CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 2
cytosol 2
mitochondrion 1
cytoskeleton 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytoskeleton, cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	cytoskeleton
YLoc:	cytosol

nucleus: 21132161

msms PMID: 21132161 doi

B Cooper, KB Campbell, J Feng, WM Garrett, R Frederick

Soybean Genomics and Improvement Laboratory, USDA-ARS, Beltsville, MD 20705, USA. bret.cooper@ars.usda.gov

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH60100	Soybean	cytosol	98.08	98.08
VIT_11s0065g00140.t01	Wine grape	cytosol	87.5	88.78
Solyc07g042680.2.1	Tomato	cytosol	82.21	83.01
Solyc07g042890.2.1	Tomato	cytosol	81.49	82.28
GSMUA_Achr1P23740_001	Banana	cytosol	70.43	81.39
AT2G24360.1	Thale cress	cytosol	78.61	79.56
Zm00001d026267_P002	Maize	cytosol	78.85	79.04
EES12824	Sorghum	cytosol	78.61	78.99
Zm00001d002371_P001	Maize	cytosol	78.61	78.8
CDX72296	Canola	cytosol	77.4	78.73
CDY13414	Canola	cytosol	77.4	78.73
Bra024020.1-P	Field mustard	cytosol	77.16	78.48
CDY23284	Canola	cytosol	77.16	78.48
CDY36453	Canola	cytosol	77.16	78.48
GSMUA_Achr10P...	Banana	cytosol	77.4	78.35
Bra010247.1-P	Field mustard	cytosol	76.92	78.24
Bra007860.1-P	Field mustard	cytosol, plastid	76.92	78.24
Bra011250.1-P	Field mustard	cytosol	77.64	78.21
CDY28247	Canola	cytosol	77.64	78.21
Os04t0608900-01	Rice	cytosol, plasma membrane	79.33	78.2
Bra007859.1-P	Field mustard	cytosol	76.2	78.08
CDX68725	Canola	cytosol	77.16	77.72
CDY55245	Canola	cytosol	76.2	77.7
PGSC0003DMT400007578	Potato	cytosol	74.52	77.5
AT4G31170.5	Thale cress	cytosol	76.68	77.43
GSMUA_Achr4P20740_001	Banana	cytosol	70.91	77.23
GSMUA_Achr7P15770_001	Banana	cytosol	77.4	77.22
Solyc12g009340.1.1	Tomato	cytosol	74.04	77.0
GSMUA_Achr7P04900_001	Banana	cytosol	76.68	76.68
CDY20306	Canola	cytosol	75.48	76.59
GSMUA_Achr6P03680_001	Banana	cytosol	76.92	76.56
Os08t0224100-01	Rice	cytosol	76.2	76.02
PGSC0003DMT400007577	Potato	cytosol	67.79	76.01
TraesCS7A01G292800.1	Wheat	cytosol	75.48	75.48
TraesCS7D01G289500.1	Wheat	cytosol	75.24	75.24
HORVU7Hr1G068410.1	Barley	cytosol	75.24	75.24
TraesCS7B01G182600.1	Wheat	cytosol	75.0	75.0
Zm00001d024338_P006	Maize	cytosol	75.96	74.7
Zm00001d049361_P004	Maize	cytosol	75.72	74.47
EES13540	Sorghum	cytosol	74.28	74.1
CDY55246	Canola	plasma membrane, vacuole	76.92	73.23
Solyc12g016100.1.1	Tomato	cytosol	45.67	73.08
Solyc12g009350.1.1	Tomato	cytosol	45.67	73.08
Solyc12g016060.1.1	Tomato	cytosol	33.41	72.4
Solyc12g016140.1.1	Tomato	cytosol	39.66	71.43
Solyc12g015980.1.1	Tomato	cytosol	44.47	71.15
EES06353	Sorghum	cytosol	71.88	70.85
PGSC0003DMT400007574	Potato	cytosol	52.4	70.1
HORVU7Hr1G109640.1	Barley	cytosol	71.39	69.88
TraesCS6A01G155200.2	Wheat	cytosol	70.19	69.86
TraesCS6D01G145100.2	Wheat	cytosol	70.19	69.86
TraesCS7D01G474700.1	Wheat	cytosol	71.15	69.65
HORVU6Hr1G031440.1	Barley	cytosol	70.43	69.6
Os02t0174200-01	Rice	plasma membrane	70.43	69.6
TraesCS7B01G391300.1	Wheat	cytosol	70.91	69.41
Os06t0663400-01	Rice	cytosol, plasma membrane	71.39	69.39
TraesCS7A01G488200.1	Wheat	cytosol	71.15	69.32
TraesCS6B01G183300.1	Wheat	cytosol	70.43	68.78
CDY46142	Canola	mitochondrion	74.52	67.69
Zm00001d053770_P001	Maize	cytosol	56.01	66.01
KXG24726	Sorghum	vacuole	73.32	57.77
KRH57063	Soybean	mitochondrion	35.1	41.48
KRH03300	Soybean	peroxisome	35.34	40.95
KRH54406	Soybean	mitochondrion, peroxisome	33.65	40.94
KRH63510	Soybean	mitochondrion	35.1	40.9
CDY34777	Canola	cytosol	76.44	38.78
KRH02003	Soybean	mitochondrion	34.38	37.53
KRH13893	Soybean	cytosol	29.57	37.5
Bra032102.1-P	Field mustard	cytosol	75.0	37.41
KRH36528	Soybean	mitochondrion	33.89	37.4
KRH11513	Soybean	mitochondrion	33.89	37.3
KRH51152	Soybean	mitochondrion	34.13	37.27
KRH13899	Soybean	cytosol	29.33	37.2
KRH43461	Soybean	cytosol	29.09	36.89
KRH27396	Soybean	cytosol	23.56	36.16
KRH07131	Soybean	cytosol	29.81	35.53
KRG93193	Soybean	cytosol	26.44	35.37
KRG94025	Soybean	cytosol	29.57	35.34
KRH56528	Soybean	cytosol	29.33	35.26
KRH54319	Soybean	cytosol	29.57	34.94
KRH65437	Soybean	cytosol	30.77	34.5
KRH63627	Soybean	cytosol	29.09	34.38
KRH40751	Soybean	cytosol	30.53	34.32
KRH76113	Soybean	cytosol	30.53	34.23
KRH10889	Soybean	cytosol	36.54	32.9
KRH21427	Soybean	cytosol	36.54	32.83
KRH50054	Soybean	cytosol, plastid	36.54	30.52
KRH20446	Soybean	cytosol, plastid	36.06	30.36
KRH76579	Soybean	cytosol	36.06	26.27
KRG91637	Soybean	cytosol	34.86	26.03
KRH60972	Soybean	cytosol	33.17	25.94
KRH35162	Soybean	cytosol	35.58	25.39
KRH28871	Soybean	cytosol	36.06	24.19
KRG90640	Soybean	plastid	33.89	24.19
KRH36118	Soybean	cytosol	33.89	24.1
KRH08313	Soybean	cytosol	21.15	22.17

Protein Annotations

Gene3D:1.10.510.10	EntrezGene:100788536	MapMan:18.4.1.30	Gene3D:3.30.200.20	EMBL:ACUP02004761	EnsemblPlantsGene:GLYMA_08G026500
GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004672	GO:GO:0004871	GO:GO:0005488
GO:GO:0005524	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0006464	GO:GO:0006468
GO:GO:0007154	GO:GO:0007165	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016301
GO:GO:0016740	GO:GO:0019538	GO:GO:0035556	UniProt:I1KPP1	InterPro:IPR000719	ProteinID:KRH41381.1
EnsemblPlants:KRH41382	ProteinID:KRH41382	ProteinID:KRH41382.1	InterPro:Kinase-like_dom_sf	PFAM:PF07714	PIRSF:PIRSF000615
PRINTS:PR00109	ScanProsite:PS00108	PFscan:PS50011	PANTHER:PTHR23257	PANTHER:PTHR23257:SF618	InterPro:Prot_kinase_dom
SMART:SM00220	SUPFAM:SSF56112	InterPro:Ser-Thr/Tyr_kinase_cat_dom	InterPro:Ser/Thr_kinase_AS	UniParc:UPI0002337F43	:

Description

hypothetical protein

Coordinates

chr8:-:2093436..2099108

Molecular Weight (calculated)

46633.2 Da

IEP (calculated)

7.557

GRAVY (calculated)

-0.325

Length

416 amino acids

Sequence
(BLAST)

001: MLEGGAKFPG IIDLNKNNNN YYDFSQGFYH KLGEGTNMSI DSVGSLQTSN GGGSVAMSID NSSVGSNDSH TRMLDHQGLR RRANDNYSVA HSANRRGRVT
101: HALSDDALAQ ALMDNSSPTE GLDNFDEWTI DLRKLNMGEP FAQGAFGKLY RGTYNGEDVA IKILERPEND PAKAQLMEQQ FQQEVMMLAT LKHPNIVRFI
201: GACRKPMVWC IVTEYAKGGS VRQFLMKRQN RSVPLKLAVK QALDVARGMA YVHGLLLIHR DLKSDNLLIF GDKSIKIADF GVARIEVQTE GMTPETGTYR
301: WMAPEMIQHR PYTQKVDVYS FGIVLWELIT GMLPFQNMTA VQAAFAVVNK NVRPIIPNDC LPVLRDIMTR CWDPNPDVRP PFAEIVGMLE NAENEIMTTV
401: RKARFRCCMT QPMTAD

Best Arabidopsis Sequence Match ( AT4G31170.7 )
(BLAST)

001: MLENPKFDLH AVGNHNNDNN YYAFTQDFYQ KLGEEGTNMS VDSMQTSNAG GSVSMSVDNS SVGSSDALIG HPGLKPMRHP YSLSDGQSVF RPGKVTHALN
101: DDALAQALMD SKYPTEGLVN YEEWTIDLRK LHMGPAFAQG AFGKLYRGTY NGEDVAIKLL ERSDSNPEKA QALEQQFQQE VSMLAFLKHP NIVRFIGACI
201: KPMVWCIVTE YAKGGSVRQF LTKRQNRAVP LKLAVMQALD VARGMAYVHE RNFIHRDLKS DNLLISADRS IKIADFGVAR IEVQTEGMTP ETGTYRWMAP
301: EMIQHRPYTQ KVDVYSFGIV LWELITGLLP FQNMTAVQAA FAVVNRGVRP TVPADCLPVL GEIMTRCWDA DPEVRPCFAE IVNLLEAAET EIMTNVRKAR
401: FRCCMTQPMT VD

Arabidopsis Description

AT4G31170 protein [Source:UniProtKB/TrEMBL;Acc:Q9M085]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.