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Rice
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane, cytosol

Predictor Summary:
  • nucleus 2
  • cytosol 4
  • mitochondrion 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol, plasma membrane
Any Predictor:cytosol, mitochondrion, nucleus
BaCelLo:nucleus
EpiLoc:cytosol
MultiLoc:cytosol
Plant-mPloc:nucleus
PProwler:mitochondrion
WoLF PSORT:cytosol
YLoc:cytosol
plasma membrane: 27800704
msms PMID: 27800704 doi
J Cao, C Yang, L Li, L Jiang, Y Wu, C Wu, Q Bu, G Xia, X Liu, Y Luo, J Liu
Huai'an Institute of Agricultural Sciences, Huai'an, 223001, China., Institute of Analytical Chemistry and Synthetic and Functional Biomolecules Center, College of Chemistry and Molecular Engineering, Peking University, Beijing, 100871, China; and., Northeast Institute of Geography and Agroecology, Key Laboratory of Soybean Molecular Design Breeding, Chinese Academy of Sciences, Harbin, 150081, China., State Key Laboratory of Plant Genomics, Institute of Microbiology, Chinese Academy of Sciences, Beijing, 100101, China.
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Zm00001d026267_P002 Maize cytosol 91.94 93.49
EES12824 Sorghum cytosol 91.71 93.48
Zm00001d002371_P001 Maize cytosol 91.0 92.53
Os08t0224100-01 Rice cytosol 85.07 86.09
GSMUA_Achr1P23740_001 Banana cytosol 71.8 84.17
GSMUA_Achr4P20740_001 Banana cytosol 74.64 82.46
GSMUA_Achr7P04900_001 Banana cytosol 80.09 81.25
VIT_04s0008g03020.t01 Wine grape cytosol 79.86 80.82
VIT_11s0065g00140.t01 Wine grape cytosol 78.44 80.73
Solyc07g042680.2.1 Tomato cytosol 77.73 79.61
Solyc07g042890.2.1 Tomato cytosol 77.49 79.37
KRH41382 Soybean nucleus 78.2 79.33
KRH60100 Soybean cytosol 77.49 78.61
Bra007860.1-P Field mustard cytosol, plastid 74.41 76.77
AT2G24360.1 Thale cress cytosol 74.64 76.64
CDX72296 Canola cytosol 73.7 76.04
CDY13414 Canola cytosol 73.7 76.04
Bra024020.1-P Field mustard cytosol 73.46 75.79
CDY23284 Canola cytosol 72.99 75.31
CDY36453 Canola cytosol 72.99 75.31
Bra010247.1-P Field mustard cytosol 72.75 75.06
Bra007859.1-P Field mustard cytosol 72.04 74.88
Os02t0174200-01 Rice plasma membrane 74.64 74.82
Bra011250.1-P Field mustard cytosol 72.99 74.58
CDY28247 Canola cytosol 72.99 74.58
CDY55245 Canola cytosol 72.04 74.51
AT4G31170.5 Thale cress cytosol 72.51 74.27
CDX68725 Canola cytosol 72.51 74.09
PGSC0003DMT400007578 Potato cytosol 70.14 74.0
Os06t0663400-01 Rice cytosol, plasma membrane 74.88 73.83
CDY20306 Canola cytosol 71.56 73.66
Solyc12g009340.1.1 Tomato cytosol 69.67 73.5
PGSC0003DMT400007577 Potato cytosol 64.45 73.32
CDY55246 Canola plasma membrane, vacuole 74.17 71.62
Solyc12g016060.1.1 Tomato cytosol 31.99 70.31
Solyc12g016100.1.1 Tomato cytosol 43.13 70.0
Solyc12g009350.1.1 Tomato cytosol 43.13 70.0
Solyc12g016140.1.1 Tomato cytosol 37.68 68.83
Solyc12g015980.1.1 Tomato cytosol 42.18 68.46
PGSC0003DMT400007574 Potato cytosol 47.87 64.95
CDY46142 Canola mitochondrion 70.38 64.85
Os07t0203925-00 Rice cytosol 23.93 43.16
CDY34777 Canola cytosol 72.27 37.2
Os03t0816100-01 Rice cytosol 24.88 36.71
Os06t0636600-01 Rice plastid 34.36 36.43
Os02t0594100-01 Rice cytosol 30.09 36.08
Bra032102.1-P Field mustard cytosol 70.14 35.49
Os03t0588400-00 Rice cytosol 27.96 33.52
Os07t0475900-01 Rice cytosol, plasma membrane 32.94 29.14
Os12t0163800-01 Rice cytosol 35.55 28.14
Os06t0724900-01 Rice cytosol, plasma membrane 34.12 25.53
Os04t0686650-00 Rice cytosol 27.96 25.49
Os09t0544300-01 Rice plasma membrane 34.36 24.05
Os02t0120100-01 Rice plasma membrane 32.7 23.67
Os01t0201200-01 Rice nucleus 31.52 23.62
Os05t0519200-02 Rice cytosol 33.65 23.51
Os01t0747400-01 Rice cytosol 30.81 20.41
Os01t0107400-01 Rice cytosol, nucleus 0.71 5.08
Os07t0475800-01 Rice nucleus 0.71 1.03
Protein Annotations
Gene3D:1.10.510.10MapMan:18.4.1.30Gene3D:3.30.200.20EntrezGene:4336935EMBL:AK111698EMBL:AY156511
ProteinID:BAF15732.1ProteinID:BAS90928.1ProteinID:CAE03651.2ProteinID:EAZ31928.1GO:GO:0000166GO:GO:0003674
GO:GO:0003824GO:GO:0004672GO:GO:0004674GO:GO:0004871GO:GO:0005488GO:GO:0005524
GO:GO:0005575GO:GO:0005622GO:GO:0005623GO:GO:0006464GO:GO:0006468GO:GO:0007154
GO:GO:0007165GO:GO:0008150GO:GO:0008152GO:GO:0009987GO:GO:0016301GO:GO:0016310
GO:GO:0016740GO:GO:0019538GO:GO:0035556InterPro:IPR000719InterPro:Kinase-like_dom_sfEnsemblPlantsGene:Os04g0608900
EnsemblPlants:Os04t0608900-01PFAM:PF07714PIRSF:PIRSF000615PRINTS:PR00109ScanProsite:PS00108PFscan:PS50011
PANTHER:PTHR23257PANTHER:PTHR23257:SF581InterPro:Prot_kinase_domUniProt:Q8GV29SMART:SM00220SUPFAM:SSF56112
InterPro:Ser-Thr/Tyr_kinase_cat_domInterPro:Ser/Thr_kinase_ASUniParc:UPI000005EE9DRefSeq:XP_015636112.1SEG:seg:
Description
dual-specificity protein kinase 4Similar to Serine/thronine protein kinase-like protein. (Os04t0608900-01)
Coordinates
chr4:-:30825563..30829578
Molecular Weight (calculated)
46589.6 Da
IEP (calculated)
7.860
GRAVY (calculated)
-0.149
Length
422 amino acids
Sequence
(BLAST)
001: MVEGPKFAGM MGGVVGGAGG HDDIGGNFCD MAYYRKLGES SNMSIDSLNS LQTSTHGGGS VAMSVDNSSV GSSDSHTRML NHPGLRGHVA ANYSVGHSIF
101: RPGRVSHALS EDALARALMD PRYPTETLKD YEEWTIDLGK LHMGMPFAQG AFGKLYKGTY NGEDVAIKLL ERPEADPERA GLMEQQFVQE VMMLATLRHP
201: NIVKFIGACR KPMVWCIVTE YAKGGSVRQF LMKRQNRSVP LKLAVKQALD VARGMAYVHA LGFIHRDLKS DNLLISGDKS IKIADFGVAR IEVKTEGMTP
301: ETGTYRWMAP EMIQHRPYDQ KVDVYSFGIV LWELITGMLP FANMTAVQAA FAVVNKGVRP AIPQDCLPVL SEIMTRCWDP NPDVRPPFTE VVRMLEHAEV
401: VILSTVRKAR FRCCISQPMT TD
Best Arabidopsis Sequence Match ( AT2G24360.1 )
(BLAST)
001: MLEGAKFNVL AVGNHHNNDN NYYAFTQEFY QKLNEGSNMS MESMQTSNAG GSVSMSVDNS SVGSSDALIG HPGLKPVRHY SLSVGQSVFR PGRVTHALND
101: DALAQALMDT RYPTEGLTNY DEWTIDLRKL NMGPAFAQGA FGKLYKGTYN GEDVAIKILE RPENSPEKAQ FMEQQFQQEV SMLANLKHPN IVRFIGACRK
201: PMVWCIVTEY AKGGSVRQFL TRRQNRAVPL KLAVKQALDV ARGMAYVHGR NFIHRDLKSD NLLISADKSI KIADFGVARI EVQTEGMTPE TGTYRWMAPE
301: MIQHRAYNQK VDVYSFGIVL WELITGLLPF QNMTAVQAAF AVVNRGVRPT VPNDCLPVLS DIMTRCWDAN PEVRPCFVEV VKLLEAAETE IMTTARKARF
401: RCCLSQPMTI D
Arabidopsis Description
STY13Serine/threonine-protein kinase STY13 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZQ31]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.