CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 1
mitochondrion 2
cytosol 3
nucleus 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
KRG92440
KRG96225
KRH24392
KRH29374
KRH34357
KRH51475
KRH60786
KRH67971

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G58950.1	KRG96225	AT3G11590.1	21798944
AT5G58950.1	KRH67971	AT3G11590.1	21798944
AT5G58950.1	KRG92440	AT3G22960.1	21798944
AT5G58950.1	KRH34357	AT3G22960.1	21798944
AT5G58950.1	KRH24392	AT4G39050.1	21798944
AT5G58950.1	KRH29374	AT4G39050.1	21798944
AT5G58950.1	KRH51475	AT4G39050.1	21798944
AT5G58950.1	KRH60786	AT4G39050.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH13899	Soybean	cytosol	99.7	99.7
KRH43461	Soybean	cytosol	92.38	92.38
KRH27396	Soybean	cytosol	64.02	77.49
OQU87530	Sorghum	cytosol	46.95	40.63
KRH10889	Soybean	cytosol	57.01	40.48
KRH57063	Soybean	mitochondrion	42.68	39.77
KRH21427	Soybean	cytosol	56.1	39.74
KRH63510	Soybean	mitochondrion	42.99	39.5
KRH36528	Soybean	mitochondrion	45.12	39.26
KRH03300	Soybean	peroxisome	42.68	39.0
KRH11513	Soybean	mitochondrion	44.82	38.89
KRH02003	Soybean	mitochondrion	45.12	38.85
Solyc03g006400.2.1	Tomato	cytosol	56.71	38.75
KRH54406	Soybean	mitochondrion, peroxisome	40.24	38.6
KRH51152	Soybean	mitochondrion	44.82	38.58
PGSC0003DMT400033356	Potato	cytosol, plastid	56.71	38.43
KRH50054	Soybean	cytosol, plastid	57.01	37.55
KRH20446	Soybean	cytosol, plastid	56.4	37.45
KRG93193	Soybean	cytosol	33.54	35.37
Solyc02g078140.2.1	Tomato	cytosol	53.96	35.12
PGSC0003DMT400076363	Potato	cytosol	53.66	34.92
CDX71145	Canola	cytosol, plastid	50.3	34.81
CDY02848	Canola	cytosol	50.91	34.72
GSMUA_Achr9P05820_001	Banana	cytosol	52.13	34.62
CDX80321	Canola	cytosol	50.0	34.53
CDX88676	Canola	cytosol, plastid	50.3	34.52
CDY32674	Canola	cytosol, plastid	51.22	34.43
KRH56528	Soybean	cytosol	36.28	34.39
CDY32673	Canola	cytosol	50.0	34.17
CDX99086	Canola	cytosol, plastid	46.04	33.93
KRH54319	Soybean	cytosol	36.28	33.81
KRG94025	Soybean	cytosol	35.67	33.62
KRH40751	Soybean	cytosol	37.5	33.24
KRH63627	Soybean	cytosol	35.67	33.24
KRH07131	Soybean	cytosol	35.37	33.24
CDY69707	Canola	cytosol, plastid	49.7	33.0
KRH76113	Soybean	cytosol	37.2	32.88
Bra020343.1-P	Field mustard	cytosol, plastid	51.22	32.81
Bra002606.1-P	Field mustard	cytosol, plastid	49.39	32.79
Bra006738.1-P	Field mustard	cytosol, plastid	50.0	32.6
CDX86103	Canola	cytosol	46.04	32.4
KRH65437	Soybean	cytosol	36.28	32.08
AT5G58950.1	Thale cress	plastid	50.61	31.62
Bra018183.1-P	Field mustard	cytosol	45.73	30.74
KRH60100	Soybean	cytosol	38.41	30.29
KRH41382	Soybean	nucleus	37.5	29.57
GSMUA_Achr4P30980_001	Banana	cytosol	51.52	29.29
GSMUA_Achr10P...	Banana	cytosol	49.7	29.06
GSMUA_Achr2P15610_001	Banana	cytosol	51.83	28.96
Os01t0201200-01	Rice	nucleus	49.39	28.77
TraesCS3B01G158300.1	Wheat	nucleus	48.48	28.39
AT3G46930.2	Thale cress	cytosol	44.51	28.35
TraesCS3D01G140700.1	Wheat	cytosol	47.87	28.04
TraesCS3A01G313600.1	Wheat	cytosol	47.87	28.04
Zm00001d039427_P002	Maize	cytosol	47.87	27.35
Zm00001d008875_P001	Maize	cytosol	46.65	27.27
KXG31606	Sorghum	cytosol	47.56	27.27
HORVU3Hr1G026870.1	Barley	cytosol	46.04	26.22
Zm00001d032310_P001	Maize	cytosol	46.34	25.42
HORVU3Hr1G071240.2	Barley	cytosol	46.65	25.42
KXG22364	Sorghum	cytosol	46.95	25.33
Os05t0519200-02	Rice	cytosol	46.34	25.17
TraesCS3A01G274000.1	Wheat	cytosol	46.04	25.12
TraesCS1B01G351900.1	Wheat	nucleus	45.73	25.08
Zm00001d000396_P001	Maize	cytosol	44.82	25.0
TraesCS1A01G339600.1	Wheat	cytosol	45.73	25.0
TraesCS1D01G341600.1	Wheat	nucleus	45.43	24.92
TraesCS3D01G273200.1	Wheat	cytosol	45.43	24.79
HORVU1Hr1G076110.1	Barley	nucleus	45.12	24.63
TraesCS3B01G307700.2	Wheat	cytosol	45.12	24.63
OQU80422	Sorghum	cytosol	46.34	24.4
Os01t0747400-01	Rice	cytosol	46.04	23.7
KRH08313	Soybean	cytosol	28.66	23.68
Zm00001d038809_P008	Maize	cytosol	47.26	23.34
GSMUA_Achr6P26170_001	Banana	cytosol	50.61	22.25
KRG91637	Soybean	cytosol	33.54	19.75
KRH35162	Soybean	cytosol	34.76	19.55
KRH76579	Soybean	cytosol	33.84	19.44
KRH36118	Soybean	cytosol	33.23	18.63
KRH60972	Soybean	cytosol	30.18	18.61
KRG90640	Soybean	plastid	32.93	18.52
KRH28871	Soybean	cytosol	32.93	17.42

Protein Annotations

Gene3D:1.10.510.10	EntrezGene:100782673	MapMan:18.4.1.30	Gene3D:3.30.200.20	EMBL:ACUP02009798	EnsemblPlantsGene:GLYMA_15G270700
GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004672	GO:GO:0004871	GO:GO:0005488
GO:GO:0005524	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0006464
GO:GO:0006468	GO:GO:0007154	GO:GO:0007165	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987
GO:GO:0016301	GO:GO:0016740	GO:GO:0019538	GO:GO:0035556	InterPro:IPR000719	UniProt:K7ME59
EnsemblPlants:KRH13893	ProteinID:KRH13893	ProteinID:KRH13893.1	InterPro:Kinase-like_dom_sf	PFAM:PF07714	PIRSF:PIRSF000654
PRINTS:PR00109	ScanProsite:PS00108	PFscan:PS50011	PANTHER:PTHR44581	InterPro:Prot_kinase_dom	SMART:SM00220
SUPFAM:SSF56112	InterPro:Ser-Thr/Tyr_kinase_cat_dom	InterPro:Ser/Thr_kinase_AS	UniParc:UPI00029485D9	:	:

Description

hypothetical protein

Coordinates

chr15:+:50786688..50787674

Molecular Weight (calculated)

37653.9 Da

IEP (calculated)

9.817

GRAVY (calculated)

-0.353

Length

328 amino acids

Sequence
(BLAST)

001: MGKLSIKLHD KCKNRKESSS WPLTKCFQHG SGRDDAIGIT QEWGIDFSNL FIGHKFSQGA HSQIYHGIYK KEHAAVKFVK VRYNDQKGIP KSLLEAQFLR
101: EVTHLPRLHH QNVVKFIGAH KDTDFYCILT EYQQKGSLRV YLNKLESKPI SLKRVIDFAL DIARGMEYIH AQGIIHRDLK PENVLVDGEI RLKIADFGIA
201: CEASKCDSLR GTYRWMAPEM IKGKRYGRKV DVYSFGLILW ELVSGTVPFE GLSPIQVAVA VADRNSRPII PSHCPHVLSD LIKQCWELKP EKRPEFCQIV
301: RVLEQLDQGC SFLPPKKLKQ HPLSLRKW

Best Arabidopsis Sequence Match ( AT1G62400.1 )
(BLAST)

001: MSGLCFNPFR LRWSLRSKLP LEPSLPNLPC NPSSSKTNRY AEAETMEKKR FDSMESWSMI LESENVETWE ASKGEREEWT ADLSQLFIGN KFASGAHSRI
101: YRGIYKQRAV AVKMVRIPTH KEETRAKLEQ QFKSEVALLS RLFHPNIVQF IAACKKPPVY CIITEYMSQG NLRMYLNKKE PYSLSIETVL RLALDISRGM
201: EYLHSQGVIH RDLKSNNLLL NDEMRVKVAD FGTSCLETQC REAKGNMGTY RWMAPEMIKE KPYTRKVDVY SFGIVLWELT TALLPFQGMT PVQAAFAVAE
301: KNERPPLPAS CQPALAHLIK RCWSENPSKR PDFSNIVAVL EKYDECVKEG LPLTSHASLT KTKKAILDHL KGCVTSISSP FSSSSVPVNA

Arabidopsis Description

HT1Serine/threonine-protein kinase HT1 [Source:UniProtKB/Swiss-Prot;Acc:Q2MHE4]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.