CDY41632	Canola	plastid	30.77	17.61
CDY24361	Canola	cytosol	20.6	15.92
CDY34777	Canola	cytosol	35.71	15.85
CDY24360	Canola	cytosol	1.1	11.76

Protein Annotations

Gene3D:1.10.510.10	MapMan:18.4.1.30	Gene3D:3.30.200.20	GO:A0A078D8Q0	EnsemblPlants:CDX83708	ProteinID:CDX83708
ProteinID:CDX83708.1	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004672	GO:GO:0005488
GO:GO:0005524	GO:GO:0006464	GO:GO:0006468	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987
GO:GO:0016301	GO:GO:0016740	GO:GO:0019538	EnsemblPlantsGene:GSBRNA2T00139414001	InterPro:IPR000719	InterPro:Kinase-like_dom_sf
PFAM:PF07714	PIRSF:PIRSF000654	PRINTS:PR00109	ScanProsite:PS00107	ScanProsite:PS00108	PFscan:PS50011
PANTHER:PTHR44258	PANTHER:PTHR44258:SF2	InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS	SMART:SM00220	SUPFAM:SSF56112
InterPro:Ser-Thr/Tyr_kinase_cat_dom	InterPro:Ser/Thr_kinase_AS	UniParc:UPI0004EE33ED	SEG:seg	:	:

Description

BnaC07g24480D

Coordinates

chrLK031833:-:1731918..1734283

Molecular Weight (calculated)

41147.9 Da

IEP (calculated)

9.028

GRAVY (calculated)

-0.272

Length

364 amino acids

Sequence
(BLAST)

001: MGSASGFYSN EGFELDPKWL VDPRHLFVGP KIGEGAHAKV YEGKYRNQTV AIKIIKRGES PEEIAKRDSR FAREIAMLSK VQHKNLVKFI GACKEPMMVI
101: VTELLLGGTL RKYLVSLRPK RLDIRLAVAF ALDIARAMEC LHSHGIIHRD LKPENLILSA DHKTVKLADF GLAREESLTE MMTAETGTYR WMAPELYSTV
201: TLRHGEKKHY NHKVDAYSFA IVLWELILNK LPFEGMSNLQ AAYAAAFKNL RPSAEDLPGE LGLIVTSCWK EDPNERPNFT EIIQMLLRYL STVSPPQIVP
301: PPVRRVFSSE NVVFSPDSPG TCSLMNVREK DGSGNGEEVF VVWNDINSKE LRSHENRRTI KVKV

Best Arabidopsis Sequence Match ( AT3G27560.1 )
(BLAST)

001: MGSASGFYSN EEFELDPKWL VDPRHLFVGP KIGEGAHAKV YEGKYRNQTV AIKIIKRGES PEEIAKRDNR FAREIAMLSK VQHKNLVKFI GACKEPMMVI
101: VTELLLGGTL RKYLVSLRPK RLDIRLAVGF ALDIARAMEC LHSHGIIHRD LKPENLILSA DHKTVKLADF GLAREESLTE MMTAETGTYR WMAPELYSTV
201: TLRQGEKKHY NHKVDAYSFA IVLWELILNK LPFEGMSNLQ AAYAAAFKNL RPSAEDLPGD LEMIVTSCWK EDPNERPNFT EIIQMLLRYL TTVSAPQIIP
301: PPNRRVFSSE NIVLSPESPG TCSLMSVRDG DVSRQTVNTA DSSEKQTKGS FFSCCS

Arabidopsis Description

ATN1AT3g27560/MMJ24_11 [Source:UniProtKB/TrEMBL;Acc:Q9LT56]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.