Skip to main content
crop-pal logo
Canola
Search for another protein from :
Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: plastid, cytosol

Predictor Summary:
  • nucleus 2
  • plastid 2
  • cytosol 2
  • mitochondrion 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol, plastid
Any Predictor:cytosol, nucleus, plastid
BaCelLo:nucleus
ChloroP:plastid
MultiLoc:cytosol
PProwler:mitochondrion
TargetP:plastid
WoLF PSORT:nucleus
YLoc:cytosol
PPI

Inferred distinct locusB in Crop

locusBlocations
CDX72718
CDX73866
CDX90305
CDX92969
CDX94878
CDY01038
CDY08511
CDY12116
CDY22394
CDY35484
CDY40829
CDY56601

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT5G58950.1 CDX73866 AT3G11590.1 21798944
AT5G58950.1 CDY01038 AT3G11590.1 21798944
AT5G58950.1 CDY08511 AT3G11590.1 21798944
AT5G58950.1 CDY56601 AT3G11590.1 21798944
AT5G58950.1 CDX92969 AT3G22960.1 21798944
AT5G58950.1 CDX94878 AT3G22960.1 21798944
AT5G58950.1 CDY35484 AT3G22960.1 21798944
AT5G58950.1 CDY40829 AT3G22960.1 21798944
AT5G58950.1 CDX72718 AT4G39050.1 21798944
AT5G58950.1 CDX90305 AT4G39050.1 21798944
AT5G58950.1 CDY12116 AT4G39050.1 21798944
AT5G58950.1 CDY22394 AT4G39050.1 21798944
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDX88676 Canola cytosol, plastid 98.95 98.12
Bra006738.1-P Field mustard cytosol, plastid 98.73 93.04
CDY32673 Canola cytosol 88.19 87.08
CDY32674 Canola cytosol, plastid 89.45 86.89
CDY02848 Canola cytosol 87.55 86.28
CDX80321 Canola cytosol 82.91 82.74
CDY69707 Canola cytosol, plastid 85.23 81.78
AT5G58950.1 Thale cress plastid 90.08 81.33
Solyc02g078140.2.1 Tomato cytosol 63.92 60.12
PGSC0003DMT400076363 Potato cytosol 63.71 59.92
CDX99086 Canola cytosol, plastid 55.49 59.1
PGSC0003DMT400033356 Potato cytosol, plastid 60.13 58.88
Solyc03g006400.2.1 Tomato cytosol 59.49 58.75
CDX86103 Canola cytosol 57.17 58.15
GSMUA_Achr9P05820_001 Banana cytosol 53.16 51.01
KRH43461 Soybean cytosol 35.02 50.61
KRH13899 Soybean cytosol 34.81 50.3
KRH13893 Soybean cytosol 34.81 50.3
OQU87530 Sorghum cytosol 38.4 48.02
KRH27396 Soybean cytosol 27.0 47.23
GSMUA_Achr2P15610_001 Banana cytosol 56.54 45.66
GSMUA_Achr4P30980_001 Banana cytosol 55.49 45.58
GSMUA_Achr10P... Banana cytosol 53.59 45.28
Os01t0201200-01 Rice nucleus 49.16 41.39
TraesCS3D01G140700.1 Wheat cytosol 48.52 41.07
TraesCS3B01G158300.1 Wheat nucleus 48.52 41.07
CDY63734 Canola cytosol, plastid 33.12 40.67
KXG31606 Sorghum cytosol 48.73 40.38
TraesCS3A01G313600.1 Wheat cytosol 47.68 40.36
CDY19547 Canola mitochondrion 32.7 40.05
CDY12945 Canola mitochondrion 32.49 39.69
Zm00001d008875_P001 Maize cytosol 46.62 39.39
Zm00001d039427_P002 Maize cytosol 47.68 39.37
CDY08153 Canola mitochondrion 32.28 39.33
CDY39795 Canola mitochondrion 32.28 39.23
HORVU3Hr1G026870.1 Barley cytosol 47.47 39.06
CDY03279 Canola mitochondrion 32.07 38.97
KXG22364 Sorghum cytosol 49.37 38.49
Zm00001d032310_P001 Maize cytosol 48.52 38.46
TraesCS3D01G273200.1 Wheat cytosol 48.73 38.44
TraesCS3A01G274000.1 Wheat cytosol 48.73 38.44
TraesCS3B01G307700.2 Wheat cytosol 48.52 38.27
HORVU3Hr1G071240.2 Barley cytosol 48.31 38.04
Os05t0519200-02 Rice cytosol 47.89 37.58
OQU80422 Sorghum cytosol 49.37 37.56
Zm00001d000396_P001 Maize cytosol 46.2 37.24
TraesCS1B01G351900.1 Wheat nucleus 46.84 37.12
TraesCS1A01G339600.1 Wheat cytosol 46.84 37.0
TraesCS1D01G341600.1 Wheat nucleus 46.62 36.96
HORVU1Hr1G076110.1 Barley nucleus 46.41 36.61
Os01t0747400-01 Rice cytosol 48.95 36.42
CDY13414 Canola cytosol 30.59 35.45
CDX72296 Canola cytosol 30.59 35.45
CDY23284 Canola cytosol 30.59 35.45
CDY36453 Canola cytosol 30.38 35.21
Zm00001d038809_P008 Maize cytosol 49.16 35.09
CDX68725 Canola cytosol 30.17 34.62
CDY28247 Canola cytosol 30.17 34.62
CDY55245 Canola cytosol 29.54 34.31
GSMUA_Achr6P26170_001 Banana cytosol 53.16 33.78
CDY04825 Canola cytosol 23.84 33.73
CDY20306 Canola cytosol 28.69 33.17
CDY55246 Canola plasma membrane, vacuole 30.17 32.72
CDY34048 Canola cytosol 24.05 32.48
CDY64638 Canola cytosol 24.05 32.48
CDY36362 Canola cytosol 23.0 31.23
CDY42570 Canola cytosol 23.0 31.23
CDY13723 Canola cytosol 22.78 30.34
CDY46142 Canola mitochondrion 29.11 30.13
CDX83708 Canola cytosol 22.78 29.67
CDY53853 Canola cytosol 22.57 26.88
CDY57129 Canola cytosol 22.36 26.77
CDY30760 Canola cytosol 22.15 26.38
CDX81373 Canola cytosol 21.94 26.26
CDY70078 Canola cytosol 29.11 25.99
CDY52799 Canola cytosol 29.96 24.74
CDX90274 Canola cytosol 29.32 24.13
CDY12083 Canola cytosol 29.32 24.13
CDY07831 Canola cytosol 27.43 23.01
CDY61898 Canola cytosol 26.16 22.84
CDY29191 Canola cytosol 27.22 22.79
CDY38150 Canola cytosol 26.16 22.71
CDY20807 Canola cytosol 27.0 22.57
CDY30351 Canola cytosol 27.85 22.22
CDY26822 Canola cytosol 27.85 22.07
CDY41632 Canola plastid 27.85 20.75
CDY24361 Canola cytosol 19.41 19.53
CDY34777 Canola cytosol 29.96 17.32
CDY24360 Canola cytosol 0.84 11.76
Protein Annotations
Gene3D:1.10.510.10MapMan:18.4.1.30Gene3D:3.30.200.20GO:A0A078C2R4EnsemblPlants:CDX71145ProteinID:CDX71145
ProteinID:CDX71145.1GO:GO:0000166GO:GO:0003674GO:GO:0003824GO:GO:0004672GO:GO:0005488
GO:GO:0005524GO:GO:0006464GO:GO:0006468GO:GO:0008150GO:GO:0008152GO:GO:0009987
GO:GO:0016301GO:GO:0016740GO:GO:0019538EnsemblPlantsGene:GSBRNA2T00141109001InterPro:IPR000719InterPro:Kinase-like_dom_sf
PFAM:PF07714PIRSF:PIRSF000615PRINTS:PR00109ScanProsite:PS00108PFscan:PS50011PANTHER:PTHR44581
PANTHER:PTHR44581:SF2InterPro:Prot_kinase_domSMART:SM00220SUPFAM:SSF56112InterPro:Ser-Thr/Tyr_kinase_cat_domInterPro:Ser/Thr_kinase_AS
UniParc:UPI0004EF29D4SEG:seg::::
Description
BnaC03g12290D
Coordinates
chrLK031791:+:3847038..3848908
Molecular Weight (calculated)
53872.7 Da
IEP (calculated)
9.679
GRAVY (calculated)
-0.559
Length
474 amino acids
Sequence
(BLAST)
001: MDEETSSWIR RTKFSHTVSY RLNSSKLASF PLKVNQENTN PVTNKQRSVS PSPQMSLPDV FKEARSERKR FSTPHPRRMD SEKGMKVKLS HKDSFEKRRS
101: FNLRSPSAPI RDLSTLRIQE RVSKSKKDTG WSKLFDNGSG RRVSAAEASE EYRIDMSKLF FGLRFAHGLY SRLYHGKYED KAVAVKLITV PDDDENGCLG
201: ARLEKQFTKE VTLLSRLSHP NVIKFVGAYK DPPVYCVLTE YLPEGSLRSF LHKPENRSLS LKKLIEFALD IARGMEYIHS RRVIHRDLKP ENVLIDEDFQ
301: LKIADFGIAC EEEYCDMLAD DPGTYRWMAP EMIKRKPHGR KADVYSFGLV LWEMVAGAIP YEDMNPIQAA FAVVHKNIRP AVPGDCPAAM KALIEQCWSV
401: APDKRPEFWQ IVKVLEEFED SLEREGCLNL ASNKICKDPR KGLKHWIQKL GPAQGGGSSS SALGGSALPK PKFA
Best Arabidopsis Sequence Match ( AT5G58950.1 )
(BLAST)
001: MDEEATSWIR RAKFSQTVSY RLNSSKLASL PFMINQDKFS GLKAIPQRSS SSSSASSSDP KLVSSNSQTT GDTSSLEAAD VYVVDSEIQT NPVTHKQRSV
101: SPSPQMAVPD VFKEARSERK RFSTPHPRRV ESEKGMKPKL SHKNSFDKRS FNLRSPSGPI RDLGTLRIQE RVKSKKDTGW SKLFDNTGRR VSAVEASEEF
201: RVDMSKLFFG LKFAHGLYSR LYHGKYEDKA VAVKLITVPD DDDNGCLGAR LEKQFTKEVT LLSRLTHPNV IKFVGAYKDP PVYCVLTQYL PEGSLRSFLH
301: KPENRSLPLK KLIEFAIDIA RGMEYIHSRR IIHRDLKPEN VLIDEEFHLK IADFGIACEE EYCDMLADDP GTYRWMAPEM IKRKPHGRKA DVYSFGLVLW
401: EMVAGAIPYE DMNPIQAAFA VVHKNIRPAI PGDCPVAMKA LIEQCWSVAP DKRPEFWQIV KVLEQFAISL EREGNLNLSS SKICKDPRKG LKHWIQKLGP
501: VHAGGGGGSS SSGLGGSALP KPKFA
Arabidopsis Description
At5g58950 [Source:UniProtKB/TrEMBL;Acc:Q9FIL6]
SUBAcon: [plastid]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.